3X2H - JenaLib

Title :   X-RAY STRUCTURE OF PCCEL45A N92D WITH CELLOPENTAOSE AT 95K.

Authors :   A. Nakamura, T. Ishida, M. Samejima, K. Igarashi

Date :   22 Dec 14 (Deposition) - 07 Oct 15 (Release) - 07 Oct 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   0.99

Chains :   Asym./Biol. Unit : A

Keywords :   Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. Nakamura, T. Ishida, K. Kusaka, T. Yamada, S. Fushinobu, I. Tanaka, S. Kaneko, K. Ohta, H. Tanaka, K. Inaka, Y. Higuchi, N. Niimura, M. Samejima, K. Igarashi
Newton S Cradle Proton Relay With Amide Imidic Acid Tautomerization In Inverting Cellulase Visualized By Neutro Crystallography
Sci Adv V. 1 00263 2015
PubMed: search | Reference-DOI: 10.1126/SCIADV.1500263

Compounds

Molecule 1 - ENDOGLUCANASE V-LIKE PROTEIN
	Chains	:	A
	Engineered	:	YES
	Expression System	:	PICHIA PASTORIS
	Expression System Plasmid	:	PPICZA
	Expression System Strain	:	KM71H
	Expression System Taxid	:	4922
	Expression System Vector Type	:	PLASMID
	Fragment	:	UNP RESIDUES 27-206
	Gene	:	EGV, PCCEL45A
	Mutation	:	YES
	Organism Common	:	WHITE-ROT FUNGUS
	Organism Scientific	:	PHANEROCHAETE CHRYSOSPORIUM
	Organism Taxid	:	5306
	Strain	:	K-3

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 10)

Sites (10, 10)

Asymmetric Unit (10, 10)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLY A:22 , SER A:23 , SER A:68 , BGC A:202 , HOH A:373 , HOH A:422 , HOH A:427 , HOH A:440 , HOH A:451	BINDING SITE FOR RESIDUE GLC A 201
02	AC2	SOFTWARE	SER A:23 , ASP A:65 , TYR A:67 , SER A:68 , GLY A:129 , GLC A:201 , BGC A:203 , HOH A:374 , HOH A:504	BINDING SITE FOR RESIDUE BGC A 202
03	AC3	SOFTWARE	TYR A:67 , GLY A:129 , HIS A:130 , GLY A:131 , ALA A:132 , BGC A:202 , BGC A:204 , HOH A:358	BINDING SITE FOR RESIDUE BGC A 203
04	AC4	SOFTWARE	THR A:16 , MET A:17 , TYR A:67 , PHE A:95 , GLY A:131 , BGC A:203 , BGC A:205 , HOH A:453	BINDING SITE FOR RESIDUE BGC A 204
05	AC5	SOFTWARE	THR A:16 , MET A:17 , TYR A:18 , ASP A:92 , ASP A:114 , BGC A:204 , CE5 A:207 , HOH A:338 , HOH A:426 , HOH A:436 , HOH A:458 , HOH A:475	BINDING SITE FOR RESIDUE BGC A 205
06	AC6	SOFTWARE	THR A:16 , MET A:17 , TYR A:18 , GLY A:22 , SER A:23 , ASP A:65 , TYR A:67 , SER A:68 , ASP A:92 , PHE A:95 , ASP A:114 , GLY A:129 , HIS A:130 , GLY A:131 , ALA A:132 , CE5 A:207 , HOH A:338 , HOH A:373 , HOH A:374 , HOH A:422 , HOH A:426 , HOH A:436 , HOH A:440 , HOH A:453 , HOH A:458 , HOH A:475	BINDING SITE FOR RESIDUE CE5 A 206
07	AC7	SOFTWARE	TYR A:18 , SER A:23 , PRO A:24 , ALA A:25 , ALA A:36 , PRO A:46 , GLY A:47 , LEU A:48 , GLY A:49 , ASP A:85 , LEU A:86 , CYS A:87 , PRO A:88 , ASP A:92 , ASP A:114 , TRP A:154 , ASN A:155 , BGC A:205 , CE5 A:206 , HOH A:350 , HOH A:370 , HOH A:423 , HOH A:442 , HOH A:462 , HOH A:482 , HOH A:497 , HOH A:502	BINDING SITE FOR RESIDUE CE5 A 207
08	AC8	SOFTWARE	GLN A:8 , ALA A:9 , ASN A:70 , TRP A:167 , HOH A:307 , HOH A:331 , HOH A:367 , HOH A:403	BINDING SITE FOR RESIDUE 40S A 208
09	AC9	SOFTWARE	PHE A:75 , GLN A:77 , ALA A:123 , LYS A:124 , PHE A:126 , HOH A:344	BINDING SITE FOR RESIDUE 40S A 209
10	BC1	SOFTWARE	ALA A:29 , ALA A:30 , THR A:138 , HOH A:360 , HOH A:388 , HOH A:431	BINDING SITE FOR RESIDUE 40S A 210

SS Bonds (5, 5)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:180
                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhh....eeeeeeeee...............eeeeehhhhh.............eeeeeeee..............eeeeeeeee....hhhhhh.............eeeeee...hhhhhhh......eeeeeeeehhhhh.............hhhhhh................ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3x2h A   1 ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGDQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS 180
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180

Legend:		→ Mismatch	(orange background)
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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (0, 0)

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		Trp A:167 - Pro A:168	[ RasMol ]

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