3V5I - JenaLib

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5ia      _ A: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhh....ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i A   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain B from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5ib      _ B: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i B   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain C from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5ic      _ C: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i C   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain D from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5id      _ D: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i D   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain E from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5ie      _ E: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i E   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain F from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5if      _ F: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i F   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain G from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5ig      _ G: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i G   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain H from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5ih      _ H: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhh....ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i H   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain I from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5ii      _ I: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhh....ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i I   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain J from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5ij      _ J: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhh....ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i J   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain K from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5ik      _ K: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i K   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain L from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5il      _ L: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i L   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain M from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5im      _ M: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhh....ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i M   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain N from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5in      _ N: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhh....ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i N   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain O from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5io      _ O: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhh....ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i O   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain P from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5ip      _ P: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhh....ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i P   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain Q from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5iq      _ Q: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhh....ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i Q   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain R from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5ir      _ R: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i R   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain S from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5is      _ S: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhh....ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i S   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain T from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5it      _ T: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhh....ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i T   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain U from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5iu      _ U: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i U   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain V from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5iv      _ V: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i V   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain W from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5iw      _ W: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i W   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain X from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5ix      _ X: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhh....ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i X   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain Y from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5iy      _ Y: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i Y   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain Z from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains d3v5iz      _ Z: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i Z   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain a from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i a   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Chain b from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_STAA8 | Q2G036 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:190
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
           CLPP_STAA8     4 IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee..------..eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v5i b   4 IPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE 193
                                 |   -  |     23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193
                                 9     16

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 56)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 26)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (6, 6)

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