Asymmetric Unit(hide GO term definitions)
Chain A,D,G ( NUP82_YEAST | P40368)
| molecular function |
|---|
| | GO:0005515 | | protein binding | | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
| | GO:0017056 | | structural constituent of nuclear pore | | The action of a molecule that contributes to the structural integrity of the nuclear pore complex. |
| | GO:0005215 | | transporter activity | | Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells. |
| biological process |
|---|
| | GO:0006406 | | mRNA export from nucleus | | The directed movement of mRNA from the nucleus to the cytoplasm. |
| | GO:0051028 | | mRNA transport | | The directed movement of mRNA, messenger ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| | GO:0006611 | | protein export from nucleus | | The directed movement of a protein from the nucleus into the cytoplasm. |
| | GO:0006606 | | protein import into nucleus | | The directed movement of a protein from the cytoplasm to the nucleus. |
| | GO:0015031 | | protein transport | | The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| | GO:0000055 | | ribosomal large subunit export from nucleus | | The directed movement of a ribosomal large subunit from the nucleus into the cytoplasm. |
| | GO:0000056 | | ribosomal small subunit export from nucleus | | The directed movement of a ribosomal small subunit from the nucleus into the cytoplasm. |
| | GO:0006810 | | transport | | The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein. |
| cellular component |
|---|
| | GO:0005829 | | cytosol | | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| | GO:0016020 | | membrane | | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| | GO:0031965 | | nuclear membrane | | Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space. |
| | GO:0005643 | | nuclear pore | | Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined. |
| | GO:0044614 | | nuclear pore cytoplasmic filaments | | Filamentous extensions on cytoplasmic face of the nuclear pore complex (NPC). In S. cerevisiae, Nup159p, Nup82p, and Nup42p contribute to the cytoplasmic filaments. In vertebrates, Nup358 is a major component. |
| | GO:0044612 | | nuclear pore linkers | | A substructure of the nuclear pore complex (NPC) that serves to connect members of the central transport channel (composed of FG-nucleoporins) to the core scaffold (composed of the inner and outer NPC rings). In S. cerevisiae, the linkers are Nic96p and Nup82p. In vertebrates, they are Nup93 and Nup88. Components are arranged in 8-fold symmetrical 'spokes' around the central transport channel. Both linkers can be isolated in association with specific FG-nucleoporins, complexes that are sometimes referred to as the Nic96 complex (Nic96p-Nsp1p-Nup49p-Nup57p) and the Nup82 complex (Nup82p-Nup116p-Nup159p-Gle2p). |
| | GO:0005634 | | nucleus | | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
Chain B,E,H ( NU159_YEAST | P40477)
| molecular function |
|---|
| | GO:0000774 | | adenyl-nucleotide exchange factor activity | | Stimulates the hydrolysis and exchange of adenyl nucleotides by other proteins. |
| | GO:0005487 | | nucleocytoplasmic transporter activity | | Enables the directed movement of substances between the nucleus and the cytoplasm of a cell. |
| | GO:0005515 | | protein binding | | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
| biological process |
|---|
| | GO:0006607 | | NLS-bearing protein import into nucleus | | The directed movement of a protein bearing a nuclear localization signal (NLS) from the cytoplasm into the nucleus, across the nuclear membrane. |
| | GO:0051028 | | mRNA transport | | The directed movement of mRNA, messenger ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| | GO:0097064 | | ncRNA export from nucleus | | The directed movement of a non-coding RNA transcript (ncRNA) from the nucleus to the cytoplasm. |
| | GO:0031081 | | nuclear pore distribution | | Any process that establishes the spatial arrangement of nuclear pores within the nuclear envelope. |
| | GO:0016973 | | poly(A)+ mRNA export from nucleus | | The directed movement of poly(A)+ mRNA out of the nucleus into the cytoplasm. |
| | GO:0006611 | | protein export from nucleus | | The directed movement of a protein from the nucleus into the cytoplasm. |
| | GO:0015031 | | protein transport | | The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| | GO:0050790 | | regulation of catalytic activity | | Any process that modulates the activity of an enzyme. |
| | GO:0000055 | | ribosomal large subunit export from nucleus | | The directed movement of a ribosomal large subunit from the nucleus into the cytoplasm. |
| | GO:0000056 | | ribosomal small subunit export from nucleus | | The directed movement of a ribosomal small subunit from the nucleus into the cytoplasm. |
| | GO:0006810 | | transport | | The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein. |
| cellular component |
|---|
| | GO:0016020 | | membrane | | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| | GO:0031965 | | nuclear membrane | | Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space. |
| | GO:0005643 | | nuclear pore | | Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined. |
| | GO:0044613 | | nuclear pore central transport channel | | The central substructure of the nuclear pore complex (NPC), through which nucleocytoplasmic transport of RNAs, proteins and small molecules occurs. The central transport channel is filled with FG-nucleoporins, which form a selective barrier and provide a series of binding sites for transporter proteins. Characterized S. cerevisiae FG-nucleoporins include Nup159p, Nup145Np, Nup116p, Nup100p, Nsp1p, Nup57p, Nup49p, Nup42p, Nup53p, Nup59p/Asm4p, Nup60p and Nup1. Characterized vertebrate FG-nucleoporins include Nup214, Nup98, Nup62, Nup54, Nup58/45, NLP1, and Nup153. |
| | GO:0044614 | | nuclear pore cytoplasmic filaments | | Filamentous extensions on cytoplasmic face of the nuclear pore complex (NPC). In S. cerevisiae, Nup159p, Nup82p, and Nup42p contribute to the cytoplasmic filaments. In vertebrates, Nup358 is a major component. |
| | GO:0005634 | | nucleus | | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
Chain C,F,I ( NUP98_MOUSE | Q6PFD9)
| molecular function |
|---|
| | GO:0003723 | | RNA binding | | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
| | GO:0008139 | | nuclear localization sequence binding | | Interacting selectively and non-covalently with a nuclear localization sequence, a specific peptide sequence that acts as a signal to localize the protein within the nucleus. |
| | GO:0005487 | | nucleocytoplasmic transporter activity | | Enables the directed movement of substances between the nucleus and the cytoplasm of a cell. |
| | GO:0017056 | | structural constituent of nuclear pore | | The action of a molecule that contributes to the structural integrity of the nuclear pore complex. |
| biological process |
|---|
| | GO:0006260 | | DNA replication | | The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA. |
| | GO:0006405 | | RNA export from nucleus | | The directed movement of RNA from the nucleus to the cytoplasm. |
| | GO:0051028 | | mRNA transport | | The directed movement of mRNA, messenger ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| | GO:0051292 | | nuclear pore complex assembly | | The aggregation, arrangement and bonding together of a set of components to form a nuclear pore complex. |
| | GO:0000973 | | posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery | | The chromosome organization process in which the DNA sequence containing a gene transcribed by RNA polymerase II is maintained in a specific location at the nuclear periphery even after transcription has been repressed. |
| | GO:0006606 | | protein import into nucleus | | The directed movement of a protein from the cytoplasm to the nucleus. |
| | GO:0015031 | | protein transport | | The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| | GO:0034398 | | telomere tethering at nuclear periphery | | The process in which a telomere is maintained in a specific location at the nuclear periphery. |
| | GO:0006810 | | transport | | The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein. |
| cellular component |
|---|
| | GO:0000776 | | kinetochore | | A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules. |
| | GO:0016020 | | membrane | | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| | GO:0005635 | | nuclear envelope | | The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space). |
| | GO:0042405 | | nuclear inclusion body | | An intranuclear focus at which aggregated proteins have been sequestered. |
| | GO:0031965 | | nuclear membrane | | Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space. |
| | GO:0034399 | | nuclear periphery | | The portion of the nuclear lumen proximal to the inner nuclear membrane. |
| | GO:0005643 | | nuclear pore | | Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined. |
| | GO:0044614 | | nuclear pore cytoplasmic filaments | | Filamentous extensions on cytoplasmic face of the nuclear pore complex (NPC). In S. cerevisiae, Nup159p, Nup82p, and Nup42p contribute to the cytoplasmic filaments. In vertebrates, Nup358 is a major component. |
| | GO:0044615 | | nuclear pore nuclear basket | | A filamentous, cage-like assembly on the nuclear face of the nuclear pore complex (NPC). In S. cerevisiae, Mlp1p and Mlp2p are two major components of the NPC nuclear basket. In vertebrates, Tpr is a major component. |
| | GO:0031080 | | nuclear pore outer ring | | A subcomplex of the nuclear pore complex (NPC) that forms the outer rings of the core scaffold, a lattice-like structure that gives the NPC its shape and strength. In S. cerevisiae, the two outer rings each contain multiple copies of the following proteins: Nup133p, Nup120p, Nup145Cp, Nup85p, Nup84p, Seh1p, and Sec13p. In vertebrates, the two outer rings each contain multiple copies of the following proteins: Nup133, Nup160, Nup96, Nup75, Nup107, Seh1, Sec13, Nup43, Nup37, and ALADIN. Components are arranged in 8-fold symmetrical 'spokes' around the central transport channel. A single 'spoke', can be isolated and is sometimes referred to as the Nup84 complex (S. cerevisiae) or the Nup107-160 complex (vertebrates). |
| | GO:0005634 | | nucleus | | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
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Description
