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(-) Description

Title :  HUMAN ALPHA-HAEMOGLOBIN COMPLEXED WITH THE FIRST NEAT DOMAIN OF ISDH FROM STAPHYLOCOCCUS AUREUS
 
Authors :  K. K. Kumar, D. A. Jacques, T. T. Caradoc-Davies, J. M. Guss, D. A. Gell
Date :  19 May 11  (Deposition) - 23 May 12  (Release) - 20 Aug 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.05
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,D  (1x)
Biol. Unit 2:  B,C  (1x)
Keywords :  Haemoglobin, Neat Domain, Isdh, Protein-Protein Complex, Host- Pathogen Interaction, Oxygen Transport-Protein Binding Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  K. Krishna Kumar, D. A. Jacques, J. M. Guss, D. A. Gell
The Structure Of Alpha-Haemoglobin In Complex With A Haemoglobin-Binding Domain From Staphylococcus Aureus Reveals The Elusive Alpha-Haemoglobin Dimerization Interfac
Acta Crystallogr. , Sect. F V. 70 1032 2014
PubMed-ID: 25084376  |  Reference-DOI: 10.1107/S2053230X14012175

(-) Compounds

Molecule 1 - IRON-REGULATED SURFACE DETERMINANT PROTEIN H
    ChainsA, B
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET11A
    Expression System StrainBL21(DE3)
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentFIRST NEAT DOMAIN
    GeneISDH
    Organism ScientificSTAPHYLOCOCCUS AUREUS
    Organism Taxid282459
    StrainMSSA476
    SynonymISDH, HAPTOGLOBIN RECEPTOR A, STAPHYLOCOCCUS AUREUS SURFACE PROTEIN I
 
Molecule 2 - HEMOGLOBIN SUBUNIT ALPHA
    ChainsD, C
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymALPHA-GLOBIN, HEMOGLOBIN ALPHA CHAIN
    TissueBLOOD

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit ABCD
Biological Unit 1 (1x)A  D
Biological Unit 2 (1x) BC 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
1HEM2Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR D:39 , TYR D:42 , PHE D:43 , HIS D:58 , LYS D:61 , LEU D:66 , LEU D:83 , HIS D:87 , LEU D:91 , VAL D:93 , ASN D:97 , PHE D:98 , LEU D:101 , HOH D:501BINDING SITE FOR RESIDUE HEM D 500
2AC2SOFTWARELYS A:119 , TYR C:42 , PHE C:43 , HIS C:45 , HIS C:58 , ALA C:65 , LEU C:66 , LEU C:83 , HIS C:87 , LEU C:91 , VAL C:93 , ASN C:97 , PHE C:98 , LEU C:101 , LEU C:136 , HOH C:501BINDING SITE FOR RESIDUE HEM C 500

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3S48)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Asp A:133 -Pro A:134
2Val A:178 -Pro A:179
3Asp B:133 -Pro B:134
4Val B:178 -Pro B:179

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (142, 282)

Asymmetric Unit (142, 282)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
001UniProtVAR_002719V2EHBA_HUMANPolymorphism33981821DV1E
002UniProtVAR_002720L3RHBA_HUMANPolymorphism36030576C/DL2R
003UniProtVAR_002721A6DHBA_HUMANPolymorphism34090856C/DA5D
004UniProtVAR_002722A6PHBA_HUMANPolymorphism34751764C/DA5P
005UniProtVAR_002723D7AHBA_HUMANPolymorphism33986902C/DD6A
006UniProtVAR_002724D7GHBA_HUMANPolymorphism281864805C/DD6G
007UniProtVAR_002725D7NHBA_HUMANPolymorphism33961916C/DD6N
008UniProtVAR_002726D7VHBA_HUMANPolymorphism281864805C/DD6V
009UniProtVAR_002727D7YHBA_HUMANPolymorphism281864806C/DD6Y
010UniProtVAR_002728K8EHBA_HUMANPolymorphism34817956C/DK7E
011UniProtVAR_038149N10THBA_HUMANPolymorphism281860608C/DN9T
012UniProtVAR_014605V11FHBA_HUMANPolymorphism1799896C/DV10F
013UniProtVAR_002729K12EHBA_HUMANPolymorphism33938574C/DK11E
014UniProtVAR_002730A13DHBA_HUMANPolymorphism35615982C/DA12D
015UniProtVAR_038150A14PHBA_HUMANPolymorphism35331909C/DA13P
016UniProtVAR_002731W15RHBA_HUMANPolymorphism33964317C/DW14R
017UniProtVAR_002732G16RHBA_HUMANPolymorphism35816645C/DG15R
018UniProtVAR_002733K17MHBA_HUMANPolymorphism35210126C/DK16M
019UniProtVAR_002734K17NHBA_HUMANPolymorphism33923844C/DK16N
020UniProtVAR_002735G19DHBA_HUMANPolymorphism35993097C/DG18D
021UniProtVAR_002736G19RHBA_HUMANPolymorphism34504387C/DG18R
022UniProtVAR_002737A20DHBA_HUMANUnclassified  ---C/DA19D
023UniProtVAR_002738A20EHBA_HUMANPolymorphism35628685C/DA19E
024UniProtVAR_002739H21QHBA_HUMANPolymorphism41525149C/DH20Q
025UniProtVAR_002740H21RHBA_HUMANPolymorphism33943087C/DH20R
026UniProtVAR_002741A22DHBA_HUMANPolymorphism11548605C/DA21D
027UniProtVAR_002742A22PHBA_HUMANPolymorphism34324664C/DA21P
028UniProtVAR_002743G23DHBA_HUMANPolymorphism34608326C/DG22D
029UniProtVAR_002744E24GHBA_HUMANPolymorphism33939421C/DE23G
030UniProtVAR_002745E24KHBA_HUMANPolymorphism281864819C/DE23K
031UniProtVAR_002746Y25HHBA_HUMANPolymorphism281864821C/DY24H
032UniProtVAR_002747A27EHBA_HUMANPolymorphism281864822C/DA26E
033UniProtVAR_025387A27VHBA_HUMANPolymorphism281864822C/DA26V
034UniProtVAR_002748E28DHBA_HUMANPolymorphism281865556C/DE27D
035UniProtVAR_002749E28GHBA_HUMANPolymorphism281864823C/DE27G
036UniProtVAR_002750E28VHBA_HUMANPolymorphism281864823C/DE27V
037UniProtVAR_002751E31KHBA_HUMANPolymorphism111033605C/DE30K
038UniProtVAR_025002R32KHBA_HUMANPolymorphism281864543C/DR31K
039UniProtVAR_002752R32SHBA_HUMANPolymorphism111033606C/DR31S
040UniProtVAR_002753L35RHBA_HUMANPolymorphism281864825C/DL34R
041UniProtVAR_002754P38RHBA_HUMANPolymorphism281864826C/DP37R
042UniProtVAR_002756K41MHBA_HUMANPolymorphism281864828C/DK40M
043UniProtVAR_002757T42SHBA_HUMANPolymorphism281860623C/DT41S
044UniProtVAR_002758F44LHBA_HUMANPolymorphism41491146C/DF43L
045UniProtVAR_002759P45LHBA_HUMANPolymorphism41514946C/DP44L
046UniProtVAR_002760P45RHBA_HUMANPolymorphism281864830C/DP44R
047UniProtVAR_002761H46QHBA_HUMANPolymorphism281860624C/DH45Q
048UniProtVAR_002762H46RHBA_HUMANPolymorphism281864831C/DH45R
049UniProtVAR_002763D48AHBA_HUMANPolymorphism281864833C/DD47A
050UniProtVAR_002764D48GHBA_HUMANPolymorphism281864833C/DD47G
051UniProtVAR_002765D48HHBA_HUMANPolymorphism281864834C/DD47H
052UniProtVAR_002766D48YHBA_HUMANPolymorphism281864834C/DD47Y
053UniProtVAR_002767L49RHBA_HUMANPolymorphism41392146C/DL48R
054UniProtVAR_002768S50RHBA_HUMANPolymorphism41518249C/DS49R
055UniProtVAR_002769H51RHBA_HUMANPolymorphism281864835C/DH50R
056UniProtVAR_002770G52DHBA_HUMANPolymorphism281864836C/DG51D
057UniProtVAR_002771G52RHBA_HUMANPolymorphism281864837C/DG51R
058UniProtVAR_002772A54DHBA_HUMANPolymorphism281864838C/DA53D
059UniProtVAR_002773Q55RHBA_HUMANPolymorphism281864839C/DQ54R
060UniProtVAR_002774K57RHBA_HUMANPolymorphism281864841C/DK56R
061UniProtVAR_002775K57THBA_HUMANPolymorphism281864841C/DK56T
062UniProtVAR_002776G58RHBA_HUMANPolymorphism281864843C/DG57R
063UniProtVAR_025388H59QHBA_HUMANPolymorphism41378349C/DH58Q
064UniProtVAR_002777H59YHBA_HUMANPolymorphism281864845C/DH58Y
065UniProtVAR_002778G60DHBA_HUMANPolymorphism28928878C/DG59D
066UniProtVAR_002779G60VHBA_HUMANPolymorphism281864846C/DG59V
067UniProtVAR_002780K61NHBA_HUMANPolymorphism28928887C/DK60N
068UniProtVAR_002782K62NHBA_HUMANPolymorphism33985574C/DK61N
069UniProtVAR_002783K62THBA_HUMANPolymorphism281865558C/DK61T
070UniProtVAR_002784V63MHBA_HUMANPolymorphism41515649C/DV62M
071UniProtVAR_002785A64DHBA_HUMANPolymorphism281864848C/DA63D
072UniProtVAR_002786D65YHBA_HUMANPolymorphism281864849C/DD64Y
073UniProtVAR_002787N69KHBA_HUMANPolymorphism1060339C/DN68K
074UniProtVAR_002788A72EHBA_HUMANPolymorphism281864853C/DA71E
075UniProtVAR_002789A72VHBA_HUMANPolymorphism281864853C/DA71V
076UniProtVAR_002790H73RHBA_HUMANPolymorphism281864854C/DH72R
077UniProtVAR_002791D75AHBA_HUMANPolymorphism281864856C/DD74A
078UniProtVAR_002792D75GHBA_HUMANPolymorphism33921047C/DD74G
079UniProtVAR_002793D75NHBA_HUMANPolymorphism281864857C/DD74N
080UniProtVAR_002794D76AHBA_HUMANPolymorphism33991223C/DD75A
081UniProtVAR_002795D76HHBA_HUMANPolymorphism281864858C/DD75H
082UniProtVAR_002796M77KHBA_HUMANPolymorphism281864860C/DM76K
083UniProtVAR_002797M77THBA_HUMANPolymorphism281864860C/DM76T
084UniProtVAR_002798P78RHBA_HUMANPolymorphism281864861C/DP77R
085UniProtVAR_002799N79HHBA_HUMANPolymorphism111033602C/DN78H
086UniProtVAR_002800N79KHBA_HUMANPolymorphism281860607C/DN78K
087UniProtVAR_012662A80GHBA_HUMANPolymorphism281860603C/DA79G
088UniProtVAR_002801L81RHBA_HUMANPolymorphism281864863C/DL80R
089UniProtVAR_002802S82CHBA_HUMANPolymorphism281864864C/DS81C
090UniProtVAR_002803A83DHBA_HUMANPolymorphism281864865C/DA82D
091UniProtVAR_002804S85RHBA_HUMANPolymorphism281860612C/DS84R
092UniProtVAR_002805D86VHBA_HUMANPolymorphism41331747C/DD85V
093UniProtVAR_002806D86YHBA_HUMANPolymorphism281864777C/DD85Y
094UniProtVAR_002807L87RHBA_HUMANPolymorphism281864866C/DL86R
095UniProtVAR_002808H88NHBA_HUMANPolymorphism281864868C/DH87N
096UniProtVAR_002809H88RHBA_HUMANPolymorphism281864867C/DH87R
097UniProtVAR_002810A89SHBA_HUMANPolymorphism281864869C/DA88S
098UniProtVAR_002811K91MHBA_HUMANPolymorphism281864873C/DK90M
099UniProtVAR_049272L92FHBA_HUMANPolymorphism17407508C/DL91F
100UniProtVAR_002812L92PHBA_HUMANPolymorphism17407508C/DL91P
101UniProtVAR_002813R93QHBA_HUMANPolymorphism281864875C/DR92Q
102UniProtVAR_020775R93WHBA_HUMANPolymorphism281864876C/DR92W
103UniProtVAR_025389D95AHBA_HUMANPolymorphism281864879C/DD94A
104UniProtVAR_002814D95YHBA_HUMANPolymorphism281864878C/DD94Y
105UniProtVAR_002815P96AHBA_HUMANPolymorphism281864881C/DP95A
106UniProtVAR_002816P96THBA_HUMANPolymorphism281864881C/DP95T
107UniProtVAR_002817N98KHBA_HUMANPolymorphism41338947C/DN97K
108UniProtVAR_002818K100EHBA_HUMANPolymorphism281864882C/DK99E
109UniProtVAR_002819S103RHBA_HUMANPolymorphism41344646C/DS102R
110UniProtVAR_002820H104RHBA_HUMANPolymorphism63750752C/DH103R
111UniProtVAR_025390H104YHBA_HUMANPolymorphism63750073C/DH103Y
112UniProtVAR_002821L110RHBA_HUMANPolymorphism41479844C/DL109R
113UniProtVAR_002822A111DHBA_HUMANPolymorphism28928889C/DA110D
114UniProtVAR_002823H113DHBA_HUMANPolymorphism281864885C/DH112D
115UniProtVAR_002824L114HHBA_HUMANPolymorphism281860618C/DL113H
116UniProtVAR_002825P115LHBA_HUMANPolymorphism267607269C/DP114L
117UniProtVAR_002826P115RHBA_HUMANPolymorphism267607269C/DP114R
118UniProtVAR_002827P115SHBA_HUMANPolymorphism281864887C/DP114S
119UniProtVAR_002828A116DHBA_HUMANPolymorphism281864888C/DA115D
120UniProtVAR_002829E117AHBA_HUMANPolymorphism281864946C/DE116A
121UniProtVAR_002833A121EHBA_HUMANPolymorphism36075744C/DA120E
122UniProtVAR_002834V122MHBA_HUMANPolymorphism35187567C/DV121M
123UniProtVAR_002835H123QHBA_HUMANPolymorphism41479347C/DH122Q
124UniProtVAR_002836L126PHBA_HUMANPolymorphism41397847C/DL125P
125UniProtVAR_025391L126RHBA_HUMANPolymorphism41397847C/DL125R
126UniProtVAR_025392D127GHBA_HUMANPolymorphism33957766C/DD126G
127UniProtVAR_002837D127VHBA_HUMANPolymorphism33957766C/DD126V
128UniProtVAR_002838D127YHBA_HUMANPolymorphism33933481C/DD126Y
129UniProtVAR_002839K128NHBA_HUMANPolymorphism33972894C/DK127N
130UniProtVAR_002840L130PHBA_HUMANPolymorphism281864889C/DL129P
131UniProtVAR_002842A131DHBA_HUMANPolymorphism41528545C/DA130D
132UniProtVAR_002841A131PHBA_HUMANPolymorphism41529844C/DA130P
133UniProtVAR_002843S132PHBA_HUMANPolymorphism63751417C/DS131P
134UniProtVAR_002844S134RHBA_HUMANPolymorphism41514946C/DS133R
135UniProtVAR_002845V136EHBA_HUMANPolymorphism63749809C/DV135E
136UniProtVAR_002846L137MHBA_HUMANPolymorphism41364652C/DL136M
137UniProtVAR_002847L137PHBA_HUMANPolymorphism41469945C/DL136P
138UniProtVAR_035242L137RHBA_HUMANPolymorphism41469945C/DL136R
139UniProtVAR_002848S139PHBA_HUMANPolymorphism63750801C/DS138P
140UniProtVAR_002849K140EHBA_HUMANPolymorphism41361546C/DK139E
141UniProtVAR_002850K140THBA_HUMANPolymorphism56348461C/DK139T
142UniProtVAR_002851Y141HHBA_HUMANPolymorphism55870409DY140H

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (142, 142)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
001UniProtVAR_002719V2EHBA_HUMANPolymorphism33981821DV1E
002UniProtVAR_002720L3RHBA_HUMANPolymorphism36030576DL2R
003UniProtVAR_002721A6DHBA_HUMANPolymorphism34090856DA5D
004UniProtVAR_002722A6PHBA_HUMANPolymorphism34751764DA5P
005UniProtVAR_002723D7AHBA_HUMANPolymorphism33986902DD6A
006UniProtVAR_002724D7GHBA_HUMANPolymorphism281864805DD6G
007UniProtVAR_002725D7NHBA_HUMANPolymorphism33961916DD6N
008UniProtVAR_002726D7VHBA_HUMANPolymorphism281864805DD6V
009UniProtVAR_002727D7YHBA_HUMANPolymorphism281864806DD6Y
010UniProtVAR_002728K8EHBA_HUMANPolymorphism34817956DK7E
011UniProtVAR_038149N10THBA_HUMANPolymorphism281860608DN9T
012UniProtVAR_014605V11FHBA_HUMANPolymorphism1799896DV10F
013UniProtVAR_002729K12EHBA_HUMANPolymorphism33938574DK11E
014UniProtVAR_002730A13DHBA_HUMANPolymorphism35615982DA12D
015UniProtVAR_038150A14PHBA_HUMANPolymorphism35331909DA13P
016UniProtVAR_002731W15RHBA_HUMANPolymorphism33964317DW14R
017UniProtVAR_002732G16RHBA_HUMANPolymorphism35816645DG15R
018UniProtVAR_002733K17MHBA_HUMANPolymorphism35210126DK16M
019UniProtVAR_002734K17NHBA_HUMANPolymorphism33923844DK16N
020UniProtVAR_002735G19DHBA_HUMANPolymorphism35993097DG18D
021UniProtVAR_002736G19RHBA_HUMANPolymorphism34504387DG18R
022UniProtVAR_002737A20DHBA_HUMANUnclassified  ---DA19D
023UniProtVAR_002738A20EHBA_HUMANPolymorphism35628685DA19E
024UniProtVAR_002739H21QHBA_HUMANPolymorphism41525149DH20Q
025UniProtVAR_002740H21RHBA_HUMANPolymorphism33943087DH20R
026UniProtVAR_002741A22DHBA_HUMANPolymorphism11548605DA21D
027UniProtVAR_002742A22PHBA_HUMANPolymorphism34324664DA21P
028UniProtVAR_002743G23DHBA_HUMANPolymorphism34608326DG22D
029UniProtVAR_002744E24GHBA_HUMANPolymorphism33939421DE23G
030UniProtVAR_002745E24KHBA_HUMANPolymorphism281864819DE23K
031UniProtVAR_002746Y25HHBA_HUMANPolymorphism281864821DY24H
032UniProtVAR_002747A27EHBA_HUMANPolymorphism281864822DA26E
033UniProtVAR_025387A27VHBA_HUMANPolymorphism281864822DA26V
034UniProtVAR_002748E28DHBA_HUMANPolymorphism281865556DE27D
035UniProtVAR_002749E28GHBA_HUMANPolymorphism281864823DE27G
036UniProtVAR_002750E28VHBA_HUMANPolymorphism281864823DE27V
037UniProtVAR_002751E31KHBA_HUMANPolymorphism111033605DE30K
038UniProtVAR_025002R32KHBA_HUMANPolymorphism281864543DR31K
039UniProtVAR_002752R32SHBA_HUMANPolymorphism111033606DR31S
040UniProtVAR_002753L35RHBA_HUMANPolymorphism281864825DL34R
041UniProtVAR_002754P38RHBA_HUMANPolymorphism281864826DP37R
042UniProtVAR_002756K41MHBA_HUMANPolymorphism281864828DK40M
043UniProtVAR_002757T42SHBA_HUMANPolymorphism281860623DT41S
044UniProtVAR_002758F44LHBA_HUMANPolymorphism41491146DF43L
045UniProtVAR_002759P45LHBA_HUMANPolymorphism41514946DP44L
046UniProtVAR_002760P45RHBA_HUMANPolymorphism281864830DP44R
047UniProtVAR_002761H46QHBA_HUMANPolymorphism281860624DH45Q
048UniProtVAR_002762H46RHBA_HUMANPolymorphism281864831DH45R
049UniProtVAR_002763D48AHBA_HUMANPolymorphism281864833DD47A
050UniProtVAR_002764D48GHBA_HUMANPolymorphism281864833DD47G
051UniProtVAR_002765D48HHBA_HUMANPolymorphism281864834DD47H
052UniProtVAR_002766D48YHBA_HUMANPolymorphism281864834DD47Y
053UniProtVAR_002767L49RHBA_HUMANPolymorphism41392146DL48R
054UniProtVAR_002768S50RHBA_HUMANPolymorphism41518249DS49R
055UniProtVAR_002769H51RHBA_HUMANPolymorphism281864835DH50R
056UniProtVAR_002770G52DHBA_HUMANPolymorphism281864836DG51D
057UniProtVAR_002771G52RHBA_HUMANPolymorphism281864837DG51R
058UniProtVAR_002772A54DHBA_HUMANPolymorphism281864838DA53D
059UniProtVAR_002773Q55RHBA_HUMANPolymorphism281864839DQ54R
060UniProtVAR_002774K57RHBA_HUMANPolymorphism281864841DK56R
061UniProtVAR_002775K57THBA_HUMANPolymorphism281864841DK56T
062UniProtVAR_002776G58RHBA_HUMANPolymorphism281864843DG57R
063UniProtVAR_025388H59QHBA_HUMANPolymorphism41378349DH58Q
064UniProtVAR_002777H59YHBA_HUMANPolymorphism281864845DH58Y
065UniProtVAR_002778G60DHBA_HUMANPolymorphism28928878DG59D
066UniProtVAR_002779G60VHBA_HUMANPolymorphism281864846DG59V
067UniProtVAR_002780K61NHBA_HUMANPolymorphism28928887DK60N
068UniProtVAR_002782K62NHBA_HUMANPolymorphism33985574DK61N
069UniProtVAR_002783K62THBA_HUMANPolymorphism281865558DK61T
070UniProtVAR_002784V63MHBA_HUMANPolymorphism41515649DV62M
071UniProtVAR_002785A64DHBA_HUMANPolymorphism281864848DA63D
072UniProtVAR_002786D65YHBA_HUMANPolymorphism281864849DD64Y
073UniProtVAR_002787N69KHBA_HUMANPolymorphism1060339DN68K
074UniProtVAR_002788A72EHBA_HUMANPolymorphism281864853DA71E
075UniProtVAR_002789A72VHBA_HUMANPolymorphism281864853DA71V
076UniProtVAR_002790H73RHBA_HUMANPolymorphism281864854DH72R
077UniProtVAR_002791D75AHBA_HUMANPolymorphism281864856DD74A
078UniProtVAR_002792D75GHBA_HUMANPolymorphism33921047DD74G
079UniProtVAR_002793D75NHBA_HUMANPolymorphism281864857DD74N
080UniProtVAR_002794D76AHBA_HUMANPolymorphism33991223DD75A
081UniProtVAR_002795D76HHBA_HUMANPolymorphism281864858DD75H
082UniProtVAR_002796M77KHBA_HUMANPolymorphism281864860DM76K
083UniProtVAR_002797M77THBA_HUMANPolymorphism281864860DM76T
084UniProtVAR_002798P78RHBA_HUMANPolymorphism281864861DP77R
085UniProtVAR_002799N79HHBA_HUMANPolymorphism111033602DN78H
086UniProtVAR_002800N79KHBA_HUMANPolymorphism281860607DN78K
087UniProtVAR_012662A80GHBA_HUMANPolymorphism281860603DA79G
088UniProtVAR_002801L81RHBA_HUMANPolymorphism281864863DL80R
089UniProtVAR_002802S82CHBA_HUMANPolymorphism281864864DS81C
090UniProtVAR_002803A83DHBA_HUMANPolymorphism281864865DA82D
091UniProtVAR_002804S85RHBA_HUMANPolymorphism281860612DS84R
092UniProtVAR_002805D86VHBA_HUMANPolymorphism41331747DD85V
093UniProtVAR_002806D86YHBA_HUMANPolymorphism281864777DD85Y
094UniProtVAR_002807L87RHBA_HUMANPolymorphism281864866DL86R
095UniProtVAR_002808H88NHBA_HUMANPolymorphism281864868DH87N
096UniProtVAR_002809H88RHBA_HUMANPolymorphism281864867DH87R
097UniProtVAR_002810A89SHBA_HUMANPolymorphism281864869DA88S
098UniProtVAR_002811K91MHBA_HUMANPolymorphism281864873DK90M
099UniProtVAR_049272L92FHBA_HUMANPolymorphism17407508DL91F
100UniProtVAR_002812L92PHBA_HUMANPolymorphism17407508DL91P
101UniProtVAR_002813R93QHBA_HUMANPolymorphism281864875DR92Q
102UniProtVAR_020775R93WHBA_HUMANPolymorphism281864876DR92W
103UniProtVAR_025389D95AHBA_HUMANPolymorphism281864879DD94A
104UniProtVAR_002814D95YHBA_HUMANPolymorphism281864878DD94Y
105UniProtVAR_002815P96AHBA_HUMANPolymorphism281864881DP95A
106UniProtVAR_002816P96THBA_HUMANPolymorphism281864881DP95T
107UniProtVAR_002817N98KHBA_HUMANPolymorphism41338947DN97K
108UniProtVAR_002818K100EHBA_HUMANPolymorphism281864882DK99E
109UniProtVAR_002819S103RHBA_HUMANPolymorphism41344646DS102R
110UniProtVAR_002820H104RHBA_HUMANPolymorphism63750752DH103R
111UniProtVAR_025390H104YHBA_HUMANPolymorphism63750073DH103Y
112UniProtVAR_002821L110RHBA_HUMANPolymorphism41479844DL109R
113UniProtVAR_002822A111DHBA_HUMANPolymorphism28928889DA110D
114UniProtVAR_002823H113DHBA_HUMANPolymorphism281864885DH112D
115UniProtVAR_002824L114HHBA_HUMANPolymorphism281860618DL113H
116UniProtVAR_002825P115LHBA_HUMANPolymorphism267607269DP114L
117UniProtVAR_002826P115RHBA_HUMANPolymorphism267607269DP114R
118UniProtVAR_002827P115SHBA_HUMANPolymorphism281864887DP114S
119UniProtVAR_002828A116DHBA_HUMANPolymorphism281864888DA115D
120UniProtVAR_002829E117AHBA_HUMANPolymorphism281864946DE116A
121UniProtVAR_002833A121EHBA_HUMANPolymorphism36075744DA120E
122UniProtVAR_002834V122MHBA_HUMANPolymorphism35187567DV121M
123UniProtVAR_002835H123QHBA_HUMANPolymorphism41479347DH122Q
124UniProtVAR_002836L126PHBA_HUMANPolymorphism41397847DL125P
125UniProtVAR_025391L126RHBA_HUMANPolymorphism41397847DL125R
126UniProtVAR_025392D127GHBA_HUMANPolymorphism33957766DD126G
127UniProtVAR_002837D127VHBA_HUMANPolymorphism33957766DD126V
128UniProtVAR_002838D127YHBA_HUMANPolymorphism33933481DD126Y
129UniProtVAR_002839K128NHBA_HUMANPolymorphism33972894DK127N
130UniProtVAR_002840L130PHBA_HUMANPolymorphism281864889DL129P
131UniProtVAR_002842A131DHBA_HUMANPolymorphism41528545DA130D
132UniProtVAR_002841A131PHBA_HUMANPolymorphism41529844DA130P
133UniProtVAR_002843S132PHBA_HUMANPolymorphism63751417DS131P
134UniProtVAR_002844S134RHBA_HUMANPolymorphism41514946DS133R
135UniProtVAR_002845V136EHBA_HUMANPolymorphism63749809DV135E
136UniProtVAR_002846L137MHBA_HUMANPolymorphism41364652DL136M
137UniProtVAR_002847L137PHBA_HUMANPolymorphism41469945DL136P
138UniProtVAR_035242L137RHBA_HUMANPolymorphism41469945DL136R
139UniProtVAR_002848S139PHBA_HUMANPolymorphism63750801DS138P
140UniProtVAR_002849K140EHBA_HUMANPolymorphism41361546DK139E
141UniProtVAR_002850K140THBA_HUMANPolymorphism56348461DK139T
142UniProtVAR_002851Y141HHBA_HUMANPolymorphism55870409DY140H

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (140, 140)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
002UniProtVAR_002720L3RHBA_HUMANPolymorphism36030576CL2R
003UniProtVAR_002721A6DHBA_HUMANPolymorphism34090856CA5D
004UniProtVAR_002722A6PHBA_HUMANPolymorphism34751764CA5P
005UniProtVAR_002723D7AHBA_HUMANPolymorphism33986902CD6A
006UniProtVAR_002724D7GHBA_HUMANPolymorphism281864805CD6G
007UniProtVAR_002725D7NHBA_HUMANPolymorphism33961916CD6N
008UniProtVAR_002726D7VHBA_HUMANPolymorphism281864805CD6V
009UniProtVAR_002727D7YHBA_HUMANPolymorphism281864806CD6Y
010UniProtVAR_002728K8EHBA_HUMANPolymorphism34817956CK7E
011UniProtVAR_038149N10THBA_HUMANPolymorphism281860608CN9T
012UniProtVAR_014605V11FHBA_HUMANPolymorphism1799896CV10F
013UniProtVAR_002729K12EHBA_HUMANPolymorphism33938574CK11E
014UniProtVAR_002730A13DHBA_HUMANPolymorphism35615982CA12D
015UniProtVAR_038150A14PHBA_HUMANPolymorphism35331909CA13P
016UniProtVAR_002731W15RHBA_HUMANPolymorphism33964317CW14R
017UniProtVAR_002732G16RHBA_HUMANPolymorphism35816645CG15R
018UniProtVAR_002733K17MHBA_HUMANPolymorphism35210126CK16M
019UniProtVAR_002734K17NHBA_HUMANPolymorphism33923844CK16N
020UniProtVAR_002735G19DHBA_HUMANPolymorphism35993097CG18D
021UniProtVAR_002736G19RHBA_HUMANPolymorphism34504387CG18R
022UniProtVAR_002737A20DHBA_HUMANUnclassified  ---CA19D
023UniProtVAR_002738A20EHBA_HUMANPolymorphism35628685CA19E
024UniProtVAR_002739H21QHBA_HUMANPolymorphism41525149CH20Q
025UniProtVAR_002740H21RHBA_HUMANPolymorphism33943087CH20R
026UniProtVAR_002741A22DHBA_HUMANPolymorphism11548605CA21D
027UniProtVAR_002742A22PHBA_HUMANPolymorphism34324664CA21P
028UniProtVAR_002743G23DHBA_HUMANPolymorphism34608326CG22D
029UniProtVAR_002744E24GHBA_HUMANPolymorphism33939421CE23G
030UniProtVAR_002745E24KHBA_HUMANPolymorphism281864819CE23K
031UniProtVAR_002746Y25HHBA_HUMANPolymorphism281864821CY24H
032UniProtVAR_002747A27EHBA_HUMANPolymorphism281864822CA26E
033UniProtVAR_025387A27VHBA_HUMANPolymorphism281864822CA26V
034UniProtVAR_002748E28DHBA_HUMANPolymorphism281865556CE27D
035UniProtVAR_002749E28GHBA_HUMANPolymorphism281864823CE27G
036UniProtVAR_002750E28VHBA_HUMANPolymorphism281864823CE27V
037UniProtVAR_002751E31KHBA_HUMANPolymorphism111033605CE30K
038UniProtVAR_025002R32KHBA_HUMANPolymorphism281864543CR31K
039UniProtVAR_002752R32SHBA_HUMANPolymorphism111033606CR31S
040UniProtVAR_002753L35RHBA_HUMANPolymorphism281864825CL34R
041UniProtVAR_002754P38RHBA_HUMANPolymorphism281864826CP37R
042UniProtVAR_002756K41MHBA_HUMANPolymorphism281864828CK40M
043UniProtVAR_002757T42SHBA_HUMANPolymorphism281860623CT41S
044UniProtVAR_002758F44LHBA_HUMANPolymorphism41491146CF43L
045UniProtVAR_002759P45LHBA_HUMANPolymorphism41514946CP44L
046UniProtVAR_002760P45RHBA_HUMANPolymorphism281864830CP44R
047UniProtVAR_002761H46QHBA_HUMANPolymorphism281860624CH45Q
048UniProtVAR_002762H46RHBA_HUMANPolymorphism281864831CH45R
049UniProtVAR_002763D48AHBA_HUMANPolymorphism281864833CD47A
050UniProtVAR_002764D48GHBA_HUMANPolymorphism281864833CD47G
051UniProtVAR_002765D48HHBA_HUMANPolymorphism281864834CD47H
052UniProtVAR_002766D48YHBA_HUMANPolymorphism281864834CD47Y
053UniProtVAR_002767L49RHBA_HUMANPolymorphism41392146CL48R
054UniProtVAR_002768S50RHBA_HUMANPolymorphism41518249CS49R
055UniProtVAR_002769H51RHBA_HUMANPolymorphism281864835CH50R
056UniProtVAR_002770G52DHBA_HUMANPolymorphism281864836CG51D
057UniProtVAR_002771G52RHBA_HUMANPolymorphism281864837CG51R
058UniProtVAR_002772A54DHBA_HUMANPolymorphism281864838CA53D
059UniProtVAR_002773Q55RHBA_HUMANPolymorphism281864839CQ54R
060UniProtVAR_002774K57RHBA_HUMANPolymorphism281864841CK56R
061UniProtVAR_002775K57THBA_HUMANPolymorphism281864841CK56T
062UniProtVAR_002776G58RHBA_HUMANPolymorphism281864843CG57R
063UniProtVAR_025388H59QHBA_HUMANPolymorphism41378349CH58Q
064UniProtVAR_002777H59YHBA_HUMANPolymorphism281864845CH58Y
065UniProtVAR_002778G60DHBA_HUMANPolymorphism28928878CG59D
066UniProtVAR_002779G60VHBA_HUMANPolymorphism281864846CG59V
067UniProtVAR_002780K61NHBA_HUMANPolymorphism28928887CK60N
068UniProtVAR_002782K62NHBA_HUMANPolymorphism33985574CK61N
069UniProtVAR_002783K62THBA_HUMANPolymorphism281865558CK61T
070UniProtVAR_002784V63MHBA_HUMANPolymorphism41515649CV62M
071UniProtVAR_002785A64DHBA_HUMANPolymorphism281864848CA63D
072UniProtVAR_002786D65YHBA_HUMANPolymorphism281864849CD64Y
073UniProtVAR_002787N69KHBA_HUMANPolymorphism1060339CN68K
074UniProtVAR_002788A72EHBA_HUMANPolymorphism281864853CA71E
075UniProtVAR_002789A72VHBA_HUMANPolymorphism281864853CA71V
076UniProtVAR_002790H73RHBA_HUMANPolymorphism281864854CH72R
077UniProtVAR_002791D75AHBA_HUMANPolymorphism281864856CD74A
078UniProtVAR_002792D75GHBA_HUMANPolymorphism33921047CD74G
079UniProtVAR_002793D75NHBA_HUMANPolymorphism281864857CD74N
080UniProtVAR_002794D76AHBA_HUMANPolymorphism33991223CD75A
081UniProtVAR_002795D76HHBA_HUMANPolymorphism281864858CD75H
082UniProtVAR_002796M77KHBA_HUMANPolymorphism281864860CM76K
083UniProtVAR_002797M77THBA_HUMANPolymorphism281864860CM76T
084UniProtVAR_002798P78RHBA_HUMANPolymorphism281864861CP77R
085UniProtVAR_002799N79HHBA_HUMANPolymorphism111033602CN78H
086UniProtVAR_002800N79KHBA_HUMANPolymorphism281860607CN78K
087UniProtVAR_012662A80GHBA_HUMANPolymorphism281860603CA79G
088UniProtVAR_002801L81RHBA_HUMANPolymorphism281864863CL80R
089UniProtVAR_002802S82CHBA_HUMANPolymorphism281864864CS81C
090UniProtVAR_002803A83DHBA_HUMANPolymorphism281864865CA82D
091UniProtVAR_002804S85RHBA_HUMANPolymorphism281860612CS84R
092UniProtVAR_002805D86VHBA_HUMANPolymorphism41331747CD85V
093UniProtVAR_002806D86YHBA_HUMANPolymorphism281864777CD85Y
094UniProtVAR_002807L87RHBA_HUMANPolymorphism281864866CL86R
095UniProtVAR_002808H88NHBA_HUMANPolymorphism281864868CH87N
096UniProtVAR_002809H88RHBA_HUMANPolymorphism281864867CH87R
097UniProtVAR_002810A89SHBA_HUMANPolymorphism281864869CA88S
098UniProtVAR_002811K91MHBA_HUMANPolymorphism281864873CK90M
099UniProtVAR_049272L92FHBA_HUMANPolymorphism17407508CL91F
100UniProtVAR_002812L92PHBA_HUMANPolymorphism17407508CL91P
101UniProtVAR_002813R93QHBA_HUMANPolymorphism281864875CR92Q
102UniProtVAR_020775R93WHBA_HUMANPolymorphism281864876CR92W
103UniProtVAR_025389D95AHBA_HUMANPolymorphism281864879CD94A
104UniProtVAR_002814D95YHBA_HUMANPolymorphism281864878CD94Y
105UniProtVAR_002815P96AHBA_HUMANPolymorphism281864881CP95A
106UniProtVAR_002816P96THBA_HUMANPolymorphism281864881CP95T
107UniProtVAR_002817N98KHBA_HUMANPolymorphism41338947CN97K
108UniProtVAR_002818K100EHBA_HUMANPolymorphism281864882CK99E
109UniProtVAR_002819S103RHBA_HUMANPolymorphism41344646CS102R
110UniProtVAR_002820H104RHBA_HUMANPolymorphism63750752CH103R
111UniProtVAR_025390H104YHBA_HUMANPolymorphism63750073CH103Y
112UniProtVAR_002821L110RHBA_HUMANPolymorphism41479844CL109R
113UniProtVAR_002822A111DHBA_HUMANPolymorphism28928889CA110D
114UniProtVAR_002823H113DHBA_HUMANPolymorphism281864885CH112D
115UniProtVAR_002824L114HHBA_HUMANPolymorphism281860618CL113H
116UniProtVAR_002825P115LHBA_HUMANPolymorphism267607269CP114L
117UniProtVAR_002826P115RHBA_HUMANPolymorphism267607269CP114R
118UniProtVAR_002827P115SHBA_HUMANPolymorphism281864887CP114S
119UniProtVAR_002828A116DHBA_HUMANPolymorphism281864888CA115D
120UniProtVAR_002829E117AHBA_HUMANPolymorphism281864946CE116A
121UniProtVAR_002833A121EHBA_HUMANPolymorphism36075744CA120E
122UniProtVAR_002834V122MHBA_HUMANPolymorphism35187567CV121M
123UniProtVAR_002835H123QHBA_HUMANPolymorphism41479347CH122Q
124UniProtVAR_002836L126PHBA_HUMANPolymorphism41397847CL125P
125UniProtVAR_025391L126RHBA_HUMANPolymorphism41397847CL125R
126UniProtVAR_025392D127GHBA_HUMANPolymorphism33957766CD126G
127UniProtVAR_002837D127VHBA_HUMANPolymorphism33957766CD126V
128UniProtVAR_002838D127YHBA_HUMANPolymorphism33933481CD126Y
129UniProtVAR_002839K128NHBA_HUMANPolymorphism33972894CK127N
130UniProtVAR_002840L130PHBA_HUMANPolymorphism281864889CL129P
131UniProtVAR_002842A131DHBA_HUMANPolymorphism41528545CA130D
132UniProtVAR_002841A131PHBA_HUMANPolymorphism41529844CA130P
133UniProtVAR_002843S132PHBA_HUMANPolymorphism63751417CS131P
134UniProtVAR_002844S134RHBA_HUMANPolymorphism41514946CS133R
135UniProtVAR_002845V136EHBA_HUMANPolymorphism63749809CV135E
136UniProtVAR_002846L137MHBA_HUMANPolymorphism41364652CL136M
137UniProtVAR_002847L137PHBA_HUMANPolymorphism41469945CL136P
138UniProtVAR_035242L137RHBA_HUMANPolymorphism41469945CL136R
139UniProtVAR_002848S139PHBA_HUMANPolymorphism63750801CS138P
140UniProtVAR_002849K140EHBA_HUMANPolymorphism41361546CK139E
141UniProtVAR_002850K140THBA_HUMANPolymorphism56348461CK139T

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (2, 4)

Asymmetric Unit (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLOBINPS01033 Globin family profile.HBA_HUMAN3-142
 
  2C:2-139
D:2-140
2NEATPS50978 NEAT domain profile.ISDH_STAAS105-232
 
345-471
543-660
  2A:105-229
B:105-227
-
-
Biological Unit 1 (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLOBINPS01033 Globin family profile.HBA_HUMAN3-142
 
  1-
D:2-140
2NEATPS50978 NEAT domain profile.ISDH_STAAS105-232
 
345-471
543-660
  1A:105-229
-
-
-
Biological Unit 2 (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLOBINPS01033 Globin family profile.HBA_HUMAN3-142
 
  1C:2-139
-
2NEATPS50978 NEAT domain profile.ISDH_STAAS105-232
 
345-471
543-660
  1-
B:105-227
-
-

(-) Exons   (3, 6)

Asymmetric Unit (3, 6)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.3aENST000003208683aENSE00001723291chr16:226679-226810132HBA_HUMAN1-32322C:2-31
D:1-31
30
31
1.3eENST000003208683eENSE00001710570chr16:226928-227132205HBA_HUMAN32-100692C:31-99
D:31-99
69
69
1.4bENST000003208684bENSE00001261694chr16:227282-227521240HBA_HUMAN101-142422C:100-139
D:100-140
40
41

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:143
 aligned with ISDH_STAAS | Q6G8J7 from UniProtKB/Swiss-Prot  Length:895

    Alignment length:143
                                    96       106       116       126       136       146       156       166       176       186       196       206       216       226   
           ISDH_STAAS    87 DESLKDAIKDPALENKEHDIGPREQVNFQLLDKNNETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFEVYENNQKLPVRLVSYSPVPEDHAYIRFPVSDGTQELKIVSSTQIDDGEETNYDYTKLVFAKPIYNDPSL 229
               SCOP domains d3s48a_ A: automated matches                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh........eeee.eeee......hhhhhhhh...eeee.....eeeeeeee....eeeeeee........eeeeee.....eeeeeeee.....eeeeeeee.......eeeeeeeeee.......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------NEAT  PDB: A:105-229 UniProt: 105-232                                                                                         PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3s48 A  87 DESLKDAIKDPALENKEHDIGPREQVNFQLLDKNNETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFEVYENNQKLPVRLVSYSPVPEDHAYIRFPVSDGTQELKIVSSTQIDDGEETNYDYTKLVFAKPIYNDPSL 229
                                    96       106       116       126       136       146       156       166       176       186       196       206       216       226   

Chain B from PDB  Type:PROTEIN  Length:141
 aligned with ISDH_STAAS | Q6G8J7 from UniProtKB/Swiss-Prot  Length:895

    Alignment length:141
                                    96       106       116       126       136       146       156       166       176       186       196       206       216       226 
           ISDH_STAAS    87 DESLKDAIKDPALENKEHDIGPREQVNFQLLDKNNETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFEVYENNQKLPVRLVSYSPVPEDHAYIRFPVSDGTQELKIVSSTQIDDGEETNYDYTKLVFAKPIYNDP 227
               SCOP domains d3s48b_ B: automated matches                                                                                                                  SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhh..............eeee.eeee......hhhhhhhh...eeee......ee.eeee....eeeeeee........eeeeee.....eeeee.........eeeeeee.......eee...eeee........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------NEAT  PDB: B:105-227 UniProt: 105-232                                                                                       PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3s48 B  87 DESLKDAIKDPALENKEHDIGPREQVNFQLLDKNNETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFEVYENNQKLPVRLVSYSPVPEDHAYIRFPVSDGTQELKIVSSTQIDDGEETNYDYTKLVFAKPIYNDP 227
                                    96       106       116       126       136       146       156       166       176       186       196       206       216       226 

Chain C from PDB  Type:PROTEIN  Length:138
 aligned with HBA_HUMAN | P69905 from UniProtKB/Swiss-Prot  Length:142

    Alignment length:138
                                    12        22        32        42        52        62        72        82        92       102       112       122       132        
            HBA_HUMAN     3 LSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSK 140
               SCOP domains d3s48c_ C: Hemoglobin, alpha-chain                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
             SAPs(SNPs) (1) R--DAE-TFEDPRRM-DDQDDGH-ED--KK--R--R--MS-LLQ-ARRRD-DR-RRQDNNMDY---K--ER-AAKRHGRCD-RVRNS-MFQ-AA-K-E--RR-----RD-DHLDA---EMQ--PGN-PDP-R-EM-PE SAPs(SNPs) (1)
             SAPs(SNPs) (2) ---PG---------N-RERP-K--VG---S------------RR-G---R----T-YV-T---------V--GHT-K------Y-R---PW-YT-------Y----------R----------RV---P-----P--T SAPs(SNPs) (2)
             SAPs(SNPs) (3) ----N--------------------V-------------------H--------------------------N---------------------------------------S-----------Y---------R--- SAPs(SNPs) (3)
             SAPs(SNPs) (4) ----V----------------------------------------Y-------------------------------------------------------------------------------------------- SAPs(SNPs) (4)
             SAPs(SNPs) (5) ----Y------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (5)
                    PROSITE GLOBIN  PDB: C:2-139 UniProt: 3-142                                                                                                        PROSITE
           Transcript 1 (1) Exon 1.3a  PDB: C:2-31        --------------------------------------------------------------------Exon 1.4b  PDB: C:100-139 [INCOMPLETE]   Transcript 1 (1)
           Transcript 1 (2) -----------------------------Exon 1.3e  PDB: C:31-99 UniProt: 32-100                              ---------------------------------------- Transcript 1 (2)
                 3s48 C   2 LSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSK 139
                                    11        21        31        41        51        61        71        81        91       101       111       121       131        

Chain D from PDB  Type:PROTEIN  Length:140
 aligned with HBA_HUMAN | P69905 from UniProtKB/Swiss-Prot  Length:142

    Alignment length:140
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141
            HBA_HUMAN     2 VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 141
               SCOP domains d3s48d_ D: Hemoglobin, alpha-chain                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
             SAPs(SNPs) (1) ER--DAE-TFEDPRRM-DDQDDGH-ED--KK--R--R--MS-LLQ-ARRRD-DR-RRQDNNMDY---K--ER-AAKRHGRCD-RVRNS-MFQ-AA-K-E--RR-----RD-DHLDA---EMQ--PGN-PDP-R-EM-PEH SAPs(SNPs) (1)
             SAPs(SNPs) (2) ----PG---------N-RERP-K--VG---S------------RR-G---R----T-YV-T---------V--GHT-K------Y-R---PW-YT-------Y----------R----------RV---P-----P--T- SAPs(SNPs) (2)
             SAPs(SNPs) (3) -----N--------------------V-------------------H--------------------------N---------------------------------------S-----------Y---------R---- SAPs(SNPs) (3)
             SAPs(SNPs) (4) -----V----------------------------------------Y--------------------------------------------------------------------------------------------- SAPs(SNPs) (4)
             SAPs(SNPs) (5) -----Y-------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (5)
                    PROSITE -GLOBIN  PDB: D:2-140 UniProt: 3-142                                                                                                         PROSITE
           Transcript 1 (1) Exon 1.3a  PDB: D:1-31         --------------------------------------------------------------------Exon 1.4b  PDB: D:100-140 [INCOMPLETE]    Transcript 1 (1)
           Transcript 1 (2) ------------------------------Exon 1.3e  PDB: D:31-99 UniProt: 32-100                              ----------------------------------------- Transcript 1 (2)
                 3s48 D   1 VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 140
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 4)

Asymmetric Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3S48)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3S48)

(-) Gene Ontology  (27, 29)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (ISDH_STAAS | Q6G8J7)
cellular component
    GO:0005618    cell wall    The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

Chain C,D   (HBA_HUMAN | P69905)
molecular function
    GO:0031720    haptoglobin binding    Interacting selectively and non-covalently with a haptoglobin, any alpha2 globulin of blood plasma that can combine with free oxyhemoglobin to form a stable complex.
    GO:0020037    heme binding    Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
    GO:0005506    iron ion binding    Interacting selectively and non-covalently with iron (Fe) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0019825    oxygen binding    Interacting selectively and non-covalently with oxygen (O2).
    GO:0005344    oxygen transporter activity    Enables the directed movement of oxygen into, out of or within a cell, or between cells.
    GO:0004601    peroxidase activity    Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0015701    bicarbonate transport    The directed movement of bicarbonate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0098869    cellular oxidant detoxification    Any process carried out at the cellular level that reduces or removes the toxicity superoxide radicals or hydrogen peroxide.
    GO:0042744    hydrogen peroxide catabolic process    The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2).
    GO:0015671    oxygen transport    The directed movement of oxygen (O2) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0010942    positive regulation of cell death    Any process that increases the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.
    GO:0051291    protein heterooligomerization    The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers that are not all identical. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
    GO:0006898    receptor-mediated endocytosis    An endocytosis process in which cell surface receptors ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles.
    GO:0042542    response to hydrogen peroxide    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus.
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0072562    blood microparticle    A phospholipid microvesicle that is derived from any of several cell types, such as platelets, blood cells, endothelial cells, or others, and contains membrane receptors as well as other proteins characteristic of the parental cell. Microparticles are heterogeneous in size, and are characterized as microvesicles free of nucleic acids.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0022627    cytosolic small ribosomal subunit    The small subunit of a ribosome located in the cytosol.
    GO:0071682    endocytic vesicle lumen    The volume enclosed by the membrane of an endocytic vesicle.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0031838    haptoglobin-hemoglobin complex    A protein complex formed by the stable binding of a haptoglobin to hemoglobin.
    GO:0005833    hemoglobin complex    An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HBA_HUMAN | P699051a00 1a01 1a0u 1a0z 1a3n 1a3o 1a9w 1abw 1aby 1aj9 1b86 1bab 1bbb 1bij 1buw 1bz0 1bz1 1bzz 1c7b 1c7c 1c7d 1cls 1cmy 1coh 1dke 1dxt 1dxu 1dxv 1fdh 1fn3 1g9v 1gbu 1gbv 1gli 1gzx 1hab 1hac 1hba 1hbb 1hbs 1hco 1hdb 1hga 1hgb 1hgc 1hho 1ird 1j3y 1j3z 1j40 1j41 1j7s 1j7w 1j7y 1jy7 1k0y 1k1k 1kd2 1lfl 1lfq 1lft 1lfv 1lfy 1lfz 1ljw 1m9p 1mko 1nej 1nih 1nqp 1o1i 1o1j 1o1k 1o1l 1o1m 1o1n 1o1o 1o1p 1qi8 1qsh 1qsi 1qxd 1qxe 1r1x 1r1y 1rps 1rq3 1rq4 1rqa 1rvw 1sdk 1sdl 1shr 1si4 1thb 1uiw 1vwt 1xxt 1xy0 1xye 1xz2 1xz4 1xz5 1xz7 1xzu 1xzv 1y01 1y09 1y0a 1y0c 1y0d 1y0t 1y0w 1y22 1y2z 1y31 1y35 1y45 1y46 1y4b 1y4f 1y4g 1y4p 1y4q 1y4r 1y4v 1y5f 1y5j 1y5k 1y7c 1y7d 1y7g 1y7z 1y83 1y85 1y8w 1ydz 1ye0 1ye1 1ye2 1yen 1yeo 1yeq 1yeu 1yev 1yff 1yg5 1ygd 1ygf 1yh9 1yhe 1yhr 1yie 1yih 1yvq 1yvt 1yzi 1z8u 2d5z 2d60 2dn1 2dn2 2dn3 2dxm 2h35 2hbc 2hbd 2hbe 2hbf 2hbs 2hco 2hhb 2hhd 2hhe 2m6z 2w6v 2w72 2yrs 3b75 3d17 3d7o 3dut 3hhb 3hxn 3ia3 3ic0 3ic2 3kmf 3nl7 3nmm 3odq 3onz 3oo4 3oo5 3ovu 3p5q 3qjb 3qjc 3qjd 3qje 3r5i 3s65 3s66 3szk 3wcp 3whm 4fc3 4hhb 4ij2 4l7y 4m4a 4m4b 4mqc 4mqg 4mqh 4mqi 4mqj 4mqk 4n7n 4n7o 4n7p 4n8t 4ni0 4ni1 4rol 4rom 4wjg 4x0l 4xs0 5e29 5e6e 5e83 5ee4 5hu6 5hy8 5jdo 5kdq 5me2 5ni1 5sw7 5u3i 5ucu 5ufj 5urc 6hbw
        ISDH_STAAS | Q6G8J72h3k 3ovu

(-) Related Entries Specified in the PDB File

3ovu CRYSTAL STRUCTURE OF HUMAN ALPHA-HAEMOGLOBIN COMPLEXED WITH AHSP AND THE FIRST NEAT DOMAIN OF ISDH FROM STAPHYLOCOCCUS AUREUS