3RYW - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF P. VIVAX GERANYLGERANYL DIPHOSPHATE SYNTHASE COMPLEXED WITH BPH-811

Authors :   J. H. No, Y. -L. Liu, Y. Zhang, E. Oldfield

Date :   11 May 11 (Deposition) - 23 May 12 (Release) - 23 May 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.90

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,D  (1x)
Biol. Unit 2: B,C  (1x)
Biol. Unit 3: A (1x),B (1x),C (1x),D (1x)

Keywords :   Transferase, Geranylgeranyl Diphosphate Synthase, Bph-811 (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. H. No, F. De Macedo Dossin, Y. Zhang, Y. L. Liu, W. Zhu, X. Feng, J. A. Yoo, E. Lee, K. Wang, R. Hui, L. H. Freitas-Junior, E. Oldfield
Lipophilic Analogs Of Zoledronate And Risedronate Inhibit Plasmodium Geranylgeranyl Diphosphate Synthase (Ggpps) And Exhibit Potent Antimalarial Activity.
Proc. Natl. Acad. Sci. Usa V. 109 4058 2012
PubMed-ID: 22392982 | Reference-DOI: 10.1073/PNAS.1118215109

Molecule 1 - FARNESYL PYROPHOSPHATE SYNTHASE
	Chains	:	A, B, C, D
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Gene	:	GGPPS, PVX_092040
	Organism Scientific	:	PLASMODIUM VIVAX
	Organism Taxid	:	126793
	Strain	:	SALVADOR I

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A			D
Biological Unit 2 (1x)	:		B	C
Biological Unit 3 (1x)	:	A (1x)	B (1x)	C (1x)	D (1x)

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 20)

No.	Name	Count	Type	Full Name
1	K9H	4	Ligand/Ion	{2-[5-(DECYLOXY)PYRIDIN-3-YL]ETHANE-1,1-DIYL}BIS(PHOSPHONIC ACID)
2	MG	12	Ligand/Ion	MAGNESIUM ION
3	SO4	4	Ligand/Ion	SULFATE ION

Biological Unit 1 (2, 4)

No.	Name	Count	Type	Full Name
1	K9H	2	Ligand/Ion	{2-[5-(DECYLOXY)PYRIDIN-3-YL]ETHANE-1,1-DIYL}BIS(PHOSPHONIC ACID)
2	MG	-1	Ligand/Ion	MAGNESIUM ION
3	SO4	2	Ligand/Ion	SULFATE ION

Biological Unit 2 (2, 4)

No.	Name	Count	Type	Full Name
1	K9H	2	Ligand/Ion	{2-[5-(DECYLOXY)PYRIDIN-3-YL]ETHANE-1,1-DIYL}BIS(PHOSPHONIC ACID)
2	MG	-1	Ligand/Ion	MAGNESIUM ION
3	SO4	2	Ligand/Ion	SULFATE ION

Biological Unit 3 (2, 4)

No.	Name	Count	Type	Full Name
1	K9H	2	Ligand/Ion	{2-[5-(DECYLOXY)PYRIDIN-3-YL]ETHANE-1,1-DIYL}BIS(PHOSPHONIC ACID)
2	MG	-1	Ligand/Ion	MAGNESIUM ION
3	SO4	2	Ligand/Ion	SULFATE ION

Asymmetric Unit (20, 20)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	PHE A:122 , ALA A:125 , ASP A:126 , ASP A:130 , ARG A:135 , VAL A:156 , LEU A:157 , GLN A:195 , LYS A:243 , THR A:244 , ASP A:287 , LYS A:301 , MG A:2002 , MG A:2003 , MG A:2004 , VAL D:153 , LEU D:157 , K9H D:2001	BINDING SITE FOR RESIDUE K9H A 2001
02	AC2	SOFTWARE	ASP A:287 , ASP A:305 , K9H A:2001	BINDING SITE FOR RESIDUE MG A 2002
03	AC3	SOFTWARE	ASP A:126 , ASP A:130 , K9H A:2001 , MG A:2004 , HOH A:2108	BINDING SITE FOR RESIDUE MG A 2003
04	AC4	SOFTWARE	ASP A:126 , ASP A:130 , GLN A:195 , ASP A:198 , K9H A:2001 , MG A:2003	BINDING SITE FOR RESIDUE MG A 2004
05	AC5	SOFTWARE	GLY A:80 , LYS A:81 , ARG A:84 , GLN A:119 , ARG A:136	BINDING SITE FOR RESIDUE SO4 A 2005
06	AC6	SOFTWARE	ASP B:126 , ASP B:130 , ARG B:135 , VAL B:156 , THR B:191 , GLN B:195 , LYS B:243 , THR B:244 , GLN B:284 , ASP B:287 , LYS B:301 , MG B:2002 , MG B:2003 , MG B:2004 , HOH B:2104 , HOH B:2115 , VAL C:153 , LEU C:157 , K9H C:2001	BINDING SITE FOR RESIDUE K9H B 2001
07	AC7	SOFTWARE	ASP B:287 , ASP B:305 , K9H B:2001	BINDING SITE FOR RESIDUE MG B 2002
08	AC8	SOFTWARE	ASP B:126 , ASP B:130 , K9H B:2001 , MG B:2004	BINDING SITE FOR RESIDUE MG B 2003
09	AC9	SOFTWARE	ASP B:126 , ASP B:130 , GLN B:195 , ASP B:198 , K9H B:2001 , MG B:2003	BINDING SITE FOR RESIDUE MG B 2004
10	BC1	SOFTWARE	LYS B:81 , GLN B:119 , ARG B:136	BINDING SITE FOR RESIDUE SO4 B 2005
11	BC2	SOFTWARE	VAL B:153 , ASN B:154 , LEU B:157 , K9H B:2001 , PHE C:122 , ALA C:125 , ASP C:126 , ASP C:130 , ARG C:135 , VAL C:156 , THR C:191 , GLN C:195 , LYS C:243 , THR C:244 , ASP C:287 , LYS C:301 , MG C:2002 , MG C:2003 , MG C:2004	BINDING SITE FOR RESIDUE K9H C 2001
12	BC3	SOFTWARE	ASP C:287 , ASP C:305 , K9H C:2001	BINDING SITE FOR RESIDUE MG C 2002
13	BC4	SOFTWARE	ASP C:126 , ASP C:130 , K9H C:2001	BINDING SITE FOR RESIDUE MG C 2003
14	BC5	SOFTWARE	ASP C:126 , ASP C:130 , GLN C:195 , ASP C:198 , K9H C:2001	BINDING SITE FOR RESIDUE MG C 2004
15	BC6	SOFTWARE	LYS C:81 , GLN C:119 , ARG C:136	BINDING SITE FOR RESIDUE SO4 C 2005
16	BC7	SOFTWARE	VAL A:153 , LEU A:157 , K9H A:2001 , PHE D:122 , ALA D:125 , ASP D:126 , ASP D:130 , ARG D:135 , VAL D:156 , THR D:191 , GLN D:195 , LYS D:243 , THR D:244 , ASP D:287 , LYS D:301 , MG D:2002 , MG D:2003 , MG D:2004 , HOH D:2118	BINDING SITE FOR RESIDUE K9H D 2001
17	BC8	SOFTWARE	ASP D:287 , K9H D:2001	BINDING SITE FOR RESIDUE MG D 2002
18	BC9	SOFTWARE	ASP D:126 , ASP D:130 , K9H D:2001	BINDING SITE FOR RESIDUE MG D 2003
19	CC1	SOFTWARE	ASP D:126 , ASP D:130 , GLN D:195 , ASP D:198 , K9H D:2001	BINDING SITE FOR RESIDUE MG D 2004
20	CC2	SOFTWARE	LYS D:81 , ARG D:84 , GLN D:119 , ARG D:136	BINDING SITE FOR RESIDUE SO4 D 2005

(no "SS Bond" information available for 3RYW)

(no "Cis Peptide Bond" information available for 3RYW)

(no "SAP(SNP)/Variant" information available for 3RYW)

(no "PROSITE Motif" information available for 3RYW)

(no "Exon" information available for 3RYW)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:358
 aligned with A5K4U6_PLAVS | A5K4U6 from UniProtKB/TrEMBL  Length:375

    Alignment length:363
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372   
         A5K4U6_PLAVS    13 LAFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYEYVKNRDINSSEWEKAACLAWCIEILQAAFLVADDIMDKGETRRNKYCWYLLKDVETKNAVNDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSDAHREIDVNNINVPEQPVININMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNLIYKKIEDISMLMGEYFQIHDDYLDIFGDSTKTGKVGSDIQNNKLTWPLIKTFELCSEPDKIKIVKNYGKNNLACVKVIDSLYEQYKIRKHYESYEKAQKAKILSAINELHHEGIEYVLKYLLEILFTGV 375
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh..-.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee..ee.hhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh----...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ryw A  34 LAFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYEYVKNR-INSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAVNDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS----EIDVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNLIYKKIEDISMLMGEYFQIHDDYLDIFGDSTKTGKVGSDIQNNKLTWPLIKTFELCSEPDKIKIVKNYGKNNLACVKVIDSLYEQYKIRKHYESYEKAQKAKILSAINELHHEGIEYVLKYLLEILFTGV 396
                                    43        53        63        73        83        93    | |103       113       123       133       143       153       163       173       183       193       203   |   213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393   
                                                                                           98 |                                                                                                        207  212                                                                                                                                                                                        
                                                                                            100

Chain B from PDB  Type:PROTEIN  Length:356
 aligned with A5K4U6_PLAVS | A5K4U6 from UniProtKB/TrEMBL  Length:375

    Alignment length:360
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372
         A5K4U6_PLAVS    13 LAFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYEYVKNRDINSSEWEKAACLAWCIEILQAAFLVADDIMDKGETRRNKYCWYLLKDVETKNAVNDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSDAHREIDVNNINVPEQPVININMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNLIYKKIEDISMLMGEYFQIHDDYLDIFGDSTKTGKVGSDIQNNKLTWPLIKTFELCSEPDKIKIVKNYGKNNLACVKVIDSLYEQYKIRKHYESYEKAQKAKILSAINELHHEGIEYVLKYLLEILF 372
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh..-.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee..ee.hhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.---...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3ryw B  34 LAFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYEYVKNR-INSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAVNDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSD---EIDVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNLIYKKIEDISMLMGEYFQIHDDYLDIFGDSTKTGKVGSDIQNNKLTWPLIKTFELCSEPDKIKIVKNYGKNNLACVKVIDSLYEQYKIRKHYESYEKAQKAKILSAINELHHEGIEYVLKYLLEILF 393
                                    43        53        63        73        83        93    | |103       113       123       133       143       153       163       173       183       193       203    |  213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393
                                                                                           98 |                                                                                                         208 212                                                                                                                                                                                     
                                                                                            100

Chain C from PDB  Type:PROTEIN  Length:355
 aligned with A5K4U6_PLAVS | A5K4U6 from UniProtKB/TrEMBL  Length:375

    Alignment length:361
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372 
         A5K4U6_PLAVS    13 LAFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYEYVKNRDINSSEWEKAACLAWCIEILQAAFLVADDIMDKGETRRNKYCWYLLKDVETKNAVNDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSDAHREIDVNNINVPEQPVININMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNLIYKKIEDISMLMGEYFQIHDDYLDIFGDSTKTGKVGSDIQNNKLTWPLIKTFELCSEPDKIKIVKNYGKNNLACVKVIDSLYEQYKIRKHYESYEKAQKAKILSAINELHHEGIEYVLKYLLEILFT 373
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh..-.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee..ee.hhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh----........-......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ryw C  34 LAFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYEYVKNR-INSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAVNDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS----EIDVNNIN-PEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNLIYKKIEDISMLMGEYFQIHDDYLDIFGDSTKTGKVGSDIQNNKLTWPLIKTFELCSEPDKIKIVKNYGKNNLACVKVIDSLYEQYKIRKHYESYEKAQKAKILSAINELHHEGIEYVLKYLLEILFT 394
                                    43        53        63        73        83        93    | |103       113       123       133       143       153       163       173       183       193       203   |   213     | 223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393 
                                                                                           98 |                                                                                                        207  212    219 |                                                                                                                                                                             
                                                                                            100                                                                                                                      221

Chain D from PDB  Type:PROTEIN  Length:358
 aligned with A5K4U6_PLAVS | A5K4U6 from UniProtKB/TrEMBL  Length:375

    Alignment length:363
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372   
         A5K4U6_PLAVS    13 LAFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYEYVKNRDINSSEWEKAACLAWCIEILQAAFLVADDIMDKGETRRNKYCWYLLKDVETKNAVNDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSDAHREIDVNNINVPEQPVININMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNLIYKKIEDISMLMGEYFQIHDDYLDIFGDSTKTGKVGSDIQNNKLTWPLIKTFELCSEPDKIKIVKNYGKNNLACVKVIDSLYEQYKIRKHYESYEKAQKAKILSAINELHHEGIEYVLKYLLEILFTGV 375
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh..-.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee..ee.hhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh----...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ryw D  34 LAFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYEYVKNR-INSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAVNDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS----EIDVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNLIYKKIEDISMLMGEYFQIHDDYLDIFGDSTKTGKVGSDIQNNKLTWPLIKTFELCSEPDKIKIVKNYGKNNLACVKVIDSLYEQYKIRKHYESYEKAQKAKILSAINELHHEGIEYVLKYLLEILFTGV 396
                                    43        53        63        73        83        93    | |103       113       123       133       143       153       163       173       183       193       203   |   213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393   
                                                                                           98 |                                                                                                        207  212                                                                                                                                                                                        
                                                                                            100

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 3RYW)

(no "CATH Domain" information available for 3RYW)

(no "Pfam Domain" information available for 3RYW)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (A5K4U6_PLAVS | A5K4U6)

molecular function
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0008299	isoprenoid biosynthetic process	The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.
cellular component
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

Asymmetric Unit
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	Ligands, Modified Residues, Ions
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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 3ryw)

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	A5K4U6_PLAVS \| A5K4U6
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/TrEMBL
	A5K4U6_PLAVS \| A5K4U6	:	3cc9 3ez3 3ldw 3mav 3ph7 3rbm 5hn7 5hn8 5hn9 5hna

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 20)

Sites (20, 20)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (5, 5)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File