Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
(-)Biological Unit 3
(-)Biological Unit 4
(-)Biological Unit 5
(-)Biological Unit 6
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)
Image Biological Unit 3
Biological Unit 3  (Jmol Viewer)
Image Biological Unit 4
Biological Unit 4  (Jmol Viewer)
Image Biological Unit 5
Biological Unit 5  (Jmol Viewer)
Image Biological Unit 6
Biological Unit 6  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF A HUMAN CYTOCHROME P450 2B6 (Y226H/K262R) IN COMPLEX WITH THE INHIBITOR 4-(4-NITROBENZYL)PYRIDINE.
 
Authors :  M. B. Shah, J. Pascual, C. D. Stout, J. R. Halpert
Date :  23 Feb 11  (Deposition) - 21 Sep 11  (Release) - 05 Dec 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Keywords :  P450, Cytochrome P450 2B6, Monooxygenase, Membrane Protein, Cyp2B6, Endoplasmic Reticulum, Heme, Iron, Membrane, Metal Binding, Microsome, Phosphoprotein, Oxidoreductase-Oxidoreductase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. B. Shah, J. Pascual, Q. Zhang, C. D. Stout, J. R. Halpert
Structures Of Cytochrome P450 2B6 Bound To 4-Benzylpyridine And 4-(4-Nitrobenzyl)Pyridine: Insight Into Inhibitor Binding And Rearrangement Of Active Site Side Chains.
Mol. Pharmacol. V. 80 1047 2011
PubMed-ID: 21875942  |  Reference-DOI: 10.1124/MOL.111.074427

(-) Compounds

Molecule 1 - CYTOCHROME P450 2B6
    ChainsA, B, C, D, E, F
    EC Number1.14.14.1
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPKK
    Expression System StrainJM109
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentCYTOCHROME P450 2B6, RESIDUES 3-21 DELETED
    GeneCYP2B6
    MutationYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit ABCDEF
Biological Unit 1 (1x)A     
Biological Unit 2 (1x) B    
Biological Unit 3 (1x)  C   
Biological Unit 4 (1x)   D  
Biological Unit 5 (1x)    E 
Biological Unit 6 (1x)     F

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 19)

Asymmetric Unit (3, 19)
No.NameCountTypeFull Name
13QU5Ligand/Ion4-(4-NITROBENZYL)PYRIDINE
2CM58Ligand/Ion5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE
3HEM6Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
Biological Unit 1 (3, 3)
No.NameCountTypeFull Name
13QU1Ligand/Ion4-(4-NITROBENZYL)PYRIDINE
2CM51Ligand/Ion5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE
3HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
Biological Unit 2 (3, 4)
No.NameCountTypeFull Name
13QU1Ligand/Ion4-(4-NITROBENZYL)PYRIDINE
2CM52Ligand/Ion5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE
3HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
Biological Unit 3 (3, 3)
No.NameCountTypeFull Name
13QU1Ligand/Ion4-(4-NITROBENZYL)PYRIDINE
2CM51Ligand/Ion5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE
3HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
Biological Unit 4 (3, 4)
No.NameCountTypeFull Name
13QU1Ligand/Ion4-(4-NITROBENZYL)PYRIDINE
2CM52Ligand/Ion5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE
3HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
Biological Unit 5 (3, 3)
No.NameCountTypeFull Name
13QU1Ligand/Ion4-(4-NITROBENZYL)PYRIDINE
2CM51Ligand/Ion5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE
3HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
Biological Unit 6 (2, 2)
No.NameCountTypeFull Name
13QU-1Ligand/Ion4-(4-NITROBENZYL)PYRIDINE
2CM51Ligand/Ion5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE
3HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE

(-) Sites  (19, 19)

Asymmetric Unit (19, 19)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREARG A:98 , VAL A:113 , ILE A:114 , TRP A:121 , ARG A:125 , LEU A:295 , ALA A:298 , GLY A:299 , THR A:302 , THR A:303 , GLN A:357 , LEU A:363 , VAL A:367 , HIS A:369 , PRO A:428 , PHE A:429 , SER A:430 , ARG A:434 , CYS A:436 , LEU A:437 , 3QU A:501BINDING SITE FOR RESIDUE HEM A 500
02AC2SOFTWAREALA A:298 , THR A:302 , HEM A:500BINDING SITE FOR RESIDUE 3QU A 501
03AC3SOFTWAREPHE A:223 , HIS A:226 , PHE A:227 , PRO A:228 , ARG A:232 , LEU C:39 , PRO D:38BINDING SITE FOR RESIDUE CM5 A 601
04AC4SOFTWAREARG B:98 , TRP B:121 , ARG B:125 , MET B:132 , ILE B:179 , ALA B:298 , GLY B:299 , THR B:302 , THR B:306 , GLN B:357 , HIS B:369 , LEU B:392 , PRO B:428 , PHE B:429 , SER B:430 , ARG B:434 , CYS B:436 , LEU B:437 , 3QU B:501BINDING SITE FOR RESIDUE HEM B 500
05AC5SOFTWAREVAL B:104 , PHE B:108 , PHE B:206 , PHE B:297 , ALA B:298 , THR B:302 , LEU B:363 , HEM B:500BINDING SITE FOR RESIDUE 3QU B 501
06AC6SOFTWAREARG A:35 , PRO A:38 , PHE B:223 , HIS B:226 , PHE B:227 , PRO B:228 , ARG B:232 , CM5 B:608 , CM5 C:603BINDING SITE FOR RESIDUE CM5 B 602
07AC7SOFTWARELEU B:39 , PHE B:220 , GLY B:222 , PHE B:223 , LYS B:225 , HOH B:517 , CM5 B:602 , CM5 D:607BINDING SITE FOR RESIDUE CM5 B 608
08AC8SOFTWAREARG C:98 , TRP C:121 , ARG C:125 , ILE C:179 , GLY C:299 , THR C:302 , THR C:303 , THR C:306 , HIS C:369 , LEU C:392 , PRO C:428 , PHE C:429 , SER C:430 , ARG C:434 , CYS C:436 , LEU C:437 , 3QU C:501BINDING SITE FOR RESIDUE HEM C 500
09AC9SOFTWAREPHE C:206 , ALA C:298 , THR C:302 , LEU C:363 , HEM C:500BINDING SITE FOR RESIDUE 3QU C 501
10BC1SOFTWARELEU A:37 , CM5 B:602 , HIS C:226 , PHE C:227 , PRO C:228 , ARG C:232 , ARG E:35 , PRO E:38BINDING SITE FOR RESIDUE CM5 C 603
11BC2SOFTWAREARG D:98 , VAL D:113 , ILE D:114 , TRP D:121 , ARG D:125 , ILE D:179 , LEU D:295 , ALA D:298 , GLY D:299 , THR D:302 , THR D:306 , GLN D:357 , LEU D:363 , HIS D:369 , LEU D:392 , PRO D:428 , PHE D:429 , SER D:430 , ARG D:434 , CYS D:436 , LEU D:437 , GLY D:438 , 3QU D:501BINDING SITE FOR RESIDUE HEM D 500
12BC3SOFTWAREPHE D:297 , ALA D:298 , THR D:302 , LEU D:363 , HEM D:500BINDING SITE FOR RESIDUE 3QU D 501
13BC4SOFTWAREPHE D:223 , HIS D:226 , PHE D:227 , PRO D:228 , ARG D:232 , CM5 E:605BINDING SITE FOR RESIDUE CM5 D 604
14BC5SOFTWARECM5 B:608 , LEU D:40 , PHE D:220 , GLY D:222 , HIS D:226BINDING SITE FOR RESIDUE CM5 D 607
15BC6SOFTWAREARG E:98 , VAL E:113 , ILE E:114 , TRP E:121 , ARG E:125 , ALA E:298 , GLY E:299 , THR E:302 , THR E:303 , GLN E:357 , LEU E:363 , VAL E:367 , HIS E:369 , LEU E:392 , PRO E:428 , PHE E:429 , SER E:430 , ARG E:434 , CYS E:436 , LEU E:437 , 3QU E:501BINDING SITE FOR RESIDUE HEM E 500
16BC7SOFTWAREPHE E:297 , ALA E:298 , THR E:302 , HEM E:500BINDING SITE FOR RESIDUE 3QU E 501
17BC8SOFTWARELEU B:37 , CM5 D:604 , HIS E:226 , PHE E:227 , ARG E:232 , ARG F:35BINDING SITE FOR RESIDUE CM5 E 605
18BC9SOFTWAREARG F:98 , VAL F:113 , TRP F:121 , ARG F:125 , LEU F:295 , ALA F:298 , GLY F:299 , THR F:302 , THR F:306 , LEU F:363 , HIS F:369 , LEU F:392 , PRO F:428 , PHE F:429 , SER F:430 , ARG F:434 , CYS F:436 , LEU F:437 , ALA F:442BINDING SITE FOR RESIDUE HEM F 500
19CC1SOFTWAREPRO D:38 , LEU D:39 , HIS F:226 , PHE F:227 , PRO F:228 , ARG F:232BINDING SITE FOR RESIDUE CM5 F 606

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3QU8)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3QU8)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (16, 85)

Asymmetric Unit (16, 85)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_025207D28GCP2B6_HUMANPolymorphism33980385A/B/C/D/E/FG28G
02UniProtVAR_033819R29PCP2B6_HUMANPolymorphism34284776A/B/C/D/E/FK29P
03UniProtVAR_025208R29SCP2B6_HUMANPolymorphism33926104A/B/C/D/E/FK29S
04UniProtVAR_023564M46VCP2B6_HUMANPolymorphism35303484A/B/C/D/E/FM46V
05UniProtVAR_023565G99ECP2B6_HUMANPolymorphism36060847A/B/C/D/E/FG99E
06UniProtVAR_016948K139ECP2B6_HUMANPolymorphism12721655CK139E
07UniProtVAR_023566R140QCP2B6_HUMANPolymorphism35773040CR140Q
08UniProtVAR_016924P167ACP2B6_HUMANPolymorphism3826711A/B/C/D/E/FP167A
09UniProtVAR_016925Q172HCP2B6_HUMANPolymorphism3745274A/B/C/D/E/FQ172H
10UniProtVAR_016928S259RCP2B6_HUMANPolymorphism45482602A/B/C/D/E/FS259R
11UniProtVAR_016926K262RCP2B6_HUMANPolymorphism2279343A/B/C/D/E/FR262R
12UniProtVAR_025209N289KCP2B6_HUMANPolymorphism34277950A/B/C/D/E/FN289K
13UniProtVAR_025210T306SCP2B6_HUMANPolymorphism34698757A/B/C/D/E/FT306S
14UniProtVAR_024716I328TCP2B6_HUMANPolymorphism28399499A/B/C/D/E/FI328T
15UniProtVAR_023567I391NCP2B6_HUMANPolymorphism35979566A/B/C/D/E/FI391N
16UniProtVAR_016929R487CCP2B6_HUMANPolymorphism3211371A/B/C/D/ER487C

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (14, 14)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_025207D28GCP2B6_HUMANPolymorphism33980385AG28G
02UniProtVAR_033819R29PCP2B6_HUMANPolymorphism34284776AK29P
03UniProtVAR_025208R29SCP2B6_HUMANPolymorphism33926104AK29S
04UniProtVAR_023564M46VCP2B6_HUMANPolymorphism35303484AM46V
05UniProtVAR_023565G99ECP2B6_HUMANPolymorphism36060847AG99E
08UniProtVAR_016924P167ACP2B6_HUMANPolymorphism3826711AP167A
09UniProtVAR_016925Q172HCP2B6_HUMANPolymorphism3745274AQ172H
10UniProtVAR_016928S259RCP2B6_HUMANPolymorphism45482602AS259R
11UniProtVAR_016926K262RCP2B6_HUMANPolymorphism2279343AR262R
12UniProtVAR_025209N289KCP2B6_HUMANPolymorphism34277950AN289K
13UniProtVAR_025210T306SCP2B6_HUMANPolymorphism34698757AT306S
14UniProtVAR_024716I328TCP2B6_HUMANPolymorphism28399499AI328T
15UniProtVAR_023567I391NCP2B6_HUMANPolymorphism35979566AI391N
16UniProtVAR_016929R487CCP2B6_HUMANPolymorphism3211371AR487C

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (14, 14)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_025207D28GCP2B6_HUMANPolymorphism33980385BG28G
02UniProtVAR_033819R29PCP2B6_HUMANPolymorphism34284776BK29P
03UniProtVAR_025208R29SCP2B6_HUMANPolymorphism33926104BK29S
04UniProtVAR_023564M46VCP2B6_HUMANPolymorphism35303484BM46V
05UniProtVAR_023565G99ECP2B6_HUMANPolymorphism36060847BG99E
08UniProtVAR_016924P167ACP2B6_HUMANPolymorphism3826711BP167A
09UniProtVAR_016925Q172HCP2B6_HUMANPolymorphism3745274BQ172H
10UniProtVAR_016928S259RCP2B6_HUMANPolymorphism45482602BS259R
11UniProtVAR_016926K262RCP2B6_HUMANPolymorphism2279343BR262R
12UniProtVAR_025209N289KCP2B6_HUMANPolymorphism34277950BN289K
13UniProtVAR_025210T306SCP2B6_HUMANPolymorphism34698757BT306S
14UniProtVAR_024716I328TCP2B6_HUMANPolymorphism28399499BI328T
15UniProtVAR_023567I391NCP2B6_HUMANPolymorphism35979566BI391N
16UniProtVAR_016929R487CCP2B6_HUMANPolymorphism3211371BR487C

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 3 (16, 16)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_025207D28GCP2B6_HUMANPolymorphism33980385CG28G
02UniProtVAR_033819R29PCP2B6_HUMANPolymorphism34284776CK29P
03UniProtVAR_025208R29SCP2B6_HUMANPolymorphism33926104CK29S
04UniProtVAR_023564M46VCP2B6_HUMANPolymorphism35303484CM46V
05UniProtVAR_023565G99ECP2B6_HUMANPolymorphism36060847CG99E
06UniProtVAR_016948K139ECP2B6_HUMANPolymorphism12721655CK139E
07UniProtVAR_023566R140QCP2B6_HUMANPolymorphism35773040CR140Q
08UniProtVAR_016924P167ACP2B6_HUMANPolymorphism3826711CP167A
09UniProtVAR_016925Q172HCP2B6_HUMANPolymorphism3745274CQ172H
10UniProtVAR_016928S259RCP2B6_HUMANPolymorphism45482602CS259R
11UniProtVAR_016926K262RCP2B6_HUMANPolymorphism2279343CR262R
12UniProtVAR_025209N289KCP2B6_HUMANPolymorphism34277950CN289K
13UniProtVAR_025210T306SCP2B6_HUMANPolymorphism34698757CT306S
14UniProtVAR_024716I328TCP2B6_HUMANPolymorphism28399499CI328T
15UniProtVAR_023567I391NCP2B6_HUMANPolymorphism35979566CI391N
16UniProtVAR_016929R487CCP2B6_HUMANPolymorphism3211371CR487C

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 4 (14, 14)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_025207D28GCP2B6_HUMANPolymorphism33980385DG28G
02UniProtVAR_033819R29PCP2B6_HUMANPolymorphism34284776DK29P
03UniProtVAR_025208R29SCP2B6_HUMANPolymorphism33926104DK29S
04UniProtVAR_023564M46VCP2B6_HUMANPolymorphism35303484DM46V
05UniProtVAR_023565G99ECP2B6_HUMANPolymorphism36060847DG99E
08UniProtVAR_016924P167ACP2B6_HUMANPolymorphism3826711DP167A
09UniProtVAR_016925Q172HCP2B6_HUMANPolymorphism3745274DQ172H
10UniProtVAR_016928S259RCP2B6_HUMANPolymorphism45482602DS259R
11UniProtVAR_016926K262RCP2B6_HUMANPolymorphism2279343DR262R
12UniProtVAR_025209N289KCP2B6_HUMANPolymorphism34277950DN289K
13UniProtVAR_025210T306SCP2B6_HUMANPolymorphism34698757DT306S
14UniProtVAR_024716I328TCP2B6_HUMANPolymorphism28399499DI328T
15UniProtVAR_023567I391NCP2B6_HUMANPolymorphism35979566DI391N
16UniProtVAR_016929R487CCP2B6_HUMANPolymorphism3211371DR487C

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 5 (14, 14)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_025207D28GCP2B6_HUMANPolymorphism33980385EG28G
02UniProtVAR_033819R29PCP2B6_HUMANPolymorphism34284776EK29P
03UniProtVAR_025208R29SCP2B6_HUMANPolymorphism33926104EK29S
04UniProtVAR_023564M46VCP2B6_HUMANPolymorphism35303484EM46V
05UniProtVAR_023565G99ECP2B6_HUMANPolymorphism36060847EG99E
08UniProtVAR_016924P167ACP2B6_HUMANPolymorphism3826711EP167A
09UniProtVAR_016925Q172HCP2B6_HUMANPolymorphism3745274EQ172H
10UniProtVAR_016928S259RCP2B6_HUMANPolymorphism45482602ES259R
11UniProtVAR_016926K262RCP2B6_HUMANPolymorphism2279343ER262R
12UniProtVAR_025209N289KCP2B6_HUMANPolymorphism34277950EN289K
13UniProtVAR_025210T306SCP2B6_HUMANPolymorphism34698757ET306S
14UniProtVAR_024716I328TCP2B6_HUMANPolymorphism28399499EI328T
15UniProtVAR_023567I391NCP2B6_HUMANPolymorphism35979566EI391N
16UniProtVAR_016929R487CCP2B6_HUMANPolymorphism3211371ER487C

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 6 (13, 13)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_025207D28GCP2B6_HUMANPolymorphism33980385FG28G
02UniProtVAR_033819R29PCP2B6_HUMANPolymorphism34284776FK29P
03UniProtVAR_025208R29SCP2B6_HUMANPolymorphism33926104FK29S
04UniProtVAR_023564M46VCP2B6_HUMANPolymorphism35303484FM46V
05UniProtVAR_023565G99ECP2B6_HUMANPolymorphism36060847FG99E
08UniProtVAR_016924P167ACP2B6_HUMANPolymorphism3826711FP167A
09UniProtVAR_016925Q172HCP2B6_HUMANPolymorphism3745274FQ172H
10UniProtVAR_016928S259RCP2B6_HUMANPolymorphism45482602FS259R
11UniProtVAR_016926K262RCP2B6_HUMANPolymorphism2279343FR262R
12UniProtVAR_025209N289KCP2B6_HUMANPolymorphism34277950FN289K
13UniProtVAR_025210T306SCP2B6_HUMANPolymorphism34698757FT306S
14UniProtVAR_024716I328TCP2B6_HUMANPolymorphism28399499FI328T
15UniProtVAR_023567I391NCP2B6_HUMANPolymorphism35979566FI391N

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (1, 6)

Asymmetric Unit (1, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CYTOCHROME_P450PS00086 Cytochrome P450 cysteine heme-iron ligand signature.CP2B6_HUMAN429-438
 
 
 
 
 
  6A:429-438
B:429-438
C:429-438
D:429-438
E:429-438
F:429-438
Biological Unit 1 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CYTOCHROME_P450PS00086 Cytochrome P450 cysteine heme-iron ligand signature.CP2B6_HUMAN429-438
 
 
 
 
 
  1A:429-438
-
-
-
-
-
Biological Unit 2 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CYTOCHROME_P450PS00086 Cytochrome P450 cysteine heme-iron ligand signature.CP2B6_HUMAN429-438
 
 
 
 
 
  1-
B:429-438
-
-
-
-
Biological Unit 3 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CYTOCHROME_P450PS00086 Cytochrome P450 cysteine heme-iron ligand signature.CP2B6_HUMAN429-438
 
 
 
 
 
  1-
-
C:429-438
-
-
-
Biological Unit 4 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CYTOCHROME_P450PS00086 Cytochrome P450 cysteine heme-iron ligand signature.CP2B6_HUMAN429-438
 
 
 
 
 
  1-
-
-
D:429-438
-
-
Biological Unit 5 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CYTOCHROME_P450PS00086 Cytochrome P450 cysteine heme-iron ligand signature.CP2B6_HUMAN429-438
 
 
 
 
 
  1-
-
-
-
E:429-438
-
Biological Unit 6 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CYTOCHROME_P450PS00086 Cytochrome P450 cysteine heme-iron ligand signature.CP2B6_HUMAN429-438
 
 
 
 
 
  1-
-
-
-
-
F:429-438

(-) Exons   (0, 0)

(no "Exon" information available for 3QU8)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:462
 aligned with CP2B6_HUMAN | P20813 from UniProtKB/Swiss-Prot  Length:491

    Alignment length:465
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         491 
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487   | 
          CP2B6_HUMAN    28 DRLPPGPRPLPLLGNLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFANGNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKYFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPKDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLTPQECGVGKIPPTYQIRFLPR-   -
               SCOP domains d3qu8a_ A: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhh...hhhhhhhhhhhhhh.eeeee....eeeee.hhhhhhhhhh.......ee.....hhhhhh.......hhhhhhhhhhhhhhhhhhh..---hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh.......ee....eee..eee....eeeehhhhhh............hhhhhh................hhhhh..hhhhhhhhhhhhhhhhhhheeee...hhhhh.....ee...ee......eeee.. Sec.struct. author
             SAPs(SNPs) (1) GP----------------V----------------------------------------------------E-------------------------------------------------------------------A----H--------------------------------------------------------------------------------------R--R--------------------------K----------------S---------------------T--------------------------------------------------------------N-----------------------------------------------------------------------------------------------C----- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -S------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CYTOCHROME------------------------------------------------------ PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3qu8 A  28 GKLPPGPRPLPLLGNLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFANGNRWKVLRRFSVTTMRDFGM---SVEERIQEEAQCLIEELRKSKGALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLTPQECGVGKIPPTYQIRFLPRH 492
                                    37        47        57        67        77        87        97       107       117       127       137   |   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487     
                                                                                                                                       137 141                                                                                                                                                                                                                                                                                                                                                               

Chain B from PDB  Type:PROTEIN  Length:459
 aligned with CP2B6_HUMAN | P20813 from UniProtKB/Swiss-Prot  Length:491

    Alignment length:465
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         491 
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487   | 
          CP2B6_HUMAN    28 DRLPPGPRPLPLLGNLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFANGNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKYFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPKDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLTPQECGVGKIPPTYQIRFLPR-   -
               SCOP domains d3qu8b_ B: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhh...hhhhhhhhhhhhhh.eeeeee..eeeeee.hhhhhhhhhh.......ee.....hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh------hhhhhhhhhhhhhhhhhhhh...ee.hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhh.hhhhhhhhhhhhhhhh.......ee....eee..eee....eeeehhhhhhh...........hhhhhh................hhhhh..hhhhhhhhhhhhhhhhhhhheee...hhhhh.....ee...ee.....eeee... Sec.struct. author
             SAPs(SNPs) (1) GP----------------V----------------------------------------------------E-------------------------------------------------------------------A----H--------------------------------------------------------------------------------------R--R--------------------------K----------------S---------------------T--------------------------------------------------------------N-----------------------------------------------------------------------------------------------C----- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -S------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CYTOCHROME------------------------------------------------------ PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3qu8 B  28 GKLPPGPRPLPLLGNLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFANGNRWKVLRRFSVTTMRD------SVEERIQEEAQCLIEELRKSKGALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLTPQECGVGKIPPTYQIRFLPRH 492
                                    37        47        57        67        77        87        97       107       117       127      |  -   |   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487     
                                                                                                                                    134    141                                                                                                                                                                                                                                                                                                                                                               

Chain C from PDB  Type:PROTEIN  Length:462
 aligned with CP2B6_HUMAN | P20813 from UniProtKB/Swiss-Prot  Length:491

    Alignment length:465
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         491 
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487   | 
          CP2B6_HUMAN    28 DRLPPGPRPLPLLGNLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFANGNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKYFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPKDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLTPQECGVGKIPPTYQIRFLPR-   -
               SCOP domains d3qu8c_ C: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhh...hhhhhhhhhhhhhh.eeeeee..eeeeeehhhhhhhhhhh.......ee.....hhhhhh.......hhhhhhhhhhhhhhhh..---...hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhh.hhhhhhhhhhhhhhhh.......ee....eee..eee....eeeehhhhhhh...........hhhhhh................hhhhh..hhhhhhhhhhhhhhhhhhheeee...hhhhh.....ee...ee......eeee.. Sec.struct. author
             SAPs(SNPs) (1) GP----------------V----------------------------------------------------E---------------------------------------EQ--------------------------A----H--------------------------------------------------------------------------------------R--R--------------------------K----------------S---------------------T--------------------------------------------------------------N-----------------------------------------------------------------------------------------------C----- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -S------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CYTOCHROME------------------------------------------------------ PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3qu8 C  28 GKLPPGPRPLPLLGNLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFANGNRWKVLRRFSVTTMRD---GKRSVEERIQEEAQCLIEELRKSKGALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLTPQECGVGKIPPTYQIRFLPRH 492
                                    37        47        57        67        77        87        97       107       117       127      |  -|      147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487     
                                                                                                                                    134 138                                                                                                                                                                                                                                                                                                                                                                  

Chain D from PDB  Type:PROTEIN  Length:458
 aligned with CP2B6_HUMAN | P20813 from UniProtKB/Swiss-Prot  Length:491

    Alignment length:464
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487    
          CP2B6_HUMAN    28 DRLPPGPRPLPLLGNLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFANGNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKYFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPKDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLTPQECGVGKIPPTYQIRFLPR 491
               SCOP domains d3qu8d_ D: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhh...hhhhhhhhhhhhhh.eeeeee..eeeeee.hhhhhhhhhh.......ee.....hhhhhh.......hhhhhhhhhhhhhhhhhh------hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhh.hhhhhhhhhhhhhhhh.......ee....eee..eee....eeeehhhhhhh...........hhhhhh................hhhhh..hhhhhhhhhhhhhhhhhhhheee...hhhhh.....ee...ee......eee.. Sec.struct. author
             SAPs(SNPs) (1) GP----------------V----------------------------------------------------E-------------------------------------------------------------------A----H--------------------------------------------------------------------------------------R--R--------------------------K----------------S---------------------T--------------------------------------------------------------N-----------------------------------------------------------------------------------------------C---- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -S------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs) (2)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CYTOCHROME----------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3qu8 D  28 GKLPPGPRPLPLLGNLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFANGNRWKVLRRFSVTTMRD------SVEERIQEEAQCLIEELRKSKGALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLTPQECGVGKIPPTYQIRFLPR 491
                                    37        47        57        67        77        87        97       107       117       127      |  -   |   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487    
                                                                                                                                    134    141                                                                                                                                                                                                                                                                                                                                                              

Chain E from PDB  Type:PROTEIN  Length:459
 aligned with CP2B6_HUMAN | P20813 from UniProtKB/Swiss-Prot  Length:491

    Alignment length:465
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         491 
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487   | 
          CP2B6_HUMAN    28 DRLPPGPRPLPLLGNLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFANGNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKYFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPKDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLTPQECGVGKIPPTYQIRFLPR-   -
               SCOP domains d3qu8e_ E: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhh...hhhhhhhhhhhhhh.eeeeee..eeeeee.hhhhhhhhhh.......ee.....hhhhhh.......hhhhhhhhhhhhhhhhhh------hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhh.hhhhhhhhhhhhhhhh.......ee....eee..eee....eeeehhhhhh............hhhhhh................hhhhh..hhhhhhhhhhhhhhhhhhhh.ee.............ee...ee......ee.... Sec.struct. author
             SAPs(SNPs) (1) GP----------------V----------------------------------------------------E-------------------------------------------------------------------A----H--------------------------------------------------------------------------------------R--R--------------------------K----------------S---------------------T--------------------------------------------------------------N-----------------------------------------------------------------------------------------------C----- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -S------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CYTOCHROME------------------------------------------------------ PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3qu8 E  28 GKLPPGPRPLPLLGNLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFANGNRWKVLRRFSVTTMRD------SVEERIQEEAQCLIEELRKSKGALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLTPQECGVGKIPPTYQIRFLPRH 492
                                    37        47        57        67        77        87        97       107       117       127      |  -   |   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487     
                                                                                                                                    134    141                                                                                                                                                                                                                                                                                                                                                               

Chain F from PDB  Type:PROTEIN  Length:453
 aligned with CP2B6_HUMAN | P20813 from UniProtKB/Swiss-Prot  Length:491

    Alignment length:459
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477         
          CP2B6_HUMAN    28 DRLPPGPRPLPLLGNLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFANGNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKYFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPKDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLTPQECGVGKIPPTYQI 486
               SCOP domains d3qu8f_ F: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhh...hhhhhhhhhhhhhh.eeeeee..eeeeee.hhhhhhhhhh.hhhhhhee.....hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh------hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhh.hhhhhhhhhhhhhhhh.......ee....eee..eee....eeeehhhhhhh...........hhhhhh................hhhhh..hhhhhhhhhhhhhhhhhhhh......hhhhh.....ee...ee...... Sec.struct. author
             SAPs(SNPs) (1) GP----------------V----------------------------------------------------E-------------------------------------------------------------------A----H--------------------------------------------------------------------------------------R--R--------------------------K----------------S---------------------T--------------------------------------------------------------N----------------------------------------------------------------------------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -S------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CYTOCHROME------------------------------------------------ PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3qu8 F  28 GKLPPGPRPLPLLGNLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFANGNRWKVLRRFSVTTMRD------SVEERIQEEAQCLIEELRKSKGALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLTPQECGVGKIPPTYQI 486
                                    37        47        57        67        77        87        97       107       117       127      |  -   |   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477         
                                                                                                                                    134    141                                                                                                                                                                                                                                                                                                                                                         

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3QU8)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3QU8)

(-) Gene Ontology  (22, 22)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (CP2B6_HUMAN | P20813)
molecular function
    GO:0008392    arachidonic acid epoxygenase activity    Catalysis of an NADPH- and oxygen-dependent reaction that converts arachidonic acid to a cis-epoxyeicosatrienoic acid.
    GO:0020037    heme binding    Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
    GO:0005506    iron ion binding    Interacting selectively and non-covalently with iron (Fe) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0004497    monooxygenase activity    Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016705    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen    Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.
    GO:0016712    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen    Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor.
    GO:0019825    oxygen binding    Interacting selectively and non-covalently with oxygen (O2).
    GO:0008395    steroid hydroxylase activity    Catalysis of the formation of a hydroxyl group on a steroid by incorporation of oxygen from O2.
biological process
    GO:0042180    cellular ketone metabolic process    The chemical reactions and pathways involving any of a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms, as carried out by individual cells. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.
    GO:0017144    drug metabolic process    The chemical reactions and pathways involving a drug, a substance used in the diagnosis, treatment or prevention of a disease; as used here antibiotic substances (see antibiotic metabolism) are considered to be drugs, even if not used in medical or veterinary practice.
    GO:0019373    epoxygenase P450 pathway    The chemical reactions and pathways by which arachidonic acid is converted to other compounds including epoxyeicosatrienoic acids and dihydroxyeicosatrienoic acids.
    GO:0042738    exogenous drug catabolic process    The chemical reactions and pathways resulting in the breakdown of a drug that has originated externally to the cell or organism.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0008202    steroid metabolic process    The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.
    GO:0006805    xenobiotic metabolic process    The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide.
cellular component
    GO:0005783    endoplasmic reticulum    The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
    GO:0005789    endoplasmic reticulum membrane    The lipid bilayer surrounding the endoplasmic reticulum.
    GO:0043231    intracellular membrane-bounded organelle    Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0031090    organelle membrane    A membrane that is one of the two lipid bilayers of an organelle envelope or the outermost membrane of single membrane bound organelle.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    3QU  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    CM5  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    HEM  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 3qu8)
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]
    Biological Unit 3  [ Jena3D ]
    Biological Unit 4  [ Jena3D ]
    Biological Unit 5  [ Jena3D ]
    Biological Unit 6  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  3qu8
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  CP2B6_HUMAN | P20813
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  1.14.14.1
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  CP2B6_HUMAN | P20813
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CP2B6_HUMAN | P208133ibd 3qoa 3ua5 4i91 4rql 4rrt 4zv8 5uap 5uda 5uec 5ufg

(-) Related Entries Specified in the PDB File

3ibd THE SAME PROTEIN COMPLEXED WITH 4-(4-CHLOROPHENYL)IMIDAZOLE
3qoa THE SAME PROTEIN COMPLEXED WITH 4-BENZYLPYRIDINE