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(-) Description

Title :  CRYSTAL STRUCTURE ANALYSIS OF THE CLATHRIN TRIMERIZATION DOMAIN
 
Authors :  J. A. Ybe, S. Mishra, J. Nix
Date :  27 Jan 11  (Deposition) - 01 Feb 12  (Release) - 19 Jun 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.92
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X
Biol. Unit 1:  A,B,C  (1x)
Biol. Unit 2:  D,E,F  (1x)
Biol. Unit 3:  G,H,I  (1x)
Biol. Unit 4:  J,K,L  (1x)
Biol. Unit 5:  M,N,O  (1x)
Biol. Unit 6:  P,Q,R  (1x)
Biol. Unit 7:  S,T,U  (1x)
Biol. Unit 8:  V,W,X  (1x)
Keywords :  Clathrin Trimerization Domain, Endocytosis, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. A. Ybe, S. N. Fontaine, T. Stone, J. Nix, X. Lin, S. Mishra
Nuclear Localization Of Clathrin Involves A Labile Helix Outside The Trimerization Domain.
Febs Lett. V. 587 142 2013
PubMed-ID: 23178717  |  Reference-DOI: 10.1016/J.FEBSLET.2012.11.005

(-) Compounds

Molecule 1 - CLATHRIN HEAVY CHAIN 1
    Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15B
    Expression System Strain: ROSETTA 2(DE3)PLYSS
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: CLATHRIN TRIMERIZATION DOMAIN
    Gene: CLTC
    Mutation: YES
    Organism Common: BOVINE,COW,DOMESTIC CATTLE,DOMESTIC COW
    Organism Scientific: BOS TAURUS
    Organism Taxid: 9913

 Structural Features

(-) Chains, Units

  123456789101112131415161718192021222324
Asymmetric Unit : ABCDEFGHIJKLMNOPQRSTUVWX
Biological Unit 1 (1x): ABC                     
Biological Unit 2 (1x):    DEF                  
Biological Unit 3 (1x):       GHI               
Biological Unit 4 (1x):          JKL            
Biological Unit 5 (1x):             MNO         
Biological Unit 6 (1x):                PQR      
Biological Unit 7 (1x):                   STU   
Biological Unit 8 (1x):                      VWX

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3QIL)

(-) Sites  (0, 0)

(no "Site" information available for 3QIL)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3QIL)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3QIL)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3QIL)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3QIL)

(-) Exons   (0, 0)

(no "Exon" information available for 3QIL)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:125
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:173
                                  1461      1471      1481      1491      1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
          CLH1_BOVIN   1452 LRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............------------------------------.....------------------..................hhhhhh......hhhhhhhhhhhh...hhhhhhhhhhhhh.....hhhhhh............hhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3qil A 1500 MGSSHHHHHHSS------------------------------GLVPR------------------GSHMWKQSVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1509 |       -         -         -  |   |  -         -     |1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
                                    1511                           1512   |               1517                                                                                                           
                                                                       1516                                                                                                                              


Chain B from PDB  Type:PROTEIN  Length:97
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:97
                                  1537      1547      1557      1567      1577      1587      1597      1607      1617       
          CLH1_BOVIN   1528 CKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhh.hhhhhhhhhhhhh..hhhhhhhhhhhhhh.......hhhhh.............hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------- Transcript
                3qil B 1528 AKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1537      1547      1557      1567      1577      1587      1597      1607      1617       


Chain C from PDB  Type:PROTEIN  Length:125
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:173
                                  1461      1471      1481      1491      1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
          CLH1_BOVIN   1452 LRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............------------------------------.....------------------...................hhhhhhh...hhhhhhhhhhh...........hhhhhh......hhhhhh.................hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3qil C 1500 MGSSHHHHHHSS------------------------------GLVPR------------------GSHMWKQSVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1509 |       -         -         -  |   |  -         -     |1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
                                    1511                           1512   |               1517                                                                                                           
                                                                       1516                                                                                                                              


Chain D from PDB  Type:PROTEIN  Length:125
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:173
                                  1461      1471      1481      1491      1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
          CLH1_BOVIN   1452 LRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............------------------------------.....------------------..................hhhhhh......hhhhhhhhhhhh...hhhhhhhhhhhhh.....hhhhhh............hhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3qil D 1500 MGSSHHHHHHSS------------------------------GLVPR------------------GSHMWKQSVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1509 |       -         -         -  |   |  -         -     |1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
                                    1511                           1512   |               1517                                                                                                           
                                                                       1516                                                                                                                              


Chain E from PDB  Type:PROTEIN  Length:97
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:97
                                  1537      1547      1557      1567      1577      1587      1597      1607      1617       
          CLH1_BOVIN   1528 CKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhh.....hhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhh...............hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------- Transcript
                3qil E 1528 AKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1537      1547      1557      1567      1577      1587      1597      1607      1617       


Chain F from PDB  Type:PROTEIN  Length:125
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:173
                                  1461      1471      1481      1491      1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
          CLH1_BOVIN   1452 LRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............------------------------------.....------------------...................hhhhhhhhh.hhhhhhhhhhh...........hhhhhh......hhhhhh.................hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3qil F 1500 MGSSHHHHHHSS------------------------------GLVPR------------------GSHMWKQSVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1509 |       -         -         -  |   |  -         -     |1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
                                    1511                           1512   |               1517                                                                                                           
                                                                       1516                                                                                                                              


Chain G from PDB  Type:PROTEIN  Length:125
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:173
                                  1461      1471      1481      1491      1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
          CLH1_BOVIN   1452 LRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............------------------------------.....------------------..................hhhhhh......hhhhhhhhhhhh...hhhhhhhhhhhhh.....hhhhhh............hhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3qil G 1500 MGSSHHHHHHSS------------------------------GLVPR------------------GSHMWKQSVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1509 |       -         -         -  |   |  -         -     |1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
                                    1511                           1512   |               1517                                                                                                           
                                                                       1516                                                                                                                              


Chain H from PDB  Type:PROTEIN  Length:97
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:97
                                  1537      1547      1557      1567      1577      1587      1597      1607      1617       
          CLH1_BOVIN   1528 CKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhh.hhhhhh.hhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhh............hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------- Transcript
                3qil H 1528 AKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1537      1547      1557      1567      1577      1587      1597      1607      1617       


Chain I from PDB  Type:PROTEIN  Length:125
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:173
                                  1461      1471      1481      1491      1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
          CLH1_BOVIN   1452 LRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............------------------------------.....------------------...................hhhhhhh...hhhhhhhhhhh...........hhhhhh......hhhhhhhhh..............hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3qil I 1500 MGSSHHHHHHSS------------------------------GLVPR------------------GSHMWKQSVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1509 |       -         -         -  |   |  -         -     |1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
                                    1511                           1512   |               1517                                                                                                           
                                                                       1516                                                                                                                              


Chain J from PDB  Type:PROTEIN  Length:125
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:173
                                  1461      1471      1481      1491      1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
          CLH1_BOVIN   1452 LRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............------------------------------.....------------------..................hhhhhh......hhhhhhhhhhhhhh.hhhhhhhhhhhhh.....hhhhhh............hhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3qil J 1500 MGSSHHHHHHSS------------------------------GLVPR------------------GSHMWKQSVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1509 |       -         -         -  |   |  -         -     |1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
                                    1511                           1512   |               1517                                                                                                           
                                                                       1516                                                                                                                              


Chain K from PDB  Type:PROTEIN  Length:97
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:97
                                  1537      1547      1557      1567      1577      1587      1597      1607      1617       
          CLH1_BOVIN   1528 CKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhh.hhhhhh.hhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhh............hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------- Transcript
                3qil K 1528 AKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1537      1547      1557      1567      1577      1587      1597      1607      1617       


Chain L from PDB  Type:PROTEIN  Length:125
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:173
                                  1461      1471      1481      1491      1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
          CLH1_BOVIN   1452 LRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............------------------------------.....------------------...................hhhhhhh...hhhhhhhhhhh...........hhhhhh......hhhhhh.................hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3qil L 1500 MGSSHHHHHHSS------------------------------GLVPR------------------GSHMWKQSVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1509 |       -         -         -  |   |  -         -     |1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
                                    1511                           1512   |               1517                                                                                                           
                                                                       1516                                                                                                                              


Chain M from PDB  Type:PROTEIN  Length:125
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:173
                                  1461      1471      1481      1491      1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
          CLH1_BOVIN   1452 LRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............------------------------------.....------------------..................hhhhhh......hhhhhhhhhhhh...hhhhhhhhhhhhh.....hhhhhh............hhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3qil M 1500 MGSSHHHHHHSS------------------------------GLVPR------------------GSHMWKQSVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1509 |       -         -         -  |   |  -         -     |1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
                                    1511                           1512   |               1517                                                                                                           
                                                                       1516                                                                                                                              


Chain N from PDB  Type:PROTEIN  Length:97
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:97
                                  1537      1547      1557      1567      1577      1587      1597      1607      1617       
          CLH1_BOVIN   1528 CKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhh.hhhhhhhhhhhhh..hhhhhhhhhhhhhh....hhhhhh...............hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------- Transcript
                3qil N 1528 AKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1537      1547      1557      1567      1577      1587      1597      1607      1617       


Chain O from PDB  Type:PROTEIN  Length:125
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:173
                                  1461      1471      1481      1491      1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
          CLH1_BOVIN   1452 LRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............------------------------------.....------------------...................hhhhhhhhh.hhhhhhhhhhh...........hhhhhh......hhhhhh.................hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3qil O 1500 MGSSHHHHHHSS------------------------------GLVPR------------------GSHMWKQSVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1509 |       -         -         -  |   |  -         -     |1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
                                    1511                           1512   |               1517                                                                                                           
                                                                       1516                                                                                                                              


Chain P from PDB  Type:PROTEIN  Length:125
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:173
                                  1461      1471      1481      1491      1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
          CLH1_BOVIN   1452 LRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............------------------------------.....------------------..................hhhhhh......hhhhhhhhhhhh...hhhhhhhhhhhhh.....hhhhhh............hhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3qil P 1500 MGSSHHHHHHSS------------------------------GLVPR------------------GSHMWKQSVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1509 |       -         -         -  |   |  -         -     |1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
                                    1511                           1512   |               1517                                                                                                           
                                                                       1516                                                                                                                              


Chain Q from PDB  Type:PROTEIN  Length:97
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:97
                                  1537      1547      1557      1567      1577      1587      1597      1607      1617       
          CLH1_BOVIN   1528 CKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhh.hhhhhhh........hhhhhhhhhhhhhh....hhhhhhhhh............hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------- Transcript
                3qil Q 1528 AKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1537      1547      1557      1567      1577      1587      1597      1607      1617       


Chain R from PDB  Type:PROTEIN  Length:125
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:173
                                  1461      1471      1481      1491      1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
          CLH1_BOVIN   1452 LRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............------------------------------.....------------------...................hhhhhhh...hhhhhhhhhhh........hhhhhhhhh......hhhhhhhhh..............hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3qil R 1500 MGSSHHHHHHSS------------------------------GLVPR------------------GSHMWKQSVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1509 |       -         -         -  |   |  -         -     |1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
                                    1511                           1512   |               1517                                                                                                           
                                                                       1516                                                                                                                              


Chain S from PDB  Type:PROTEIN  Length:125
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:173
                                  1461      1471      1481      1491      1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
          CLH1_BOVIN   1452 LRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............------------------------------.....------------------..................hhhhhh......hhhhhhhhhhhhhh.hhhhhhhhhhhhh.....hhhhhh............hhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3qil S 1500 MGSSHHHHHHSS------------------------------GLVPR------------------GSHMWKQSVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1509 |       -         -         -  |   |  -         -     |1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
                                    1511                           1512   |               1517                                                                                                           
                                                                       1516                                                                                                                              


Chain T from PDB  Type:PROTEIN  Length:97
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:97
                                  1537      1547      1557      1567      1577      1587      1597      1607      1617       
          CLH1_BOVIN   1528 CKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhh.hhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhh............hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------- Transcript
                3qil T 1528 AKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1537      1547      1557      1567      1577      1587      1597      1607      1617       


Chain U from PDB  Type:PROTEIN  Length:125
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:173
                                  1461      1471      1481      1491      1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
          CLH1_BOVIN   1452 LRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............------------------------------.....------------------...................hhhhhhh...hhhhhhhhhhh...........hhhhhh......hhhhhh.................hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3qil U 1500 MGSSHHHHHHSS------------------------------GLVPR------------------GSHMWKQSVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1509 |       -         -         -  |   |  -         -     |1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
                                    1511                           1512   |               1517                                                                                                           
                                                                       1516                                                                                                                              


Chain V from PDB  Type:PROTEIN  Length:125
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:173
                                  1461      1471      1481      1491      1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
          CLH1_BOVIN   1452 LRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............------------------------------.....------------------..................hhhhhh......hhhhhhhhhhhhhh.hhhhhhhhhhhhh.....hhhhhhhh..........hhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3qil V 1500 MGSSHHHHHHSS------------------------------GLVPR------------------GSHMWKQSVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1509 |       -         -         -  |   |  -         -     |1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
                                    1511                           1512   |               1517                                                                                                           
                                                                       1516                                                                                                                              


Chain W from PDB  Type:PROTEIN  Length:97
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:97
                                  1537      1547      1557      1567      1577      1587      1597      1607      1617       
          CLH1_BOVIN   1528 CKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhh........hhhhhhhhhhhhh..hhhhhhhhhhhhhh....hhhhhhhhh............hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------- Transcript
                3qil W 1528 AKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1537      1547      1557      1567      1577      1587      1597      1607      1617       


Chain X from PDB  Type:PROTEIN  Length:125
 aligned with CLH1_BOVIN | P49951 from UniProtKB/Swiss-Prot  Length:1675

    Alignment length:173
                                  1461      1471      1481      1491      1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
          CLH1_BOVIN   1452 LRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............------------------------------.....------------------...................hhhhhhh...hhhhhhhhhhh........hhhhhhhhh......hhhhhh.................hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3qil X 1500 MGSSHHHHHHSS------------------------------GLVPR------------------GSHMWKQSVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLELAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEE 1624
                                  1509 |       -         -         -  |   |  -         -     |1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621   
                                    1511                           1512   |               1517                                                                                                           
                                                                       1516
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3QIL)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3QIL)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3QIL)

(-) Gene Ontology  (13, 13)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X   (CLH1_BOVIN | P49951)
molecular function
    GO:0005198    structural molecule activity    The action of a molecule that contributes to the structural integrity of a complex or its assembly within or outside a cell.
biological process
    GO:0006886    intracellular protein transport    The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
    GO:1900126    negative regulation of hyaluronan biosynthetic process    Any process that stops, prevents or reduces the frequency, rate or extent of hyaluronan biosynthetic process.
    GO:0016192    vesicle-mediated transport    A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
cellular component
    GO:0030132    clathrin coat of coated pit    The coat found on coated pits and the coated vesicles derived from coated pits; comprises clathrin and the AP-2 adaptor complex.
    GO:0030130    clathrin coat of trans-Golgi network vesicle    A clathrin coat found on a vesicle of the trans-Golgi network.
    GO:0005905    clathrin-coated pit    A part of the endomembrane system in the form of an invagination of a membrane upon which a clathrin coat forms, and that can be converted by vesicle budding into a clathrin-coated vesicle. Coated pits form on the plasma membrane, where they are involved in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane, in the trans-Golgi network, and on some endosomes.
    GO:0031410    cytoplasmic vesicle    A vesicle found in the cytoplasm of a cell.
    GO:0030659    cytoplasmic vesicle membrane    The lipid bilayer surrounding a cytoplasmic vesicle.
    GO:0042470    melanosome    A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0030117    membrane coat    Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

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  3qil
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  CLH1_BOVIN | P49951
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CLH1_BOVIN | P49951: 1b89 1utc 1xi4 1xi5 3gc3 3gd1 3iyv 3lvg 3lvh 5m5r 5m5s 5m5t 5m5u 5m5v 5m61

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 3QIL)