3N8F - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF THE COMPLEX OF GOAT LACTOPEROXIDASE WITH THIOCYANATE AT 3.2 A RESOLUTION

Authors :   G. Vikram, A. K. Singh, R. P. Singh, M. Sinha, P. Kaur, S. Sharma, T. P. Sin

Date :   28 May 10 (Deposition) - 14 Jul 10 (Release) - 14 Jul 10 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.25

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Lactoperoxidase, Complex, Thiocyanate, Nitrate, Milk Protein, Metal Binding Protein, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   G. Vikram, A. K. Singh, R. P. Singh, M. Sinha, P. Kaur, S. Sharma, T. P. Singh
Crystal Structure Of The Complex Of Goat Lactoperoxidase With Thiocyanate At 3. 2 A Resolution
To Be Published
PubMed: search

Molecule 1 - LACTOPEROXIDASE
	Chains	:	A, B
	EC Number	:	1.11.1.7
	Fragment	:	RESIDUES 1-595
	Organism Common	:	GOATS
	Organism Scientific	:	CAPRA HIRCUS
	Organism Taxid	:	9925

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (7, 30)

No.	Name	Count	Type	Full Name
1	BMA	2	Ligand/Ion	BETA-D-MANNOSE
2	CA	2	Ligand/Ion	CALCIUM ION
3	HEM	2	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
4	NAG	16	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE
5	NO3	4	Ligand/Ion	NITRATE ION
6	SCN	2	Ligand/Ion	THIOCYANATE ION
7	SEP	2	Mod. Amino Acid	PHOSPHOSERINE

Biological Unit 1 (6, 14)

No.	Name	Count	Type	Full Name
1	BMA	1	Ligand/Ion	BETA-D-MANNOSE
2	CA	-1	Ligand/Ion	CALCIUM ION
3	HEM	1	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
4	NAG	8	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE
5	NO3	2	Ligand/Ion	NITRATE ION
6	SCN	1	Ligand/Ion	THIOCYANATE ION
7	SEP	1	Mod. Amino Acid	PHOSPHOSERINE

Biological Unit 2 (6, 14)

No.	Name	Count	Type	Full Name
1	BMA	1	Ligand/Ion	BETA-D-MANNOSE
2	CA	-1	Ligand/Ion	CALCIUM ION
3	HEM	1	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
4	NAG	8	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE
5	NO3	2	Ligand/Ion	NITRATE ION
6	SCN	1	Ligand/Ion	THIOCYANATE ION
7	SEP	1	Mod. Amino Acid	PHOSPHOSERINE

Asymmetric Unit (28, 28)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASN A:95 , ARG A:96 , ILE A:315 , ARG A:504 , GLN A:568 , NAG A:597	BINDING SITE FOR RESIDUE NAG A 596
02	AC2	SOFTWARE	NAG A:596 , HOH A:735 , HOH A:834	BINDING SITE FOR RESIDUE NAG A 597
03	AC3	SOFTWARE	ASN A:205 , ALA A:214 , VAL A:215 , GLN A:217 , NAG A:600 , LEU B:206	BINDING SITE FOR RESIDUE NAG A 599
04	AC4	SOFTWARE	TRP A:220 , NAG A:599 , BMA A:601 , LEU B:206 , SER B:207	BINDING SITE FOR RESIDUE NAG A 600
05	AC5	SOFTWARE	NAG A:600 , SER B:207	BINDING SITE FOR RESIDUE BMA A 601
06	AC6	SOFTWARE	ASN A:241 , ALA A:244 , TRP A:384 , NAG A:603 , HOH A:632 , PHE B:70	BINDING SITE FOR RESIDUE NAG A 602
07	AC7	SOFTWARE	NAG A:602 , LYS B:485	BINDING SITE FOR RESIDUE NAG A 603
08	AC8	SOFTWARE	ASN A:332 , NAG A:606	BINDING SITE FOR RESIDUE NAG A 605
09	AC9	SOFTWARE	NAG A:605	BINDING SITE FOR RESIDUE NAG A 606
10	BC1	SOFTWARE	GLU A:363 , TYR A:365 , ARG A:397 , THR A:560 , LYS A:561 , TYR A:572	BINDING SITE FOR RESIDUE NO3 A 607
11	BC2	SOFTWARE	ALA A:44 , ARG A:45 , TRP A:46 , LEU A:47 , ASN A:341 , VAL A:342 , TRP A:452	BINDING SITE FOR RESIDUE NO3 A 608
12	BC3	SOFTWARE	ASP A:110 , THR A:184 , PHE A:186 , ASP A:188 , SER A:190	BINDING SITE FOR RESIDUE CA A 704
13	BC4	SOFTWARE	ARG A:255 , GLU A:258 , HEM A:801 , HOH A:927	BINDING SITE FOR RESIDUE SCN A 901
14	BC5	SOFTWARE	MET A:101 , GLY A:104 , GLN A:105 , ASP A:108 , ASP A:112 , PHE A:113 , ALA A:114 , ARG A:255 , GLU A:258 , GLN A:259 , ARG A:348 , HIS A:351 , PHE A:380 , ARG A:440 , SCN A:901 , HOH A:927	BINDING SITE FOR RESIDUE HEM A 801
15	BC6	SOFTWARE	ASN B:95 , ILE B:315 , GLN B:568 , NAG B:597	BINDING SITE FOR RESIDUE NAG B 596
16	BC7	SOFTWARE	NAG B:596 , HOH B:834	BINDING SITE FOR RESIDUE NAG B 597
17	BC8	SOFTWARE	ASN B:205 , SER B:208 , LEU B:210 , VAL B:215 , GLN B:217 , NAG B:600	BINDING SITE FOR RESIDUE NAG B 599
18	BC9	SOFTWARE	TRP B:220 , NAG B:599 , BMA B:601 , HOH B:927	BINDING SITE FOR RESIDUE NAG B 600
19	CC1	SOFTWARE	NAG B:600 , HOH B:927	BINDING SITE FOR RESIDUE BMA B 601
20	CC2	SOFTWARE	PHE A:70 , ASN B:241 , ALA B:244 , NAG B:603	BINDING SITE FOR RESIDUE NAG B 602
21	CC3	SOFTWARE	LYS A:485 , NAG B:602	BINDING SITE FOR RESIDUE NAG B 603
22	CC4	SOFTWARE	ARG A:282 , ASN B:332 , NAG B:606 , HOH B:809	BINDING SITE FOR RESIDUE NAG B 605
23	CC5	SOFTWARE	NAG B:605	BINDING SITE FOR RESIDUE NAG B 606
24	CC6	SOFTWARE	GLU B:363 , ARG B:397 , HIS B:558 , ILE B:559 , THR B:560 , LYS B:561	BINDING SITE FOR RESIDUE NO3 B 607
25	CC7	SOFTWARE	ARG B:45 , TRP B:46 , LEU B:47 , ASN B:341 , VAL B:342 , TRP B:452	BINDING SITE FOR RESIDUE NO3 B 608
26	CC8	SOFTWARE	ASP B:110 , THR B:184 , PHE B:186 , ASP B:188 , SER B:190	BINDING SITE FOR RESIDUE CA B 724
27	CC9	SOFTWARE	MET B:101 , GLY B:104 , GLN B:105 , ASP B:108 , ASP B:112 , PHE B:113 , ALA B:114 , ARG B:255 , GLU B:258 , GLN B:259 , THR B:344 , PHE B:347 , ARG B:348 , GLY B:350 , HIS B:351 , PHE B:380 , ARG B:440 , SCN B:902 , HOH B:928	BINDING SITE FOR RESIDUE HEM B 821
28	DC1	SOFTWARE	GLU B:258 , HEM B:821 , HOH B:928	BINDING SITE FOR RESIDUE SCN B 902

Asymmetric Unit

No.	Residues
1	A:6	-	A:167
2	A:15	-	A:28
3	A:129	-	A:139
4	A:133	-	A:157
5	A:237	-	A:248
6	A:456	-	A:513
7	A:554	-	A:579
8	B:6	-	B:167
9	B:15	-	B:28
10	B:129	-	B:139
11	B:133	-	B:157
12	B:237	-	B:248
13	B:456	-	B:513
14	B:554	-	B:579

Asymmetric Unit

No.	Residues
1	Glu A:3	-	Val A:4
2	Lys A:233	-	Pro A:234
3	Gly A:445	-	Met A:446
4	Tyr A:572	-	Pro A:573
5	Lys B:233	-	Pro B:234
6	Tyr B:572	-	Pro B:573

(no "SAP(SNP)/Variant" information available for 3N8F)

(no "PROSITE Motif" information available for 3N8F)

(no "Exon" information available for 3N8F)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:595
 aligned with A3F9D6_CAPHI | A3F9D6 from UniProtKB/TrEMBL  Length:712

    Alignment length:595
                                   127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707     
         A3F9D6_CAPHI   118 SWEVGCGAPVPLVTCDEQSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLAVPFGWTQRKTRNGFRVPLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPETELGSSEHSKVQCEEYCVQGDECFPIMFPKNDPKLKTQGKCMPFFRAGFVCPTPPYQSLARDQINAVTSFLDASLVYGSEPSLASRLRNLSSPLGLMAVNQEAWDHGLAYPPFNNVKPSPCEFINTTAHVPCFQAGDSRASEQILLATVHTLLLREHNRLARELKRLNPHWDGEMLYQEARKILGAFIQIITFRDYLPIVLGSEMQKWIPPYQGYNNSVDPRISNVFTFAFRFGHMEVPSTVSRLDENYQPWGPEAELPLHTLFFNTWRIIKDGGIDPLVRGLLAKNSKLMNQNKMVTSELRNKLFQPTHKVHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQAVLKNKVLAKKLLDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENPGVFTEKQRDSLQKVSFSRLICDNTHITKVPLHAFQANNYPHDFVDCSAVDKLDLSPWASREN 712
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........................................ee...............................hhhhhhhhhh........eeeeeehhhhhhhhhhhhhhh...........hhhhhhhh..........ee.....hhhhhh..ee.....................ee.......hhhhhh.hhhhhh..ee......ee.....................hhhhhh............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh................hhhhhhhhhhhh...ee...............ee.hhh...hhhhhh...hhhhhhhhhhheee........hhhhhh.ee......eeehhhhhhhhhhhhhh..hhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhh...........hhhhhhhhh..hhhhhhhh.....eee............eee.hhh....hhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3n8f A   1 SWEVGCGAPVPLVTCDEQSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLAVPFGWTQRKTRNGFRVPLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPETELGSSEHSKVQCEEYCVQGDECFPIMFPKNDPKLKTQGKCMPFFRAGFVCPTPPYQSLARDQINAVTSFLDASLVYGSEPsLASRLRNLSSPLGLMAVNQEAWDHGLAYPPFNNVKPSPCEFINTTAHVPCFQAGDSRASEQILLATVHTLLLREHNRLARELKRLNPHWDGEMLYQEARKILGAFIQIITFRDYLPIVLGSEMQKWIPPYQGYNNSVDPRISNVFTFAFRFGHMEVPSTVSRLDENYQPWGPEAELPLHTLFFNTWRIIKDGGIDPLVRGLLAKNSKLMNQNKMVTSELRNKLFQPTHKVHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQAVLKNKVLAKKLLDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENPGVFTEKQRDSLQKVSFSRLICDNTHITKVPLHAFQANNYPHDFVDCSAVDKLDLSPWASREN 595
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590     
                                                                                                                                                                                                                               198-SEP

Chain B from PDB  Type:PROTEIN  Length:595
 aligned with A3F9D6_CAPHI | A3F9D6 from UniProtKB/TrEMBL  Length:712

    Alignment length:595
                                   127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707     
         A3F9D6_CAPHI   118 SWEVGCGAPVPLVTCDEQSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLAVPFGWTQRKTRNGFRVPLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPETELGSSEHSKVQCEEYCVQGDECFPIMFPKNDPKLKTQGKCMPFFRAGFVCPTPPYQSLARDQINAVTSFLDASLVYGSEPSLASRLRNLSSPLGLMAVNQEAWDHGLAYPPFNNVKPSPCEFINTTAHVPCFQAGDSRASEQILLATVHTLLLREHNRLARELKRLNPHWDGEMLYQEARKILGAFIQIITFRDYLPIVLGSEMQKWIPPYQGYNNSVDPRISNVFTFAFRFGHMEVPSTVSRLDENYQPWGPEAELPLHTLFFNTWRIIKDGGIDPLVRGLLAKNSKLMNQNKMVTSELRNKLFQPTHKVHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQAVLKNKVLAKKLLDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENPGVFTEKQRDSLQKVSFSRLICDNTHITKVPLHAFQANNYPHDFVDCSAVDKLDLSPWASREN 712
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) --------------------An_peroxidase-3n8fB01 B:21-567                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ---------------------------- Pfam domains (1)
           Pfam domains (2) --------------------An_peroxidase-3n8fB02 B:21-567                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ---------------------------- Pfam domains (2)
         Sec.struct. author ........................................ee...............................hhhhhhhhh.........eeeeeehhhhhhhhhhhhhhh...........hhhhhhhh..........ee.............ee.....................ee.......hhhhhh...hhhhhhee......ee.....................hhhhhh............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.hhhhhh................hhhhhhhhhhhh...ee...............ee.hhhh..hhhhhh...hhhhhhhhhhheee........hhhhhh.ee......eeehhhhhhhhhhhhh...hhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhh...........hhhhhhhhh..hhhhhh........................hhhhh....hhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3n8f B   1 SWEVGCGAPVPLVTCDEQSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLAVPFGWTQRKTRNGFRVPLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPETELGSSEHSKVQCEEYCVQGDECFPIMFPKNDPKLKTQGKCMPFFRAGFVCPTPPYQSLARDQINAVTSFLDASLVYGSEPsLASRLRNLSSPLGLMAVNQEAWDHGLAYPPFNNVKPSPCEFINTTAHVPCFQAGDSRASEQILLATVHTLLLREHNRLARELKRLNPHWDGEMLYQEARKILGAFIQIITFRDYLPIVLGSEMQKWIPPYQGYNNSVDPRISNVFTFAFRFGHMEVPSTVSRLDENYQPWGPEAELPLHTLFFNTWRIIKDGGIDPLVRGLLAKNSKLMNQNKMVTSELRNKLFQPTHKVHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQAVLKNKVLAKKLLDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENPGVFTEKQRDSLQKVSFSRLICDNTHITKVPLHAFQANNYPHDFVDCSAVDKLDLSPWASREN 595
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590     
                                                                                                                                                                                                                               198-SEP

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 3N8F)

(no "CATH Domain" information available for 3N8F)

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: no clan defined [family: An_peroxidase] (45)

Family: An_peroxidase (45)

Capra hircus (Goat) (6)

1a	An_peroxidase-3n8fB01	B:21-567
1b	An_peroxidase-3n8fB02	B:21-567

Asymmetric Unit(hide GO term definitions)

Chain A,B (A3F9D6_CAPHI | A3F9D6)

molecular function
	GO:0020037	heme binding	Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0004601	peroxidase activity	Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
	GO:0036393	thiocyanate peroxidase activity	Catalysis of the reaction: thiocyanate (SCN-) + hydrogen peroxide (H2O2) = hypothiocyanite (OSCN-) + 2 H2O. Catalyzes the hydrogen peroxide oxidation of thiocyanate.
biological process
	GO:0098869	cellular oxidant detoxification	Any process carried out at the cellular level that reduces or removes the toxicity superoxide radicals or hydrogen peroxide.
	GO:0042742	defense response to bacterium	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
	GO:0006979	response to oxidative stress	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
	GO:0018969	thiocyanate metabolic process	The chemical reactions and pathways involving thiocyanate, the anion of thiocyanic acid, a toxic cyanide derivative commonly formed as a by-product in the production of gas for fuel, coke, and substances for chemical industries.

Asymmetric Unit
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	Ligands, Modified Residues, Ions
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	Cis Peptide Bonds
		Glu A:3 - Val A:4	[ RasMol ]
		Gly A:445 - Met A:446	[ RasMol ]
		Lys A:233 - Pro A:234	[ RasMol ]
		Lys B:233 - Pro B:234	[ RasMol ]
		Tyr A:572 - Pro A:573	[ RasMol ]
		Tyr B:572 - Pro B:573	[ RasMol ]

Biological Units
	Complete Structure
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		Biological Unit 2	[ Jena3D ]

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	3n8f
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		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	A3F9D6_CAPHI \| A3F9D6
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (7, 30)

Sites (28, 28)

SS Bonds (14, 14)

Cis Peptide Bonds (6, 6)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (1, 2)

Gene Ontology (9, 9)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File