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(-) Description

Title :  ETHANOLAMINE UTILIZATION MICROCOMPARTMENT SHELL SUBUNIT, EUTL OPEN FORM
 
Authors :  S. Tanaka, M. R. Sawaya, T. O. Yeates
Date :  09 Jul 09  (Deposition) - 12 Jan 10  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (3x)
Keywords :  Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Tanaka, M. R. Sawaya, T. O. Yeates
Structure And Mechanisms Of A Protein-Based Organelle In Escherichia Coli.
Science V. 327 81 2010
PubMed-ID: 20044574  |  Reference-DOI: 10.1126/SCIENCE.1179513

(-) Compounds

Molecule 1 - ETHANOLAMINE UTILIZATION PROTEIN EUTL
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET22B
    Expression System Strain: BL21(DE3)GOLD
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: B2439, EUTL, JW2432, YFFJ
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 83333
    Strain: K-12

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (3x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1CL1Ligand/IonCHLORIDE ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL A:63 , SER A:134BINDING SITE FOR RESIDUE CL A 228

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3I87)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Ser A:78 -Pro A:79

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3I87)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3I87)

(-) Exons   (0, 0)

(no "Exon" information available for 3I87)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:209
 aligned with EUTL_ECOLI | P76541 from UniProtKB/Swiss-Prot  Length:219

    Alignment length:216
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211      
           EUTL_ECOLI     2 PALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQDTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQ 217
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .........eeeeeee...hhhhhhhh.......eeeeeee..hhhhhhhhhhhhhhh..ee.------.............eeeeeee.hhhhhhhhhhhhhhhhhhh...ee.......eeeeeee.....hhhhh........eeeeeehhhhhhhhhhhhhhhh..eeee.....-....eeeeee.hhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3i87 A   2 PALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAMVEVV------AGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQDTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPP-ETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQ 217
                                    11        21        31        41        51        61  |     71        81        91       101       111       121       131       141       151       161       171        |-|      191       201       211      
                                                                                         64     71                                                                                                          180 |                                   
                                                                                                                                                                                                              182
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3I87)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3I87)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3I87)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A   (EUTL_ECOLI | P76541)
molecular function
    GO:0005198    structural molecule activity    The action of a molecule that contributes to the structural integrity of a complex or its assembly within or outside a cell.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0046336    ethanolamine catabolic process    The chemical reactions and pathways resulting in the breakdown of ethanolamine (2-aminoethanol), an important water-soluble base of phospholipid (phosphatidylethanolamine).
    GO:0009605    response to external stimulus    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus.
cellular component
    GO:0031471    ethanolamine degradation polyhedral organelle    An organelle found in bacteria consisting of a proteinaceous coat containing enzymes for the degradation of ethanolamine whose purpose is the protection of the rest of the cell from the toxic acetaldehyde product of the enzyme ethanolamine ammonia lyase.

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  3i87
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        EUTL_ECOLI | P76541: 3gfh 3i82 3mpv

(-) Related Entries Specified in the PDB File

3i6p ETHANOLAMINE UTILIZATION MICROCOMPARTMENT SHELL SUBUNIT, EUTM
3i71 ETHANOLAMINE UTILIZATION MICROCOMPARTMENT SHELL SUBUNIT, EUTK C-TERMINAL DOMAIN
3i82 ETHANOLAMINE UTILIZATION MICROCOMPARTMENT SHELL SUBUNIT, EUTL CLOSED FORM
3i96 ETHANOLAMINE UTILIZATION MICROCOMPARTMENT SHELL SUBUNIT, EUTS
3ia0 ETHANOLAMINE UTILIZATION MICROCOMPARTMENT SHELL SUBUNIT, EUTS-G39V MUTANT