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(-) Description

Title :  STRUCTURE OF SULFOLOBUS SOLFATARICUS TRXR-B3
 
Authors :  A. Ruggiero, M. Masullo, M. R. Ruocco, P. Arcari, A. Zagari, L. Vitagliano
Date :  13 Nov 08  (Deposition) - 13 Jan 09  (Release) - 09 Jun 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Redox Protein, Nucleotide Binding, Fad, Flavoprotein, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Ruggiero, M. Masullo, M. R. Ruocco, P. Grimaldi, M. A. Lanzotti, P. Arcari, A. Zagari, L. Vitagliano
Structure And Stability Of A Thioredoxin Reductase From Sulfolobus Solfataricus: A Thermostable Protein With Two Functions
Biochim. Biophys. Acta V. 1794 554 2009
PubMed-ID: 19110078  |  Reference-DOI: 10.1016/J.BBAPAP.2008.11.011
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - THIOREDOXIN REDUCTASE (TRXB-3)
    Chains: A, B, C, D
    EC Number: 1.6.4.5
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET-28
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Scientific: SULFOLOBUS SOLFATARICUS
    Organism Taxid: 2287

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 11)

Asymmetric Unit (3, 11)
No.NameCountTypeFull Name
1ACY1Ligand/IonACETIC ACID
2NAD4Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
3SO46Ligand/IonSULFATE ION
Biological Unit 1 (3, 8)
No.NameCountTypeFull Name
1ACY1Ligand/IonACETIC ACID
2NAD2Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
3SO45Ligand/IonSULFATE ION
Biological Unit 2 (2, 3)
No.NameCountTypeFull Name
1ACY-1Ligand/IonACETIC ACID
2NAD2Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
3SO41Ligand/IonSULFATE ION

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS B:184 , ARG B:185 , HOH B:5237BINDING SITE FOR RESIDUE ACY B1501
02AC2SOFTWAREVAL A:21 , GLY A:22 , GLY A:24 , PRO A:25 , ALA A:26 , GLY A:45 , GLU A:46 , THR A:47 , GLY A:50 , GLN A:51 , ASP A:90 , VAL A:92 , GLY A:120 , ILE A:121 , GLY A:122 , GLY A:286 , ASP A:287 , HOH A:5054 , HOH A:5095 , HOH A:5190 , HOH A:5204BINDING SITE FOR RESIDUE NAD A4001
03AC3SOFTWAREGLY B:22 , LEU B:23 , GLY B:24 , PRO B:25 , ALA B:26 , GLY B:45 , GLU B:46 , THR B:47 , GLY B:50 , GLN B:51 , ASP B:90 , ILE B:91 , VAL B:92 , GLY B:120 , ILE B:121 , GLY B:122 , PHE B:255 , GLY B:286 , ASP B:287 , HOH B:5077 , HOH B:5098 , HOH B:5122BINDING SITE FOR RESIDUE NAD B4002
04AC4SOFTWAREVAL C:21 , GLY C:22 , LEU C:23 , GLY C:24 , PRO C:25 , ALA C:26 , ILE C:44 , GLY C:45 , GLU C:46 , THR C:47 , GLY C:50 , GLN C:51 , ASP C:90 , ILE C:91 , VAL C:92 , GLY C:120 , ILE C:121 , GLY C:122 , GLY C:286 , ASP C:287 , HOH C:5003 , HOH C:5026 , HOH C:5104 , HOH C:5213BINDING SITE FOR RESIDUE NAD C4003
05AC5SOFTWAREVAL D:21 , GLY D:22 , LEU D:23 , GLY D:24 , PRO D:25 , ALA D:26 , GLY D:45 , GLU D:46 , THR D:47 , GLY D:50 , GLN D:51 , ASP D:90 , ILE D:91 , VAL D:92 , GLY D:120 , ILE D:121 , GLY D:122 , GLY D:286 , ASP D:287 , HOH D:5008 , HOH D:5100BINDING SITE FOR RESIDUE NAD D4004
06AC6SOFTWAREHIS A:184 , ARG A:185 , ARG A:186 , LYS A:190BINDING SITE FOR RESIDUE SO4 A4157
07AC7SOFTWAREHIS B:184 , ARG B:185 , ARG B:186 , LYS B:190BINDING SITE FOR RESIDUE SO4 B4158
08AC8SOFTWAREGLY A:163 , SER A:165 , GLY A:248 , PHE A:249BINDING SITE FOR RESIDUE SO4 A4159
09AC9SOFTWAREPRO A:131 , GLY A:132 , GLU A:133 , GLN A:134 , GLU A:135BINDING SITE FOR RESIDUE SO4 A4160
10BC1SOFTWAREASP B:164 , SER B:165 , GLY B:248 , HOH B:5139 , HOH B:5265 , HOH B:5298BINDING SITE FOR RESIDUE SO4 B4161
11BC2SOFTWAREGLY D:163 , ASP D:164 , SER D:165 , GLY D:248 , ARG D:296 , HOH D:5195BINDING SITE FOR RESIDUE SO4 D4162

(-) SS Bonds  (4, 4)

Asymmetric Unit
No.Residues
1A:144 -A:147
2B:144 -B:147
3C:144 -C:147
4D:144 -D:147

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3F8P)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3F8P)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3F8P)

(-) Exons   (0, 0)

(no "Exon" information available for 3F8P)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:307
 aligned with Q8X236_SULSF | Q8X236 from UniProtKB/TrEMBL  Length:324

    Alignment length:311
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319 
         Q8X236_SULSF    10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKGQQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 320
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------3f8pA02 A:126-248  [code=3.50.50.60, no name defined]                                                                       ----------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeee..hhhhhhhhhhhhhh...eeeee...hhhhhhh.ee........eehhhhhhhhhhhhhhh...eee..eeeee.---.eeeee....eeeeeeeee....ee...............ee.hhhhhhhhhh..eeeee..hhhhhhhhhhhhhhh.eeeee.......-.hhhhhhhhhh...eeee..eeeeeeee...eeeeeeee.....eeeee..eeee...ee.hhhhhhhh......................eee............hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3f8p A  10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIEN---EFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK-AQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
                                    19        29        39        49        59        69        79        89       | - |     109       119       129       139       149       159       169       179       189| |    198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                                                                                  97 101                                                                                      190 |                                                                                                                                
                                                                                                                                                                                                                191                                                                                                                                


Chain A from PDB  Type:PROTEIN  Length:307
 aligned with Q97W27_SULSO | Q97W27 from UniProtKB/TrEMBL  Length:323

    Alignment length:310
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319
         Q97W27_SULSO    10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------3f8pA02 A:126-248  [code=3.50.50.60, no name defined]                                                                      ----------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeee..hhhhhhhhhhhhhh...eeeee...hhhhhhh.ee........eehhhhhhhhhhhhhhh...eee..eeeee.---.eeeee....eeeeeeeee....ee...............ee.hhhhhhhhhh..eeeee..hhhhhhhhhhhhhhh.eeeee........hhhhhhhhhh...eeee..eeeeeeee...eeeeeeee.....eeeee..eeee...ee.hhhhhhhh......................eee............hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3f8p A  10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIEN---EFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
                                    19        29        39        49        59        69        79        89       | - |     109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319
                                                                                                                  97 101                                                                                                                                                                                                                          


Chain B from PDB  Type:PROTEIN  Length:306
 aligned with Q8X236_SULSF | Q8X236 from UniProtKB/TrEMBL  Length:324

    Alignment length:311
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319 
         Q8X236_SULSF    10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKGQQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 320
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------3f8pB02 B:126-248  [code=3.50.50.60, no name defined]                                                                       ----------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeee..hhhhhhhhhhhhhh...eeeee...hhhhhhh.ee........eehhhhhhhhhhhhhh....eee..eeeee----.eeeee....eeeeeeeee....ee...............ee.hhhhhhhhhh..eeeee..hhhhhhhhhhhhh...eeeee.......-.hhhhhhhhhh...eeee..eeeeeeee...eeeeeeee.....eeeee..eeee...ee.hhhhhhhh......................eee............hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3f8p B  10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIE----EFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK-AQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
                                    19        29        39        49        59        69        79        89      |  - |     109       119       129       139       149       159       169       179       189| |    198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                                                                                 96  101                                                                                      190 |                                                                                                                                
                                                                                                                                                                                                                191                                                                                                                                


Chain B from PDB  Type:PROTEIN  Length:306
 aligned with Q97W27_SULSO | Q97W27 from UniProtKB/TrEMBL  Length:323

    Alignment length:310
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319
         Q97W27_SULSO    10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------3f8pB02 B:126-248  [code=3.50.50.60, no name defined]                                                                      ----------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeee..hhhhhhhhhhhhhh...eeeee...hhhhhhh.ee........eehhhhhhhhhhhhhh....eee..eeeee----.eeeee....eeeeeeeee....ee...............ee.hhhhhhhhhh..eeeee..hhhhhhhhhhhhh...eeeee........hhhhhhhhhh...eeee..eeeeeeee...eeeeeeee.....eeeee..eeee...ee.hhhhhhhh......................eee............hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3f8p B  10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIE----EFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
                                    19        29        39        49        59        69        79        89      |  - |     109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319
                                                                                                                 96  101                                                                                                                                                                                                                          


Chain C from PDB  Type:PROTEIN  Length:308
 aligned with Q8X236_SULSF | Q8X236 from UniProtKB/TrEMBL  Length:324

    Alignment length:312
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319  
         Q8X236_SULSF    10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKGQQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEKK 321
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------3f8pC02 C:126-248  [code=3.50.50.60, no name defined]                                                                       ------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeeeeee..hhhhhhhhhhhhhh...eeeee...hhhhhhh.ee........eehhhhhhhhhhhhhh....eee..eeeee.---.eeeee....eeeeeeeee....ee...............ee.hhhhhhhhhh..eeeee..hhhhhhhhhhhhhhh.eeeee.......-.hhhhhhhhhh...eeee..eeeeeeee...eeeeeeee.....eeeee..eeee...ee.hhhhhhhh......................eee............hhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3f8p C  10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIEN---EFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK-AQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEKK 320
                                    19        29        39        49        59        69        79        89       | - |     109       119       129       139       149       159       169       179       189| |    198       208       218       228       238       248       258       268       278       288       298       308       318  
                                                                                                                  97 101                                                                                      190 |                                                                                                                                 
                                                                                                                                                                                                                191                                                                                                                                 


Chain C from PDB  Type:PROTEIN  Length:308
 aligned with Q97W27_SULSO | Q97W27 from UniProtKB/TrEMBL  Length:323

    Alignment length:311
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319 
         Q97W27_SULSO    10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEKK 320
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------3f8pC02 C:126-248  [code=3.50.50.60, no name defined]                                                                      ------------------------------------------------------------------------ CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeee..hhhhhhhhhhhhhh...eeeee...hhhhhhh.ee........eehhhhhhhhhhhhhh....eee..eeeee.---.eeeee....eeeeeeeee....ee...............ee.hhhhhhhhhh..eeeee..hhhhhhhhhhhhhhh.eeeee........hhhhhhhhhh...eeee..eeeeeeee...eeeeeeee.....eeeee..eeee...ee.hhhhhhhh......................eee............hhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3f8p C  10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIEN---EFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEKK 320
                                    19        29        39        49        59        69        79        89       | - |     109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319 
                                                                                                                  97 101                                                                                                                                                                                                                           


Chain D from PDB  Type:PROTEIN  Length:310
 aligned with Q8X236_SULSF | Q8X236 from UniProtKB/TrEMBL  Length:324

    Alignment length:311
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319 
         Q8X236_SULSF    10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKGQQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 320
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------3f8pD02 D:126-248  [code=3.50.50.60, no name defined]                                                                       ----------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeee..hhhhhhhhhhhhhh...eeee....hhhhhhh.ee........eehhhhhhhhhhhhhh....ee...eeeeee....eeeee....eeeeeeeee....ee...............ee.hhhhhhhhhh..eeeee..hhhhhhhhhhhhh...eeeee.......-.hhhhhhhhhh...eeee..eeeeeeee...eeeeeeee.....eeeee..eeee...ee.hhhhhhhh......................eee............hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3f8p D  10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK-AQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189| |    198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                                                                                                                                                                              190 |                                                                                                                                
                                                                                                                                                                                                                191                                                                                                                                


Chain D from PDB  Type:PROTEIN  Length:310
 aligned with Q97W27_SULSO | Q97W27 from UniProtKB/TrEMBL  Length:323

    Alignment length:310
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319
         Q97W27_SULSO    10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------3f8pD02 D:126-248  [code=3.50.50.60, no name defined]                                                                      ----------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeee..hhhhhhhhhhhhhh...eeee....hhhhhhh.ee........eehhhhhhhhhhhhhh....ee...eeeeee....eeeee....eeeeeeeee....ee...............ee.hhhhhhhhhh..eeeee..hhhhhhhhhhhhh...eeeee........hhhhhhhhhh...eeee..eeeeeeee...eeeeeeee.....eeeee..eeee...ee.hhhhhhhh......................eee............hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3f8p D  10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3F8P)

(-) CATH Domains  (1, 4)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3F8P)

(-) Gene Ontology  (7, 12)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (Q97W27_SULSO | Q97W27)
molecular function
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0004791    thioredoxin-disulfide reductase activity    Catalysis of the reaction: NADP(+) + thioredoxin = H(+) + NADPH + thioredoxin disulfide.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0019430    removal of superoxide radicals    Any process, acting at the cellular level, involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2).
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Chain A,B,C,D   (Q8X236_SULSF | Q8X236)
molecular function
    GO:0003954    NADH dehydrogenase activity    Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0004791    thioredoxin-disulfide reductase activity    Catalysis of the reaction: NADP(+) + thioredoxin = H(+) + NADPH + thioredoxin disulfide.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0019430    removal of superoxide radicals    Any process, acting at the cellular level, involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2).
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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  Q97W27_SULSO | Q97W27
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        Q97W27_SULSO | Q97W27: 3f8d 3f8r
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(-) Related Entries Specified in the PDB File

3f8d C147A MUTANT
3f8r WILD-TYPE SSTRXRB3 IN COMPLEX WITH NAP