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(-) Description

Title :  CRYSTAL STRUCTURE OF SULFOLOBUS SOLFATARICUS THIOREDOXIN REDUCTASE B3 IN COMPLEX WITH TWO NADP MOLECULES
 
Authors :  A. Ruggiero, M. Masullo, M. R. Ruocco, P. Arcari, A. Zagari, L. Vitagliano
Date :  13 Nov 08  (Deposition) - 13 Jan 09  (Release) - 09 Jun 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.95
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Redox Protein, Nucleotide Binding, Fad, Flavoprotein, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Ruggiero, M. Masullo, M. R. Ruocco, P. Grimaldi, M. A. Lanzotti, P. Arcari, A. Zagari, L. Vitagliano
Structure And Stability Of A Thioredoxin Reductase From Sulfolobus Solfataricus: A Thermostable Protein With Two Functions
Biochim. Biophys. Acta V. 1794 554 2009
PubMed-ID: 19110078  |  Reference-DOI: 10.1016/J.BBAPAP.2008.11.011
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - THIOREDOXIN REDUCTASE (TRXB-3)
    Chains: A, B, C, D
    EC Number: 1.6.4.5
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET-28
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Scientific: SULFOLOBUS SOLFATARICUS
    Organism Taxid: 2287

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 8)

Asymmetric Unit (1, 8)
No.NameCountTypeFull Name
1NAP8Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1NAP4Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Biological Unit 2 (1, 4)
No.NameCountTypeFull Name
1NAP4Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:126 , LEU A:128 , GLY A:163 , ASP A:164 , SER A:165 , GLU A:168 , ARG A:185 , ARG A:186 , LYS A:190 , GLN A:192 , TYR A:195 , ILE A:247 , GLY A:248 , LEU A:293 , GLY A:294 , ARG A:296 , HOH A:5067 , HOH A:5128 , HOH A:5176 , HOH A:5179 , HOH A:5211 , ARG B:314BINDING SITE FOR RESIDUE NAP A4001
2AC2SOFTWAREARG A:314 , ARG B:126 , LEU B:128 , GLY B:163 , ASP B:164 , SER B:165 , ARG B:185 , ARG B:186 , LYS B:190 , GLN B:192 , TYR B:195 , ILE B:247 , GLY B:248 , LEU B:293 , GLY B:294 , HOH B:5001 , HOH B:5025 , HOH B:5036 , HOH B:5045 , HOH B:5050 , HOH B:5069 , HOH B:5085 , HOH B:5090 , HOH B:5184 , HOH B:5196 , HOH B:5198BINDING SITE FOR RESIDUE NAP B4002
3AC3SOFTWAREARG C:126 , LEU C:128 , ASP C:164 , SER C:165 , GLU C:168 , ARG C:185 , LYS C:190 , GLN C:192 , TYR C:195 , ILE C:247 , GLY C:248 , LEU C:293 , GLY C:294 , HOH C:5012 , HOH C:5113 , HOH C:5186 , ARG D:314BINDING SITE FOR RESIDUE NAP C4003
4AC4SOFTWAREARG C:314 , ARG D:126 , GLY D:163 , ASP D:164 , SER D:165 , ARG D:185 , ARG D:186 , LYS D:190 , GLN D:192 , TYR D:195 , ILE D:247 , GLY D:248 , LEU D:293 , GLY D:294 , HOH D:5109 , HOH D:5154 , HOH D:5182 , HOH D:5331BINDING SITE FOR RESIDUE NAP D4004
5AC5SOFTWAREGLY A:22 , LEU A:23 , GLY A:24 , PRO A:25 , ALA A:26 , GLY A:45 , GLU A:46 , THR A:47 , GLY A:50 , GLN A:51 , ASP A:90 , VAL A:92 , GLY A:120 , ILE A:121 , GLY A:122 , GLY A:286 , ASP A:287 , HOH A:5032 , HOH A:5046 , HOH A:5088 , HOH A:5223 , HOH A:5290 , HOH A:5296 , HOH A:5322BINDING SITE FOR RESIDUE NAP A4005
6AC6SOFTWAREVAL B:21 , GLY B:22 , LEU B:23 , GLY B:24 , PRO B:25 , ALA B:26 , GLY B:45 , GLU B:46 , THR B:47 , GLY B:50 , GLN B:51 , ASP B:90 , ILE B:91 , VAL B:92 , GLY B:120 , ILE B:121 , GLY B:122 , GLY B:286 , ASP B:287 , HOH B:5059 , HOH B:5071 , HOH B:5108 , HOH B:5264BINDING SITE FOR RESIDUE NAP B4006
7AC7SOFTWAREVAL C:21 , GLY C:22 , LEU C:23 , GLY C:24 , PRO C:25 , ALA C:26 , GLY C:45 , GLU C:46 , THR C:47 , GLY C:50 , GLN C:51 , ASP C:90 , ILE C:91 , VAL C:92 , GLY C:120 , ILE C:121 , GLY C:122 , GLY C:286 , ASP C:287 , HOH C:5003 , HOH C:5013 , HOH C:5018 , HOH C:5199 , HOH C:5249 , HOH C:5327BINDING SITE FOR RESIDUE NAP C4007
8AC8SOFTWAREGLY D:22 , LEU D:23 , GLY D:24 , PRO D:25 , ALA D:26 , GLY D:45 , GLU D:46 , THR D:47 , GLY D:50 , GLN D:51 , ASP D:90 , ILE D:91 , VAL D:92 , GLY D:120 , ILE D:121 , GLY D:122 , GLY D:286 , ASP D:287 , HOH D:5017 , HOH D:5144 , HOH D:5217 , HOH D:5325BINDING SITE FOR RESIDUE NAP D4008

(-) SS Bonds  (4, 4)

Asymmetric Unit
No.Residues
1A:144 -A:147
2B:144 -B:147
3C:144 -C:147
4D:144 -D:147

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3F8R)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3F8R)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3F8R)

(-) Exons   (0, 0)

(no "Exon" information available for 3F8R)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:308
 aligned with Q8X236_SULSF | Q8X236 from UniProtKB/TrEMBL  Length:324

    Alignment length:311
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319 
         Q8X236_SULSF    10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKGQQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 320
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------3f8rA02 A:126-248  [code=3.50.50.60, no name defined]                                                                       ----------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeee..hhhhhhhhhhhhhh...eeeee...hhhhhhh.ee........eehhhhhhhhhhhhhh....eee..eeeee..--.eeeee....eeeeeeeee....ee...............ee.hhhhhhhhhh..eeeee..hhhhhhhhhhhhhhh.eeeee.......-.hhhhhhhhhh...eeee..eeeeeeee...eeeeeeee.....eeeee..eeee...ee.hhhhhhhh......................eee............hhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3f8r A  10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENR--EFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK-AQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
                                    19        29        39        49        59        69        79        89        |- |     109       119       129       139       149       159       169       179       189| |    198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                                                                                   98  |                                                                                      190 |                                                                                                                                
                                                                                                                     101                                                                                        191                                                                                                                                


Chain A from PDB  Type:PROTEIN  Length:308
 aligned with Q97W27_SULSO | Q97W27 from UniProtKB/TrEMBL  Length:323

    Alignment length:310
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319
         Q97W27_SULSO    10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------3f8rA02 A:126-248  [code=3.50.50.60, no name defined]                                                                      ----------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeee..hhhhhhhhhhhhhh...eeeee...hhhhhhh.ee........eehhhhhhhhhhhhhh....eee..eeeee..--.eeeee....eeeeeeeee....ee...............ee.hhhhhhhhhh..eeeee..hhhhhhhhhhhhhhh.eeeee........hhhhhhhhhh...eeee..eeeeeeee...eeeeeeee.....eeeee..eeee...ee.hhhhhhhh......................eee............hhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3f8r A  10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENR--EFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
                                    19        29        39        49        59        69        79        89        |- |     109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319
                                                                                                                   98  |                                                                                                                                                                                                                          
                                                                                                                     101                                                                                                                                                                                                                          


Chain B from PDB  Type:PROTEIN  Length:309
 aligned with Q8X236_SULSF | Q8X236 from UniProtKB/TrEMBL  Length:324

    Alignment length:311
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319 
         Q8X236_SULSF    10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKGQQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 320
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------3f8rB02 B:126-248  [code=3.50.50.60, no name defined]                                                                       ----------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeee..hhhhhhhhhhhhhh...eeeee...hhhhhhh.ee........eehhhhhhhhhhhhhhh...eee..eeeee..-..eeeee....eeeeeeeee....ee...............ee.hhhhhhhhhh..eeeee..hhhhhhhhhhhhh...eeeee.......-.hhhhhhhhhh...eeee..eeeeeeee...eeeeeeee.....eeeee..eeee...ee.hhhhhhhh......................eee.hhhh.......hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3f8r B  10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENR-DEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK-AQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
                                    19        29        39        49        59        69        79        89        |-|      109       119       129       139       149       159       169       179       189| |    198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                                                                                   98 |                                                                                       190 |                                                                                                                                
                                                                                                                    100                                                                                         191                                                                                                                                


Chain B from PDB  Type:PROTEIN  Length:309
 aligned with Q97W27_SULSO | Q97W27 from UniProtKB/TrEMBL  Length:323

    Alignment length:310
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319
         Q97W27_SULSO    10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------3f8rB02 B:126-248  [code=3.50.50.60, no name defined]                                                                      ----------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeee..hhhhhhhhhhhhhh...eeeee...hhhhhhh.ee........eehhhhhhhhhhhhhhh...eee..eeeee..-..eeeee....eeeeeeeee....ee...............ee.hhhhhhhhhh..eeeee..hhhhhhhhhhhhh...eeeee........hhhhhhhhhh...eeee..eeeeeeee...eeeeeeee.....eeeee..eeee...ee.hhhhhhhh......................eee.hhhh.......hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3f8r B  10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENR-DEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
                                    19        29        39        49        59        69        79        89        |-|      109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319
                                                                                                                   98 |                                                                                                                                                                                                                           
                                                                                                                    100                                                                                                                                                                                                                           


Chain C from PDB  Type:PROTEIN  Length:307
 aligned with Q8X236_SULSF | Q8X236 from UniProtKB/TrEMBL  Length:324

    Alignment length:311
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319 
         Q8X236_SULSF    10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKGQQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 320
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------3f8rC02 C:126-248  [code=3.50.50.60, no name defined]                                                                       ----------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeee..hhhhhhhhhhhhhh...eeee....hhhhhhh.ee........eehhhhhhhhhhhhhhh...ee...eeeee.---.eeeee....eeeeeeeee....ee...............ee.hhhhhhhhhh..eeeee..hhhhhhhhhhhhhhh.eeeee.......-.hhhhhhhhhh...eeee..eeeeeeee...eeeeeeee.......eee..eeee...ee.hhhhhhhh......................eee............hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3f8r C  10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIEN---EFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK-AQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
                                    19        29        39        49        59        69        79        89       | - |     109       119       129       139       149       159       169       179       189| |    198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                                                                                  97 101                                                                                      190 |                                                                                                                                
                                                                                                                                                                                                                191                                                                                                                                


Chain C from PDB  Type:PROTEIN  Length:307
 aligned with Q97W27_SULSO | Q97W27 from UniProtKB/TrEMBL  Length:323

    Alignment length:310
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319
         Q97W27_SULSO    10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------3f8rC02 C:126-248  [code=3.50.50.60, no name defined]                                                                      ----------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeee..hhhhhhhhhhhhhh...eeee....hhhhhhh.ee........eehhhhhhhhhhhhhhh...ee...eeeee.---.eeeee....eeeeeeeee....ee...............ee.hhhhhhhhhh..eeeee..hhhhhhhhhhhhhhh.eeeee........hhhhhhhhhh...eeee..eeeeeeee...eeeeeeee.......eee..eeee...ee.hhhhhhhh......................eee............hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3f8r C  10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIEN---EFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319
                                    19        29        39        49        59        69        79        89       | - |     109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319
                                                                                                                  97 101                                                                                                                                                                                                                          


Chain D from PDB  Type:PROTEIN  Length:298
 aligned with Q8X236_SULSF | Q8X236 from UniProtKB/TrEMBL  Length:324

    Alignment length:307
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       
         Q8X236_SULSF    13 GEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKGQQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTE 319
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -----------------------------------------------------------------------------------------------------------------3f8rD02 D:126-248  [code=3.50.50.60, no name defined]                                                                       ---------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee..hhhhhhhhhhhhhh...eeee....hhhhhhh.ee........eehhhhhhhhhhhhhh....ee...eeeeee....eeeee....eeeeeeeee....ee...............ee.hhhhhhhhhh..eeeee..hhhhhhhhhhhh....eeeeee......-.hhhhhhhhhh...eeeee.eeeeeeee...eeeeeeee..--------..eeee...ee.hhhhhhhh......................eee............hhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3f8r D  13 GEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK-AQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLK--------VNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTE 318
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       191       201       211       221       231       241       251       261       271       281       291       301       311       
                                                                                                                                                                                                           190 |                                     231      240                                                                              
                                                                                                                                                                                                             191                                                                                                                               


Chain D from PDB  Type:PROTEIN  Length:298
 aligned with Q97W27_SULSO | Q97W27 from UniProtKB/TrEMBL  Length:323

    Alignment length:306
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312      
         Q97W27_SULSO    13 GEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTE 318
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains -----------------------------------------------------------------------------------------------------------------3f8rD02 D:126-248  [code=3.50.50.60, no name defined]                                                                      ---------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeee..hhhhhhhhhhhhhh...eeee....hhhhhhh.ee........eehhhhhhhhhhhhhh....ee...eeeeee....eeeee....eeeeeeeee....ee...............ee.hhhhhhhhhh..eeeee..hhhhhhhhhhhh....eeeeee.......hhhhhhhhhh...eeeee.eeeeeeee...eeeeeeee..--------..eeee...ee.hhhhhhhh......................eee............hhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3f8r D  13 GEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLK--------VNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTE 318
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222        |-       242       252       262       272       282       292       302       312      
                                                                                                                                                                                                                                                    231      240
   Legend:   → Mismatch (orange background)
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3F8R)

(-) CATH Domains  (1, 4)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3F8R)

(-) Gene Ontology  (7, 12)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (Q97W27_SULSO | Q97W27)
molecular function
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0004791    thioredoxin-disulfide reductase activity    Catalysis of the reaction: NADP(+) + thioredoxin = H(+) + NADPH + thioredoxin disulfide.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0019430    removal of superoxide radicals    Any process, acting at the cellular level, involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2).
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Chain A,B,C,D   (Q8X236_SULSF | Q8X236)
molecular function
    GO:0003954    NADH dehydrogenase activity    Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0004791    thioredoxin-disulfide reductase activity    Catalysis of the reaction: NADP(+) + thioredoxin = H(+) + NADPH + thioredoxin disulfide.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0019430    removal of superoxide radicals    Any process, acting at the cellular level, involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2).
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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  Q97W27_SULSO | Q97W27
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        Q97W27_SULSO | Q97W27: 3f8d 3f8p
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(-) Related Entries Specified in the PDB File

3f8d C147A MUTANT
3f8p WILD-TYPE STRUCTURE IN COMPLEX WITH NAD