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(-) Description

Title :  PUTATIVE 5-CARBOXYMETHYL-2-HYDROXYMUCONATE ISOMERASE FROM PSEUDOMONAS AERUGINOSA.
 
Authors :  J. Osipiuk, X. Xu, H. Cui, A. Savchenko, A. M. Edwards, A. Joachimiak, Mi Center For Structural Genomics (Mcsg)
Date :  15 Aug 08  (Deposition) - 26 Aug 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.75
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,B,C  (1x)
Biol. Unit 2:  D,E,F  (1x)
Biol. Unit 3:  G,H,I  (1x)
Biol. Unit 4:  J,K,L  (1x)
Keywords :  Structural Genomics, Apc7683, Isomerase, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Osipiuk, X. Xu, H. Cui, A. Savchenko, A. M. Edwards, A. Joachimiak
X-Ray Crystal Structure Of Putative 5-Carboxymethyl-2-Hydroxymuconate Isomerase From Pseudomona Aeruginosa.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE 5-CARBOXYMETHYL-2-HYDROXYMUCONATE ISOMERASE
    Chains: A, B, C, D, E, F, G, H, I, J, K, L
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15B MODIFIED
    Expression System Strain: BL21(DE3)
    Expression System Vector Type: PLASMID
    Gene: PA1966
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 287
    Strain: PAO1

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFGHIJKL
Biological Unit 1 (1x): ABC         
Biological Unit 2 (1x):    DEF      
Biological Unit 3 (1x):       GHI   
Biological Unit 4 (1x):          JKL

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (7, 71)

Asymmetric Unit (7, 71)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2EDO17Ligand/Ion1,2-ETHANEDIOL
3FMT15Ligand/IonFORMIC ACID
4GOL7Ligand/IonGLYCEROL
5IMD2Ligand/IonIMIDAZOLE
6MSE24Mod. Amino AcidSELENOMETHIONINE
7NA4Ligand/IonSODIUM ION
Biological Unit 1 (5, 17)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2EDO3Ligand/Ion1,2-ETHANEDIOL
3FMT5Ligand/IonFORMIC ACID
4GOL2Ligand/IonGLYCEROL
5IMD-1Ligand/IonIMIDAZOLE
6MSE6Mod. Amino AcidSELENOMETHIONINE
7NA-1Ligand/IonSODIUM ION
Biological Unit 2 (5, 14)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2EDO3Ligand/Ion1,2-ETHANEDIOL
3FMT2Ligand/IonFORMIC ACID
4GOL2Ligand/IonGLYCEROL
5IMD-1Ligand/IonIMIDAZOLE
6MSE6Mod. Amino AcidSELENOMETHIONINE
7NA-1Ligand/IonSODIUM ION
Biological Unit 3 (4, 19)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
2EDO6Ligand/Ion1,2-ETHANEDIOL
3FMT5Ligand/IonFORMIC ACID
4GOL2Ligand/IonGLYCEROL
5IMD-1Ligand/IonIMIDAZOLE
6MSE6Mod. Amino AcidSELENOMETHIONINE
7NA-1Ligand/IonSODIUM ION
Biological Unit 4 (5, 17)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
2EDO5Ligand/Ion1,2-ETHANEDIOL
3FMT3Ligand/IonFORMIC ACID
4GOL1Ligand/IonGLYCEROL
5IMD2Ligand/IonIMIDAZOLE
6MSE6Mod. Amino AcidSELENOMETHIONINE
7NA-1Ligand/IonSODIUM ION

(-) Sites  (47, 47)

Asymmetric Unit (47, 47)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLN A:101 , HOH A:389 , VAL B:118 , HOH B:489BINDING SITE FOR RESIDUE EDO A 310
02AC2SOFTWAREARG A:51 , HOH A:365 , GLU B:23 , GLU F:48BINDING SITE FOR RESIDUE FMT A 325
03AC3SOFTWAREARG A:111 , HOH A:355 , HOH A:375 , HOH A:431BINDING SITE FOR RESIDUE FMT A 333
04AC4SOFTWAREHIS A:63 , CYS A:65 , GLU A:105 , FMT B:345 , HOH B:477BINDING SITE FOR RESIDUE FMT A 335
05AC5SOFTWAREALA A:8 , THR A:9 , ALA A:10 , LEU A:12 , THR A:46 , HOH A:418BINDING SITE FOR RESIDUE ACT A 337
06AC6SOFTWAREVAL A:5 , GLU A:7 , HIS A:63 , CYS A:65 , HOH B:383BINDING SITE FOR RESIDUE NA A 343
07AC7SOFTWAREARG A:107 , ARG B:107 , HOH B:373 , ARG C:107BINDING SITE FOR RESIDUE GOL B 304
08AC8SOFTWAREGLU A:48 , PHE B:44 , VAL B:45 , THR B:46 , HOH B:361 , HOH B:374 , HOH B:381BINDING SITE FOR RESIDUE EDO B 309
09AC9SOFTWAREARG B:111 , HOH B:430 , HOH B:452 , HOH K:464BINDING SITE FOR RESIDUE FMT B 332
10BC1SOFTWAREGLU B:7 , HOH B:494BINDING SITE FOR RESIDUE NA B 344
11BC2SOFTWAREFMT A:335 , HIS B:3 , VAL B:5 , SER B:67 , HOH B:346 , HOH B:402 , HOH B:477BINDING SITE FOR RESIDUE FMT B 345
12BC3SOFTWAREARG A:107 , GLU A:108 , HOH A:405 , ARG B:107 , GLU B:108 , HOH B:470 , ARG C:107 , GLU C:108 , HOH C:327 , HOH C:336 , HOH C:342 , HOH C:429 , HOH C:457BINDING SITE FOR RESIDUE GOL C 303
13BC4SOFTWAREHIS A:3 , SER A:67 , HOH A:345 , HIS C:63 , CYS C:65 , GLU C:105 , HOH C:358BINDING SITE FOR RESIDUE EDO C 318
14BC5SOFTWAREHIS D:63 , CYS D:65 , GLU D:105 , HOH D:344 , HIS E:3 , ARG E:107 , HOH E:418BINDING SITE FOR RESIDUE EDO D 313
15BC6SOFTWAREARG D:107 , GLU D:108 , ARG E:107 , GLU E:108 , HOH E:421 , HOH E:422 , HOH E:437 , HOH E:497 , HOH E:541 , ARG F:107 , GLU F:108BINDING SITE FOR RESIDUE GOL E 301
16BC7SOFTWAREGLU A:48 , HOH A:415 , GLU E:48 , ALA E:49 , TYR E:50 , ARG E:51 , HOH E:427 , HOH E:534BINDING SITE FOR RESIDUE GOL E 306
17BC8SOFTWAREHIS E:63 , CYS E:65 , GLU E:105 , HOH E:475 , HIS F:3 , ARG F:43 , SER F:67 , ARG F:107BINDING SITE FOR RESIDUE EDO E 322
18BC9SOFTWAREARG D:107 , ARG E:107 , ARG F:107BINDING SITE FOR RESIDUE ACT E 338
19CC1SOFTWAREHIS D:3 , HOH D:322 , HIS F:63 , CYS F:65 , GLU F:105 , HOH F:498BINDING SITE FOR RESIDUE EDO F 312
20CC2SOFTWARETHR F:9 , LEU F:12 , HOH F:439BINDING SITE FOR RESIDUE FMT F 324
21CC3SOFTWAREASP F:39 , GLN G:34 , HOH G:494BINDING SITE FOR RESIDUE FMT F 326
22CC4SOFTWAREHOH E:464 , VAL F:5 , GLU F:7 , HIS F:63 , CYS F:65BINDING SITE FOR RESIDUE NA F 342
23CC5SOFTWAREHIS G:63 , CYS G:65 , GLU G:105 , HOH G:582 , HIS H:3 , HOH H:341BINDING SITE FOR RESIDUE EDO G 319
24CC6SOFTWAREGLU G:7BINDING SITE FOR RESIDUE NA G 341
25CC7SOFTWAREARG G:107 , ARG H:107 , HOH H:406 , HOH H:411 , ARG I:107BINDING SITE FOR RESIDUE GOL H 302
26CC8SOFTWAREARG G:107 , ARG H:107 , GLU H:108 , HOH H:357 , HOH H:367 , HOH H:368 , HOH H:473 , ARG I:107 , GLU I:108BINDING SITE FOR RESIDUE GOL H 305
27CC9SOFTWAREHIS H:63 , CYS H:65 , GLU H:105 , HOH H:382BINDING SITE FOR RESIDUE EDO H 311
28DC1SOFTWARETYR H:50 , ARG H:51 , HOH H:342 , HOH H:471 , GLY I:19 , LEU I:22 , HOH I:365BINDING SITE FOR RESIDUE EDO H 321
29DC2SOFTWAREARG H:13 , ALA H:93 , HOH H:460 , SER K:17BINDING SITE FOR RESIDUE FMT H 327
30DC3SOFTWAREHOH H:470BINDING SITE FOR RESIDUE FMT H 328
31DC4SOFTWAREALA H:8 , THR H:9 , LEU H:12 , THR H:46 , HOH H:385BINDING SITE FOR RESIDUE FMT H 334
32DC5SOFTWAREGLU H:48 , PHE I:44 , VAL I:45 , THR I:46 , HOH I:342 , HOH I:391 , HOH I:403BINDING SITE FOR RESIDUE EDO I 314
33DC6SOFTWAREARG H:51 , GLU I:20 , GLU I:23 , HOH I:340 , HOH I:365 , HOH I:383 , GLU L:48BINDING SITE FOR RESIDUE EDO I 315
34DC7SOFTWAREHIS G:3 , ARG G:43 , HIS I:63 , CYS I:65 , GLU I:105 , HOH I:478BINDING SITE FOR RESIDUE EDO I 317
35DC8SOFTWAREGLU I:7 , HOH I:434BINDING SITE FOR RESIDUE FMT I 329
36DC9SOFTWAREGLU I:48 , ALA I:49 , TYR I:50 , ARG I:51 , HOH I:400 , HOH I:508BINDING SITE FOR RESIDUE FMT I 330
37EC1SOFTWAREARG J:107 , GLU J:108 , HOH J:356 , HOH J:360 , HOH J:374 , HOH J:416 , HOH J:458 , HOH J:478 , ARG K:107 , ARG L:107 , GLU L:108BINDING SITE FOR RESIDUE GOL J 307
38EC2SOFTWAREHIS J:63 , CYS J:65 , GLU J:105 , HOH J:382 , ARG K:43 , SER K:67BINDING SITE FOR RESIDUE EDO J 316
39EC3SOFTWAREARG J:107 , ARG K:107 , ARG L:107BINDING SITE FOR RESIDUE IMD J 340
40EC4SOFTWAREGLU H:48 , GLU K:48 , ALA K:49 , TYR K:50 , ARG K:51BINDING SITE FOR RESIDUE EDO K 308
41EC5SOFTWAREGLU K:7 , HIS K:63 , CYS K:65 , GLU K:105 , EDO K:324 , HOH K:454 , HOH K:485 , VAL L:5 , HOH L:394BINDING SITE FOR RESIDUE EDO K 323
42EC6SOFTWAREHIS K:63 , CYS K:65 , GLU K:105 , EDO K:323 , HIS L:3 , SER L:67 , ARG L:107 , MSE L:109BINDING SITE FOR RESIDUE EDO K 324
43EC7SOFTWAREGLN A:34 , HOH A:373 , PHE L:-2 , GLY L:36 , ASP L:39BINDING SITE FOR RESIDUE EDO L 320
44EC8SOFTWARELEU L:-4BINDING SITE FOR RESIDUE FMT L 331
45EC9SOFTWAREASP L:73 , FMT L:340 , HOH L:502 , HOH L:510BINDING SITE FOR RESIDUE FMT L 336
46FC1SOFTWARESER I:17 , ALA L:8 , THR L:9 , ALA L:10 , LEU L:12 , LEU L:14 , PHE L:44 , THR L:46 , HOH L:448BINDING SITE FOR RESIDUE IMD L 339
47FC2SOFTWAREARG L:72 , ASP L:73 , THR L:76 , FMT L:336BINDING SITE FOR RESIDUE FMT L 340

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3E6Q)

(-) Cis Peptide Bonds  (12, 12)

Asymmetric Unit
No.Residues
1Mse A:1 -Pro A:2
2Mse B:1 -Pro B:2
3Mse C:1 -Pro C:2
4Mse D:1 -Pro D:2
5Mse E:1 -Pro E:2
6Mse F:1 -Pro F:2
7Mse G:1 -Pro G:2
8Mse H:1 -Pro H:2
9Mse I:1 -Pro I:2
10Mse J:1 -Pro J:2
11Mse K:1 -Pro K:2
12Mse L:1 -Pro L:2

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3E6Q)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3E6Q)

(-) Exons   (0, 0)

(no "Exon" information available for 3E6Q)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:126
 aligned with Q9I2D8_PSEAE | Q9I2D8 from UniProtKB/TrEMBL  Length:123

    Alignment length:126
                                 1                                                                                                                        
                                 |   5        15        25        35        45        55        65        75        85        95       105       115      
         Q9I2D8_PSEAE     - -----MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREMERASYAKRVVAR 121
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 3e6qA00 A:-4-121 Macrophage Migration Inhibitory Factor                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......eeeeeee...ee..hhhhhhhhhhhhhhhh...hhhh.eeeeeee..eee........eeeeeeeee...hhhhhhhhhhhhhhhhhhheee.....eeeeeeeeeehhhhheeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3e6q A  -4 LYFQGmPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREmERASYAKRVVAR 121
                                 |   5        15        25        35        45        55        65        75        85        95       105   |   115      
                                 1-MSE                                                                                                     109-MSE        


Chain B from PDB  Type:PROTEIN  Length:126
 aligned with Q9I2D8_PSEAE | Q9I2D8 from UniProtKB/TrEMBL  Length:123

    Alignment length:126
                                 1                                                                                                                        
                                 |   5        15        25        35        45        55        65        75        85        95       105       115      
         Q9I2D8_PSEAE     - -----MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREMERASYAKRVVAR 121
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 3e6qB00 B:-4-121 Macrophage Migration Inhibitory Factor                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......eeeeeee...ee..hhhhhhhhhhhhhhhh...hhhh.eeeeeee..eee........eeeeeeeee...hhhhhhhhhhhhhhhhhhheee.....eeeeeeeeeehhhhheeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3e6q B  -4 LYFQGmPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREmERASYAKRVVAR 121
                                 |   5        15        25        35        45        55        65        75        85        95       105   |   115      
                                 1-MSE                                                                                                     109-MSE        


Chain C from PDB  Type:PROTEIN  Length:126
 aligned with Q9I2D8_PSEAE | Q9I2D8 from UniProtKB/TrEMBL  Length:123

    Alignment length:126
                                 1                                                                                                                        
                                 |   5        15        25        35        45        55        65        75        85        95       105       115      
         Q9I2D8_PSEAE     - -----MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREMERASYAKRVVAR 121
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 3e6qC00 C:-4-121 Macrophage Migration Inhibitory Factor                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......eeeeeee...ee..hhhhhhhhhhhhhhhh...hhhh.eeeeeee.eeee........eeeeeeeee...hhhhhhhhhhhhhhhhhhheee.....eeeeeeeeeehhhhheeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3e6q C  -4 LYFQGmPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREmERASYAKRVVAR 121
                                 |   5        15        25        35        45        55        65        75        85        95       105   |   115      
                                 1-MSE                                                                                                     109-MSE        


Chain D from PDB  Type:PROTEIN  Length:128
 aligned with Q9I2D8_PSEAE | Q9I2D8 from UniProtKB/TrEMBL  Length:123

    Alignment length:128
                                  1                                                                                                                         
                                  |  4        14        24        34        44        54        64        74        84        94       104       114        
         Q9I2D8_PSEAE     - ------MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREMERASYAKRVVARQ 122
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3e6qD00 D:-5-122 Macrophage Migration Inhibitory Factor                                                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeeee...ee..hhhhhhhhhhhhhhhh...hhhh.eeeeeee..eee........eeeeeeeee...hhhhhhhhhhhhhhhhhhheee.....eeeeeeeeeehhhhheeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e6q D  -5 NLYFQGmPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREmERASYAKRVVARQ 122
                                  |  4        14        24        34        44        54        64        74        84        94       104    |  114        
                                  1-MSE                                                                                                     109-MSE         


Chain E from PDB  Type:PROTEIN  Length:127
 aligned with Q9I2D8_PSEAE | Q9I2D8 from UniProtKB/TrEMBL  Length:123

    Alignment length:127
                                  1                                                                                                                        
                                  |  4        14        24        34        44        54        64        74        84        94       104       114       
         Q9I2D8_PSEAE     - ------MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREMERASYAKRVVAR 121
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3e6qE00 E:-5-121 Macrophage Migration Inhibitory Factor                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeeee...ee..hhhhhhhhhhhhhhhh...hhhh.eeeeeee..eee........eeeeeeeee...hhhhhhhhhhhhhhhhhhheee.....eeeeeeeeeehhhhheeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e6q E  -5 NLYFQGmPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREmERASYAKRVVAR 121
                                  |  4        14        24        34        44        54        64        74        84        94       104    |  114       
                                  1-MSE                                                                                                     109-MSE        


Chain F from PDB  Type:PROTEIN  Length:128
 aligned with Q9I2D8_PSEAE | Q9I2D8 from UniProtKB/TrEMBL  Length:123

    Alignment length:128
                                   1                                                                                                                        
                                   | 3        13        23        33        43        53        63        73        83        93       103       113        
         Q9I2D8_PSEAE     - -------MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREMERASYAKRVVAR 121
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3e6qF00 F:-6-121 Macrophage Migration Inhibitory Factor                                                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eeeeeee...ee..hhhhhhhhhhhhhhhh...hhhh.eeeeeee..eee........eeeeeeeee...hhhhhhhhhhhhhhhhhhheee.....eeeeeeeeeehhhhheeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e6q F  -6 ENLYFQGmPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREmERASYAKRVVAR 121
                                   | 3        13        23        33        43        53        63        73        83        93       103     | 113        
                                   1-MSE                                                                                                     109-MSE        


Chain G from PDB  Type:PROTEIN  Length:126
 aligned with Q9I2D8_PSEAE | Q9I2D8 from UniProtKB/TrEMBL  Length:123

    Alignment length:126
                                 1                                                                                                                        
                                 |   5        15        25        35        45        55        65        75        85        95       105       115      
         Q9I2D8_PSEAE     - -----MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREMERASYAKRVVAR 121
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 3e6qG00 G:-4-121 Macrophage Migration Inhibitory Factor                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......eeeeeee...ee..hhhhhhhhhhhhhhhh...hhhh.eeeeeee..eee........eeeeeeeee...hhhhhhhhhhhhhhhhhhheee.....eeeeeeeeeehhhhheeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3e6q G  -4 LYFQGmPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREmERASYAKRVVAR 121
                                 |   5        15        25        35        45        55        65        75        85        95       105   |   115      
                                 1-MSE                                                                                                     109-MSE        


Chain H from PDB  Type:PROTEIN  Length:126
 aligned with Q9I2D8_PSEAE | Q9I2D8 from UniProtKB/TrEMBL  Length:123

    Alignment length:126
                                 1                                                                                                                        
                                 |   5        15        25        35        45        55        65        75        85        95       105       115      
         Q9I2D8_PSEAE     - -----MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREMERASYAKRVVAR 121
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 3e6qH00 H:-4-121 Macrophage Migration Inhibitory Factor                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......eeeeeee...ee..hhhhhhhhhhhhhhhh...hhhh.eeeeeee..eee........eeeeeeeee...hhhhhhhhhhhhhhhhhhheee.....eeeeeeeeeehhhhheeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3e6q H  -4 LYFQGmPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREmERASYAKRVVAR 121
                                 |   5        15        25        35        45        55        65        75        85        95       105   |   115      
                                 1-MSE                                                                                                     109-MSE        


Chain I from PDB  Type:PROTEIN  Length:126
 aligned with Q9I2D8_PSEAE | Q9I2D8 from UniProtKB/TrEMBL  Length:123

    Alignment length:126
                                 1                                                                                                                        
                                 |   5        15        25        35        45        55        65        75        85        95       105       115      
         Q9I2D8_PSEAE     - -----MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREMERASYAKRVVAR 121
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 3e6qI00 I:-4-121 Macrophage Migration Inhibitory Factor                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......eeeeeee...ee..hhhhhhhhhhhhhhhh...hhhh.eeeeeee..eee........eeeeeeeee...hhhhhhhhhhhhhhhhhhheee.....eeeeeeeeeehhhhheeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3e6q I  -4 LYFQGmPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREmERASYAKRVVAR 121
                                 |   5        15        25        35        45        55        65        75        85        95       105   |   115      
                                 1-MSE                                                                                                     109-MSE        


Chain J from PDB  Type:PROTEIN  Length:127
 aligned with Q9I2D8_PSEAE | Q9I2D8 from UniProtKB/TrEMBL  Length:123

    Alignment length:127
                                  1                                                                                                                        
                                  |  4        14        24        34        44        54        64        74        84        94       104       114       
         Q9I2D8_PSEAE     - ------MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREMERASYAKRVVAR 121
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3e6qJ00 J:-5-121 Macrophage Migration Inhibitory Factor                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeeee...ee..hhhhhhhhhhhhhhhh...hhhh.eeeeeee..eee........eeeeeeeee...hhhhhhhhhhhhhhhhhhheee.....eeeeeeeeeehhhhheeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e6q J  -5 NLYFQGmPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREmERASYAKRVVAR 121
                                  |  4        14        24        34        44        54        64        74        84        94       104    |  114       
                                  1-MSE                                                                                                     109-MSE        


Chain K from PDB  Type:PROTEIN  Length:127
 aligned with Q9I2D8_PSEAE | Q9I2D8 from UniProtKB/TrEMBL  Length:123

    Alignment length:127
                                  1                                                                                                                        
                                  |  4        14        24        34        44        54        64        74        84        94       104       114       
         Q9I2D8_PSEAE     - ------MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREMERASYAKRVVAR 121
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3e6qK00 K:-5-121 Macrophage Migration Inhibitory Factor                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeeee...ee..hhhhhhhhhhhhhhhh...hhhh.eeeeeee..eee........eeeeeeeee...hhhhhhhhhhhhhhhhhhheee.....eeeeeeeeeehhhhheeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e6q K  -5 NLYFQGmPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREmERASYAKRVVAR 121
                                  |  4        14        24        34        44        54        64        74        84        94       104    |  114       
                                  1-MSE                                                                                                     109-MSE        


Chain L from PDB  Type:PROTEIN  Length:127
 aligned with Q9I2D8_PSEAE | Q9I2D8 from UniProtKB/TrEMBL  Length:123

    Alignment length:127
                                  1                                                                                                                        
                                  |  4        14        24        34        44        54        64        74        84        94       104       114       
         Q9I2D8_PSEAE     - ------MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREMERASYAKRVVAR 121
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3e6qL00 L:-5-121 Macrophage Migration Inhibitory Factor                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeeee...ee..hhhhhhhhhhhhhhhh...hhhh.eeeeeee..eee........eeeeeeeee...hhhhhhhhhhhhhhhhhhheee.....eeeeeeeeeehhhhheeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e6q L  -5 NLYFQGmPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREmERASYAKRVVAR 121
                                  |  4        14        24        34        44        54        64        74        84        94       104    |  114       
                                  1-MSE                                                                                                     109-MSE
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3E6Q)

(-) CATH Domains  (1, 12)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3E6Q)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L   (Q9I2D8_PSEAE | Q9I2D8)
molecular function
    GO:0008704    5-carboxymethyl-2-hydroxymuconate delta-isomerase activity    Catalysis of the reaction: 5-carboxymethyl-2-hydroxymuconate = 5-carboxy-2-oxohept-3-enedioate.
biological process
    GO:0019439    aromatic compound catabolic process    The chemical reactions and pathways resulting in the breakdown of aromatic compounds, any substance containing an aromatic carbon ring.

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  3e6q
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9I2D8_PSEAE | Q9I2D8: 4nwp 4nwq

(-) Related Entries Specified in the PDB File

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