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3E6Q
Biol. Unit 1
Info
Asym.Unit (313 KB)
Biol.Unit 1 (79 KB)
Biol.Unit 2 (77 KB)
Biol.Unit 3 (77 KB)
Biol.Unit 4 (78 KB)
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(1)
Title
:
PUTATIVE 5-CARBOXYMETHYL-2-HYDROXYMUCONATE ISOMERASE FROM PSEUDOMONAS AERUGINOSA.
Authors
:
J. Osipiuk, X. Xu, H. Cui, A. Savchenko, A. M. Edwards, A. Joachimiak, Mi Center For Structural Genomics (Mcsg)
Date
:
15 Aug 08 (Deposition) - 26 Aug 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.75
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C (1x)
Biol. Unit 2: D,E,F (1x)
Biol. Unit 3: G,H,I (1x)
Biol. Unit 4: J,K,L (1x)
Keywords
:
Structural Genomics, Apc7683, Isomerase, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Osipiuk, X. Xu, H. Cui, A. Savchenko, A. M. Edwards, A. Joachimiak
X-Ray Crystal Structure Of Putative 5-Carboxymethyl-2-Hydroxymuconate Isomerase From Pseudomona Aeruginosa.
To Be Published
[
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Hetero Components
(5, 17)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
2l: 1,2-ETHANEDIOL (EDOl)
2m: 1,2-ETHANEDIOL (EDOm)
2n: 1,2-ETHANEDIOL (EDOn)
2o: 1,2-ETHANEDIOL (EDOo)
2p: 1,2-ETHANEDIOL (EDOp)
2q: 1,2-ETHANEDIOL (EDOq)
3a: FORMIC ACID (FMTa)
3b: FORMIC ACID (FMTb)
3c: FORMIC ACID (FMTc)
3d: FORMIC ACID (FMTd)
3e: FORMIC ACID (FMTe)
3f: FORMIC ACID (FMTf)
3g: FORMIC ACID (FMTg)
3h: FORMIC ACID (FMTh)
3i: FORMIC ACID (FMTi)
3j: FORMIC ACID (FMTj)
3k: FORMIC ACID (FMTk)
3l: FORMIC ACID (FMTl)
3m: FORMIC ACID (FMTm)
3n: FORMIC ACID (FMTn)
3o: FORMIC ACID (FMTo)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
4d: GLYCEROL (GOLd)
4e: GLYCEROL (GOLe)
4f: GLYCEROL (GOLf)
4g: GLYCEROL (GOLg)
5a: IMIDAZOLE (IMDa)
5b: IMIDAZOLE (IMDb)
6a: SELENOMETHIONINE (MSEa)
6b: SELENOMETHIONINE (MSEb)
6c: SELENOMETHIONINE (MSEc)
6d: SELENOMETHIONINE (MSEd)
6e: SELENOMETHIONINE (MSEe)
6f: SELENOMETHIONINE (MSEf)
6g: SELENOMETHIONINE (MSEg)
6h: SELENOMETHIONINE (MSEh)
6i: SELENOMETHIONINE (MSEi)
6j: SELENOMETHIONINE (MSEj)
6k: SELENOMETHIONINE (MSEk)
6l: SELENOMETHIONINE (MSEl)
6m: SELENOMETHIONINE (MSEm)
6n: SELENOMETHIONINE (MSEn)
6o: SELENOMETHIONINE (MSEo)
6p: SELENOMETHIONINE (MSEp)
6q: SELENOMETHIONINE (MSEq)
6r: SELENOMETHIONINE (MSEr)
6s: SELENOMETHIONINE (MSEs)
6t: SELENOMETHIONINE (MSEt)
6u: SELENOMETHIONINE (MSEu)
6v: SELENOMETHIONINE (MSEv)
6w: SELENOMETHIONINE (MSEw)
6x: SELENOMETHIONINE (MSEx)
7a: SODIUM ION (NAa)
7b: SODIUM ION (NAb)
7c: SODIUM ION (NAc)
7d: SODIUM ION (NAd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
EDO
3
Ligand/Ion
1,2-ETHANEDIOL
3
FMT
5
Ligand/Ion
FORMIC ACID
4
GOL
2
Ligand/Ion
GLYCEROL
5
IMD
-1
Ligand/Ion
IMIDAZOLE
6
MSE
6
Mod. Amino Acid
SELENOMETHIONINE
7
NA
-1
Ligand/Ion
SODIUM ION
[
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]
Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC7 (SOFTWARE)
15: EC7 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN A:101 , HOH A:389 , VAL B:118 , HOH B:489
BINDING SITE FOR RESIDUE EDO A 310
02
AC2
SOFTWARE
ARG A:51 , HOH A:365 , GLU B:23 , GLU F:48
BINDING SITE FOR RESIDUE FMT A 325
03
AC3
SOFTWARE
ARG A:111 , HOH A:355 , HOH A:375 , HOH A:431
BINDING SITE FOR RESIDUE FMT A 333
04
AC4
SOFTWARE
HIS A:63 , CYS A:65 , GLU A:105 , FMT B:345 , HOH B:477
BINDING SITE FOR RESIDUE FMT A 335
05
AC5
SOFTWARE
ALA A:8 , THR A:9 , ALA A:10 , LEU A:12 , THR A:46 , HOH A:418
BINDING SITE FOR RESIDUE ACT A 337
06
AC6
SOFTWARE
VAL A:5 , GLU A:7 , HIS A:63 , CYS A:65 , HOH B:383
BINDING SITE FOR RESIDUE NA A 343
07
AC7
SOFTWARE
ARG A:107 , ARG B:107 , HOH B:373 , ARG C:107
BINDING SITE FOR RESIDUE GOL B 304
08
AC8
SOFTWARE
GLU A:48 , PHE B:44 , VAL B:45 , THR B:46 , HOH B:361 , HOH B:374 , HOH B:381
BINDING SITE FOR RESIDUE EDO B 309
09
AC9
SOFTWARE
ARG B:111 , HOH B:430 , HOH B:452 , HOH K:464
BINDING SITE FOR RESIDUE FMT B 332
10
BC1
SOFTWARE
GLU B:7 , HOH B:494
BINDING SITE FOR RESIDUE NA B 344
11
BC2
SOFTWARE
FMT A:335 , HIS B:3 , VAL B:5 , SER B:67 , HOH B:346 , HOH B:402 , HOH B:477
BINDING SITE FOR RESIDUE FMT B 345
12
BC3
SOFTWARE
ARG A:107 , GLU A:108 , HOH A:405 , ARG B:107 , GLU B:108 , HOH B:470 , ARG C:107 , GLU C:108 , HOH C:327 , HOH C:336 , HOH C:342 , HOH C:429 , HOH C:457
BINDING SITE FOR RESIDUE GOL C 303
13
BC4
SOFTWARE
HIS A:3 , SER A:67 , HOH A:345 , HIS C:63 , CYS C:65 , GLU C:105 , HOH C:358
BINDING SITE FOR RESIDUE EDO C 318
14
BC7
SOFTWARE
GLU A:48 , HOH A:415 , GLU E:48 , ALA E:49 , TYR E:50 , ARG E:51 , HOH E:427 , HOH E:534
BINDING SITE FOR RESIDUE GOL E 306
15
EC7
SOFTWARE
GLN A:34 , HOH A:373 , PHE L:-2 , GLY L:36 , ASP L:39
BINDING SITE FOR RESIDUE EDO L 320
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
Info
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
All SCOP Domains
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Sorry, no Info available
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CATH Domains
(1, 12)
Info
all CATH domains
1a: CATH_3e6qA00 (A:-4-121)
1b: CATH_3e6qB00 (B:-4-121)
1c: CATH_3e6qD00 (D:-5-122)
1d: CATH_3e6qF00 (F:-6-121)
1e: CATH_3e6qC00 (C:-4-121)
1f: CATH_3e6qG00 (G:-4-121)
1g: CATH_3e6qH00 (H:-4-121)
1h: CATH_3e6qI00 (I:-4-121)
1i: CATH_3e6qE00 (E:-5-121)
1j: CATH_3e6qJ00 (J:-5-121)
1k: CATH_3e6qK00 (K:-5-121)
1l: CATH_3e6qL00 (L:-5-121)
View:
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Classes
(
)
(
)
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(
)
(
)
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(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Macrophage Migration Inhibitory Factor
(40)
Homologous Superfamily
:
Macrophage Migration Inhibitory Factor
(40)
Pseudomonas aeruginosa. Organism_taxid: 287. Strain: pao1.
(1)
1a
3e6qA00
A:-4-121
1b
3e6qB00
B:-4-121
1c
3e6qD00
D:-5-122
1d
3e6qF00
F:-6-121
1e
3e6qC00
C:-4-121
1f
3e6qG00
G:-4-121
1g
3e6qH00
H:-4-121
1h
3e6qI00
I:-4-121
1i
3e6qE00
E:-5-121
1j
3e6qJ00
J:-5-121
1k
3e6qK00
K:-5-121
1l
3e6qL00
L:-5-121
[
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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