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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE UHM DOMAIN OF PUF60 FUSED TO THIOREDOXIN
Keywords SPLICING, FBP INTERACTING REPRESSOR, UHM, RRM, ELECTRON TRAN REDOX-ACTIVE CENTER, TRANSPORT, TRANSCRIPTION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3DXB     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   THIOREDOXIN N-TERMINALLY FUSED TO PUF60(UHM)  A 214 1655 0
2  Protein   THIOREDOXIN N-TERMINALLY FUSED TO PUF60(UHM)  B 211 1615 0
3  Protein   THIOREDOXIN N-TERMINALLY FUSED TO PUF60(UHM)  C 211 1630 0
4  Protein   THIOREDOXIN N-TERMINALLY FUSED TO PUF60(UHM)  D 216 1665 0
5  Protein   THIOREDOXIN N-TERMINALLY FUSED TO PUF60(UHM)  E 210 1622 0
6  Protein   THIOREDOXIN N-TERMINALLY FUSED TO PUF60(UHM)  F 211 1627 0
7  Protein   THIOREDOXIN N-TERMINALLY FUSED TO PUF60(UHM)  G 211 1630 0
8  Protein   THIOREDOXIN N-TERMINALLY FUSED TO PUF60(UHM)  H 211 1630 0
9  Ligand   THIOREDOXIN N-TERMINALLY FUSED TO PUF60(UHM)  A 1 0 1
10  Ligand   THIOREDOXIN N-TERMINALLY FUSED TO PUF60(UHM)  E 2 0 5
11  Ligand   THIOREDOXIN N-TERMINALLY FUSED TO PUF60(UHM)  F 1 0 1
12  Ligand   THIOREDOXIN N-TERMINALLY FUSED TO PUF60(UHM)  H 1 0 1
13 Water     1191 0 1191
total       2891 13074 1199

Proteins
Unit 1 PRO343 MET344 SER345 ASP346 LYS347 ILE348 ILE349 HIS350 LEU351 THR352 ASP353 ASP354 SER355 PHE356 ASP357 THR358 ASP359 VAL360 LEU361 LYS362 ALA363 ASP364 GLY365 ALA366 ILE367 LEU368 VAL369 ASP370 PHE371 TRP372 ALA373 GLU374 TRP375 CYS376 GLY377 PRO378 CYS379 LYS380 MET381 ILE382 ALA383 PRO384 ILE385 LEU386 ASP387 GLU388 ILE389 ALA390 ASP391 GLU392 TYR393 GLN394 GLY395 LYS396 LEU397 THR398 VAL399 ALA400 LYS401 LEU402 ASN403 ILE404 ASP405 GLN406 ASN407 PRO408 GLY409 THR410 ALA411 PRO412 LYS413 TYR414 GLY415 ILE416 ARG417 GLY418 ILE419 PRO420 THR421 LEU422 LEU423 LEU424 PHE425 LYS426 ASN427 GLY428 GLU429 VAL430 ALA431 ALA432 THR433 LYS434 VAL435 GLY436 ALA437 LEU438 SER439 LYS440 GLY441 GLN442 LEU443 LYS444 GLU445 PHE446 LEU447 ASP448 ALA449 ASN450 LEU451 ALA452 GLY453 SER454 ALA455 MET456 GLU457 SER458 THR459 VAL460 MET461 VAL462 LEU463 ARG464 ASN465 MET466 VAL467 ASP468 PRO469 LYS470 ASP471 ILE472 ASP473 ASP474 ASP475 LEU476 GLU477 GLY478 GLU479 VAL480 THR481 GLU482 GLU483 CYS484 GLY485 LYS486 PHE487 GLY488 ALA489 VAL490 ASN491 ARG492 VAL493 ILE494 ILE495 TYR496 GLN497 GLU498 LYS499 GLN500 GLY501 GLU502 GLU503 GLU504 ASP505 ALA506 GLU507 ILE508 ILE509 VAL510 LYS511 ILE512 PHE513 VAL514 GLU515 PHE516 SER517 ILE518 ALA519 SER520 GLU521 THR522 HIS523 LYS524 ALA525 ILE526 GLN527 ALA528 LEU529 ASN530 GLY531 ARG532 TRP533 PHE534 ALA535 GLY536 ARG537 LYS538 VAL539 VAL540 ALA541 GLU542 VAL543 TYR544 ASP545 GLN546 GLU547 ARG548 PHE549 ASP550 ASN551 SER552 ASP553 LEU554 SER555 ALA556
Unit 2 ASP346 LYS347 ILE348 ILE349 HIS350 LEU351 THR352 ASP353 ASP354 SER355 PHE356 ASP357 THR358 ASP359 VAL360 LEU361 LYS362 ALA363 ASP364 GLY365 ALA366 ILE367 LEU368 VAL369 ASP370 PHE371 TRP372 ALA373 GLU374 TRP375 CYS376 GLY377 PRO378 CYS379 LYS380 MET381 ILE382 ALA383 PRO384 ILE385 LEU386 ASP387 GLU388 ILE389 ALA390 ASP391 GLU392 TYR393 GLN394 GLY395 LYS396 LEU397 THR398 VAL399 ALA400 LYS401 LEU402 ASN403 ILE404 ASP405 GLN406 ASN407 PRO408 GLY409 THR410 ALA411 PRO412 LYS413 TYR414 GLY415 ILE416 ARG417 GLY418 ILE419 PRO420 THR421 LEU422 LEU423 LEU424 PHE425 LYS426 ASN427 GLY428 GLU429 VAL430 ALA431 ALA432 THR433 LYS434 VAL435 GLY436 ALA437 LEU438 SER439 LYS440 GLY441 GLN442 LEU443 LYS444 GLU445 PHE446 LEU447 ASP448 ALA449 ASN450 LEU451 ALA452 GLY453 SER454 ALA455 MET456 GLU457 SER458 THR459 VAL460 MET461 VAL462 LEU463 ARG464 ASN465 MET466 VAL467 ASP468 PRO469 LYS470 ASP471 ILE472 ASP473 ASP474 ASP475 LEU476 GLU477 GLY478 GLU479 VAL480 THR481 GLU482 GLU483 CYS484 GLY485 LYS486 PHE487 GLY488 ALA489 VAL490 ASN491 ARG492 VAL493 ILE494 ILE495 TYR496 GLN497 GLU498 LYS499 GLN500 GLY501 GLU502 GLU503 GLU504 ASP505 ALA506 GLU507 ILE508 ILE509 VAL510 LYS511 ILE512 PHE513 VAL514 GLU515 PHE516 SER517 ILE518 ALA519 SER520 GLU521 THR522 HIS523 LYS524 ALA525 ILE526 GLN527 ALA528 LEU529 ASN530 GLY531 ARG532 TRP533 PHE534 ALA535 GLY536 ARG537 LYS538 VAL539 VAL540 ALA541 GLU542 VAL543 TYR544 ASP545 GLN546 GLU547 ARG548 PHE549 ASP550 ASN551 SER552 ASP553 LEU554 SER555 ALA556
Unit 3 ASP346 LYS347 ILE348 ILE349 HIS350 LEU351 THR352 ASP353 ASP354 SER355 PHE356 ASP357 THR358 ASP359 VAL360 LEU361 LYS362 ALA363 ASP364 GLY365 ALA366 ILE367 LEU368 VAL369 ASP370 PHE371 TRP372 ALA373 GLU374 TRP375 CYS376 GLY377 PRO378 CYS379 LYS380 MET381 ILE382 ALA383 PRO384 ILE385 LEU386 ASP387 GLU388 ILE389 ALA390 ASP391 GLU392 TYR393 GLN394 GLY395 LYS396 LEU397 THR398 VAL399 ALA400 LYS401 LEU402 ASN403 ILE404 ASP405 GLN406 ASN407 PRO408 GLY409 THR410 ALA411 PRO412 LYS413 TYR414 GLY415 ILE416 ARG417 GLY418 ILE419 PRO420 THR421 LEU422 LEU423 LEU424 PHE425 LYS426 ASN427 GLY428 GLU429 VAL430 ALA431 ALA432 THR433 LYS434 VAL435 GLY436 ALA437 LEU438 SER439 LYS440 GLY441 GLN442 LEU443 LYS444 GLU445 PHE446 LEU447 ASP448 ALA449 ASN450 LEU451 ALA452 GLY453 SER454 ALA455 MET456 GLU457 SER458 THR459 VAL460 MET461 VAL462 LEU463 ARG464 ASN465 MET466 VAL467 ASP468 PRO469 LYS470 ASP471 ILE472 ASP473 ASP474 ASP475 LEU476 GLU477 GLY478 GLU479 VAL480 THR481 GLU482 GLU483 CYS484 GLY485 LYS486 PHE487 GLY488 ALA489 VAL490 ASN491 ARG492 VAL493 ILE494 ILE495 TYR496 GLN497 GLU498 LYS499 GLN500 GLY501 GLU502 GLU503 GLU504 ASP505 ALA506 GLU507 ILE508 ILE509 VAL510 LYS511 ILE512 PHE513 VAL514 GLU515 PHE516 SER517 ILE518 ALA519 SER520 GLU521 THR522 HIS523 LYS524 ALA525 ILE526 GLN527 ALA528 LEU529 ASN530 GLY531 ARG532 TRP533 PHE534 ALA535 GLY536 ARG537 LYS538 VAL539 VAL540 ALA541 GLU542 VAL543 TYR544 ASP545 GLN546 GLU547 ARG548 PHE549 ASP550 ASN551 SER552 ASP553 LEU554 SER555 ALA556
Unit 4 HIS341 HIS342 PRO343 MET344 SER345 ASP346 LYS347 ILE348 ILE349 HIS350 LEU351 THR352 ASP353 ASP354 SER355 PHE356 ASP357 THR358 ASP359 VAL360 LEU361 LYS362 ALA363 ASP364 GLY365 ALA366 ILE367 LEU368 VAL369 ASP370 PHE371 TRP372 ALA373 GLU374 TRP375 CYS376 GLY377 PRO378 CYS379 LYS380 MET381 ILE382 ALA383 PRO384 ILE385 LEU386 ASP387 GLU388 ILE389 ALA390 ASP391 GLU392 TYR393 GLN394 GLY395 LYS396 LEU397 THR398 VAL399 ALA400 LYS401 LEU402 ASN403 ILE404 ASP405 GLN406 ASN407 PRO408 GLY409 THR410 ALA411 PRO412 LYS413 TYR414 GLY415 ILE416 ARG417 GLY418 ILE419 PRO420 THR421 LEU422 LEU423 LEU424 PHE425 LYS426 ASN427 GLY428 GLU429 VAL430 ALA431 ALA432 THR433 LYS434 VAL435 GLY436 ALA437 LEU438 SER439 LYS440 GLY441 GLN442 LEU443 LYS444 GLU445 PHE446 LEU447 ASP448 ALA449 ASN450 LEU451 ALA452 GLY453 SER454 ALA455 MET456 GLU457 SER458 THR459 VAL460 MET461 VAL462 LEU463 ARG464 ASN465 MET466 VAL467 ASP468 PRO469 LYS470 ASP471 ILE472 ASP473 ASP474 ASP475 LEU476 GLU477 GLY478 GLU479 VAL480 THR481 GLU482 GLU483 CYS484 GLY485 LYS486 PHE487 GLY488 ALA489 VAL490 ASN491 ARG492 VAL493 ILE494 ILE495 TYR496 GLN497 GLU498 LYS499 GLN500 GLY501 GLU502 GLU503 GLU504 ASP505 ALA506 GLU507 ILE508 ILE509 VAL510 LYS511 ILE512 PHE513 VAL514 GLU515 PHE516 SER517 ILE518 ALA519 SER520 GLU521 THR522 HIS523 LYS524 ALA525 ILE526 GLN527 ALA528 LEU529 ASN530 GLY531 ARG532 TRP533 PHE534 ALA535 GLY536 ARG537 LYS538 VAL539 VAL540 ALA541 GLU542 VAL543 TYR544 ASP545 GLN546 GLU547 ARG548 PHE549 ASP550 ASN551 SER552 ASP553 LEU554 SER555 ALA556
Unit 5 LYS347 ILE348 ILE349 HIS350 LEU351 THR352 ASP353 ASP354 SER355 PHE356 ASP357 THR358 ASP359 VAL360 LEU361 LYS362 ALA363 ASP364 GLY365 ALA366 ILE367 LEU368 VAL369 ASP370 PHE371 TRP372 ALA373 GLU374 TRP375 CYS376 GLY377 PRO378 CYS379 LYS380 MET381 ILE382 ALA383 PRO384 ILE385 LEU386 ASP387 GLU388 ILE389 ALA390 ASP391 GLU392 TYR393 GLN394 GLY395 LYS396 LEU397 THR398 VAL399 ALA400 LYS401 LEU402 ASN403 ILE404 ASP405 GLN406 ASN407 PRO408 GLY409 THR410 ALA411 PRO412 LYS413 TYR414 GLY415 ILE416 ARG417 GLY418 ILE419 PRO420 THR421 LEU422 LEU423 LEU424 PHE425 LYS426 ASN427 GLY428 GLU429 VAL430 ALA431 ALA432 THR433 LYS434 VAL435 GLY436 ALA437 LEU438 SER439 LYS440 GLY441 GLN442 LEU443 LYS444 GLU445 PHE446 LEU447 ASP448 ALA449 ASN450 LEU451 ALA452 GLY453 SER454 ALA455 MET456 GLU457 SER458 THR459 VAL460 MET461 VAL462 LEU463 ARG464 ASN465 MET466 VAL467 ASP468 PRO469 LYS470 ASP471 ILE472 ASP473 ASP474 ASP475 LEU476 GLU477 GLY478 GLU479 VAL480 THR481 GLU482 GLU483 CYS484 GLY485 LYS486 PHE487 GLY488 ALA489 VAL490 ASN491 ARG492 VAL493 ILE494 ILE495 TYR496 GLN497 GLU498 LYS499 GLN500 GLY501 GLU502 GLU503 GLU504 ASP505 ALA506 GLU507 ILE508 ILE509 VAL510 LYS511 ILE512 PHE513 VAL514 GLU515 PHE516 SER517 ILE518 ALA519 SER520 GLU521 THR522 HIS523 LYS524 ALA525 ILE526 GLN527 ALA528 LEU529 ASN530 GLY531 ARG532 TRP533 PHE534 ALA535 GLY536 ARG537 LYS538 VAL539 VAL540 ALA541 GLU542 VAL543 TYR544 ASP545 GLN546 GLU547 ARG548 PHE549 ASP550 ASN551 SER552 ASP553 LEU554 SER555 ALA556
Unit 6 ASP346 LYS347 ILE348 ILE349 HIS350 LEU351 THR352 ASP353 ASP354 SER355 PHE356 ASP357 THR358 ASP359 VAL360 LEU361 LYS362 ALA363 ASP364 GLY365 ALA366 ILE367 LEU368 VAL369 ASP370 PHE371 TRP372 ALA373 GLU374 TRP375 CYS376 GLY377 PRO378 CYS379 LYS380 MET381 ILE382 ALA383 PRO384 ILE385 LEU386 ASP387 GLU388 ILE389 ALA390 ASP391 GLU392 TYR393 GLN394 GLY395 LYS396 LEU397 THR398 VAL399 ALA400 LYS401 LEU402 ASN403 ILE404 ASP405 GLN406 ASN407 PRO408 GLY409 THR410 ALA411 PRO412 LYS413 TYR414 GLY415 ILE416 ARG417 GLY418 ILE419 PRO420 THR421 LEU422 LEU423 LEU424 PHE425 LYS426 ASN427 GLY428 GLU429 VAL430 ALA431 ALA432 THR433 LYS434 VAL435 GLY436 ALA437 LEU438 SER439 LYS440 GLY441 GLN442 LEU443 LYS444 GLU445 PHE446 LEU447 ASP448 ALA449 ASN450 LEU451 ALA452 GLY453 SER454 ALA455 MET456 GLU457 SER458 THR459 VAL460 MET461 VAL462 LEU463 ARG464 ASN465 MET466 VAL467 ASP468 PRO469 LYS470 ASP471 ILE472 ASP473 ASP474 ASP475 LEU476 GLU477 GLY478 GLU479 VAL480 THR481 GLU482 GLU483 CYS484 GLY485 LYS486 PHE487 GLY488 ALA489 VAL490 ASN491 ARG492 VAL493 ILE494 ILE495 TYR496 GLN497 GLU498 LYS499 GLN500 GLY501 GLU502 GLU503 GLU504 ASP505 ALA506 GLU507 ILE508 ILE509 VAL510 LYS511 ILE512 PHE513 VAL514 GLU515 PHE516 SER517 ILE518 ALA519 SER520 GLU521 THR522 HIS523 LYS524 ALA525 ILE526 GLN527 ALA528 LEU529 ASN530 GLY531 ARG532 TRP533 PHE534 ALA535 GLY536 ARG537 LYS538 VAL539 VAL540 ALA541 GLU542 VAL543 TYR544 ASP545 GLN546 GLU547 ARG548 PHE549 ASP550 ASN551 SER552 ASP553 LEU554 SER555 ALA556
Unit 7 ASP346 LYS347 ILE348 ILE349 HIS350 LEU351 THR352 ASP353 ASP354 SER355 PHE356 ASP357 THR358 ASP359 VAL360 LEU361 LYS362 ALA363 ASP364 GLY365 ALA366 ILE367 LEU368 VAL369 ASP370 PHE371 TRP372 ALA373 GLU374 TRP375 CYS376 GLY377 PRO378 CYS379 LYS380 MET381 ILE382 ALA383 PRO384 ILE385 LEU386 ASP387 GLU388 ILE389 ALA390 ASP391 GLU392 TYR393 GLN394 GLY395 LYS396 LEU397 THR398 VAL399 ALA400 LYS401 LEU402 ASN403 ILE404 ASP405 GLN406 ASN407 PRO408 GLY409 THR410 ALA411 PRO412 LYS413 TYR414 GLY415 ILE416 ARG417 GLY418 ILE419 PRO420 THR421 LEU422 LEU423 LEU424 PHE425 LYS426 ASN427 GLY428 GLU429 VAL430 ALA431 ALA432 THR433 LYS434 VAL435 GLY436 ALA437 LEU438 SER439 LYS440 GLY441 GLN442 LEU443 LYS444 GLU445 PHE446 LEU447 ASP448 ALA449 ASN450 LEU451 ALA452 GLY453 SER454 ALA455 MET456 GLU457 SER458 THR459 VAL460 MET461 VAL462 LEU463 ARG464 ASN465 MET466 VAL467 ASP468 PRO469 LYS470 ASP471 ILE472 ASP473 ASP474 ASP475 LEU476 GLU477 GLY478 GLU479 VAL480 THR481 GLU482 GLU483 CYS484 GLY485 LYS486 PHE487 GLY488 ALA489 VAL490 ASN491 ARG492 VAL493 ILE494 ILE495 TYR496 GLN497 GLU498 LYS499 GLN500 GLY501 GLU502 GLU503 GLU504 ASP505 ALA506 GLU507 ILE508 ILE509 VAL510 LYS511 ILE512 PHE513 VAL514 GLU515 PHE516 SER517 ILE518 ALA519 SER520 GLU521 THR522 HIS523 LYS524 ALA525 ILE526 GLN527 ALA528 LEU529 ASN530 GLY531 ARG532 TRP533 PHE534 ALA535 GLY536 ARG537 LYS538 VAL539 VAL540 ALA541 GLU542 VAL543 TYR544 ASP545 GLN546 GLU547 ARG548 PHE549 ASP550 ASN551 SER552 ASP553 LEU554 SER555 ALA556
Unit 8 ASP346 LYS347 ILE348 ILE349 HIS350 LEU351 THR352 ASP353 ASP354 SER355 PHE356 ASP357 THR358 ASP359 VAL360 LEU361 LYS362 ALA363 ASP364 GLY365 ALA366 ILE367 LEU368 VAL369 ASP370 PHE371 TRP372 ALA373 GLU374 TRP375 CYS376 GLY377 PRO378 CYS379 LYS380 MET381 ILE382 ALA383 PRO384 ILE385 LEU386 ASP387 GLU388 ILE389 ALA390 ASP391 GLU392 TYR393 GLN394 GLY395 LYS396 LEU397 THR398 VAL399 ALA400 LYS401 LEU402 ASN403 ILE404 ASP405 GLN406 ASN407 PRO408 GLY409 THR410 ALA411 PRO412 LYS413 TYR414 GLY415 ILE416 ARG417 GLY418 ILE419 PRO420 THR421 LEU422 LEU423 LEU424 PHE425 LYS426 ASN427 GLY428 GLU429 VAL430 ALA431 ALA432 THR433 LYS434 VAL435 GLY436 ALA437 LEU438 SER439 LYS440 GLY441 GLN442 LEU443 LYS444 GLU445 PHE446 LEU447 ASP448 ALA449 ASN450 LEU451 ALA452 GLY453 SER454 ALA455 MET456 GLU457 SER458 THR459 VAL460 MET461 VAL462 LEU463 ARG464 ASN465 MET466 VAL467 ASP468 PRO469 LYS470 ASP471 ILE472 ASP473 ASP474 ASP475 LEU476 GLU477 GLY478 GLU479 VAL480 THR481 GLU482 GLU483 CYS484 GLY485 LYS486 PHE487 GLY488 ALA489 VAL490 ASN491 ARG492 VAL493 ILE494 ILE495 TYR496 GLN497 GLU498 LYS499 GLN500 GLY501 GLU502 GLU503 GLU504 ASP505 ALA506 GLU507 ILE508 ILE509 VAL510 LYS511 ILE512 PHE513 VAL514 GLU515 PHE516 SER517 ILE518 ALA519 SER520 GLU521 THR522 HIS523 LYS524 ALA525 ILE526 GLN527 ALA528 LEU529 ASN530 GLY531 ARG532 TRP533 PHE534 ALA535 GLY536 ARG537 LYS538 VAL539 VAL540 ALA541 GLU542 VAL543 TYR544 ASP545 GLN546 GLU547 ARG548 PHE549 ASP550 ASN551 SER552 ASP553 LEU554 SER555 ALA556

Ligands
Unit 9 CL1
Unit 10 CL1 EDO557
Unit 11 CL1
Unit 12 CL1

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany