Chain A from PDB Type:PROTEIN Length:162
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:173
29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189
CLPP_BACSU 20 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTH 192
SCOP domains d3tt6a_ A: Clp protease, ClpP subunit SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eee....-----------..hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh....eehhhhhhhh...ee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3tt6 A 19 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQP-----------EIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTH 191
28 38 48 58 68 78 88 98 108 118 | - 138 148 158 168 178 188
124 136
Chain B from PDB Type:PROTEIN Length:162
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:173
29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189
CLPP_BACSU 20 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTH 192
SCOP domains d3tt6b_ B: Clp protease, ClpP subunit SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eee....-----------..hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh.....hhhhhhhhh...ee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3tt6 B 19 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQP-----------EIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTH 191
28 38 48 58 68 78 88 98 108 118 | - 138 148 158 168 178 188
124 136
Chain C from PDB Type:PROTEIN Length:161
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:172
29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189
CLPP_BACSU 20 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILT 191
SCOP domains d3tt6c_ C: Clp protease, ClpP subunit SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eee....-----------.hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh....eehhhhhhh....ee.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H------------------------------------------------------------------ PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3tt6 C 19 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQP-----------EIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILT 190
28 38 48 58 68 78 88 98 108 118 | - 138 148 158 168 178 188
124 136
Chain D from PDB Type:PROTEIN Length:162
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:173
29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189
CLPP_BACSU 20 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTH 192
SCOP domains d3tt6d_ D: Clp protease, ClpP subunit SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eee....-----------..hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh....eehhhhhhh....ee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3tt6 D 19 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQP-----------EIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTH 191
28 38 48 58 68 78 88 98 108 118 | - 138 148 158 168 178 188
124 136
Chain E from PDB Type:PROTEIN Length:160
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:172
29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189
CLPP_BACSU 20 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILT 191
SCOP domains d3tt6e_ E: Clp protease, ClpP subunit SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eee...------------..hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh....eehhhhhhh....ee.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H------------------------------------------------------------------ PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3tt6 E 19 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQ------------EIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILT 190
28 38 48 58 68 78 88 98 108 118 | - 138 148 158 168 178 188
123 136
Chain F from PDB Type:PROTEIN Length:160
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:173
29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189
CLPP_BACSU 20 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTH 192
SCOP domains d3tt6f_ F: Clp protease, ClpP subunit SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eee....-------------.hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh...eehhhhhhh....ee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3tt6 F 19 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQP-------------AAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTH 191
28 38 48 58 68 78 88 98 108 118 | - 138 148 158 168 178 188
124 138
Chain G from PDB Type:PROTEIN Length:161
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:173
29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189
CLPP_BACSU 20 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTH 192
SCOP domains d3tt6g_ G: Clp protease, ClpP subunit SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eee....------------.hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh.....hhhhhhhh....ee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3tt6 G 19 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQP------------IAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTH 191
28 38 48 58 68 78 88 98 108 118 | - 138 148 158 168 178 188
124 137
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |