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(-) Description

Title :  CRYSTAL STRUCTURE OF MONOACYLGLYCEROL LIPASE FROM BACILLUS SP. H257 IN COMPLEX WITH PMSF
 
Authors :  S. Rengachari, G. A. Bezerra, K. Gruber, M. Oberer
Date :  19 Apr 11  (Deposition) - 23 May 12  (Release) - 10 Oct 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.85
Chains :  Asym./Biol. Unit :  A
Keywords :  Alpha/Beta Hydrolase, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Rengachari, G. A. Bezerra, L. Riegler-Berket, C. C. Gruber, C. Sturm, U. Taschler, A. Boeszoermenyi, I. Dreveny, R. Zimmermann, K. Gruber, M. Oberer
The Structure Of Monoacylglycerol Lipase From Bacillus Sp. H257 Reveals Unexpected Conservation Of The Cap Architectur Between Bacterial And Human Enzymes.
Biochim. Biophys. Acta V. 1821 1012 2012
PubMed-ID: 22561231  |  Reference-DOI: 10.1016/J.BBALIP.2012.04.006

(-) Compounds

Molecule 1 - THERMOSTABLE MONOACYLGLYCEROL LIPASE
    Chains: A
    EC Number: 3.1.1.23
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28A(+)
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Scientific: BACILLUS SP.
    Organism Taxid: 129908
    Strain: H257
    Synonym: MGLP

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1MRD1Ligand/Ion(4R)-2-METHYLPENTANE-2,4-DIOL
2PMS1Ligand/IonPHENYLMETHANESULFONIC ACID

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL A:21 , ALA A:46 , GLY A:47 , HOH A:258BINDING SITE FOR RESIDUE MRD A 5276
2AC2SOFTWAREPHE A:29 , SER A:97 , MET A:98 , HIS A:226BINDING SITE FOR RESIDUE PMS A 400

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3RLI)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3RLI)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3RLI)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3RLI)

(-) Exons   (0, 0)

(no "Exon" information available for 3RLI)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:243
 aligned with MGLP_BAC25 | P82597 from UniProtKB/Swiss-Prot  Length:250

    Alignment length:249
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240         
           MGLP_BAC25     1 MSEQYPVLSGAEPFYAENGPVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKHA 249
               SCOP domains d3rlia_ A: automated matches                                                                                                                                                                                                                              SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............eee....eeeeee.....hhhhhhhhhhhhhhh..eeee........hhhhhhh.hhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhh....eeeee.....hhhhhhh------...eee.................eeehhhhhhhhhhhhhhhhhhhhh...eeeeee........hhhhhhhhhh....eeeeee.....hhhhh.hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3rli A   1 MSEQYPVLSGAEPFYAENGPVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVDIPAIAAG------LPRYLDSIGSDLKNPDVKELAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKHA 249
                                    10        20        30        40        50        60        70        80        90       100       110       120       130|      140       150       160       170       180       190       200       210       220       230       240         
                                                                                                                                                            131    138
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3RLI)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3RLI)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (MGLP_BAC25 | P82597)
molecular function
    GO:0047372    acylglycerol lipase activity    Catalysis of the reaction: H2O + acylglycerol = a fatty acid + glycerol.
    GO:0052689    carboxylic ester hydrolase activity    Catalysis of the hydrolysis of a carboxylic ester bond.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.

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        MGLP_BAC25 | P82597: 3rm3 4ke6 4ke7 4ke8 4ke9 4kea 4lhe

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