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Summary Information (see also Sequences/Alignments below) |
Asymmetric/Biological Unit (2, 8) |
Asymmetric Unit (8, 8)
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(no "SS Bond" information available for 3QJD) |
Asymmetric/Biological Unit
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Asymmetric/Biological Unit (403, 806)
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Asymmetric/Biological Unit (1, 4) |
Asymmetric/Biological Unit (6, 12)
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Asymmetric/Biological UnitChain A from PDB Type:PROTEIN Length:141 aligned with HBA_HUMAN | P69905 from UniProtKB/Swiss-Prot Length:142 Alignment length:141 11 21 31 41 51 61 71 81 91 101 111 121 131 141 HBA_HUMAN 2 VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR 142 SCOP domains d3qjda_ A: Hemoglobin, alpha-chain SCOP domains CATH domains --------------------------------------------------------------------------------------------------------------------------------------------- CATH domains Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) (1) ER--DAE-TFEDPRRM-DDQDDGH-ED--KK--R--R--MS-LLQ-ARRRD-DR-RRQDNNMDY---K--ER-AAKRHGRCD-RVRNS-MFQ-AA-K-E--RR-----RD-DHLDA---EMQ--PGN-PDP-R-EM-PEHC SAPs(SNPs) (1) SAPs(SNPs) (2) ----PG---------N-RERP-K--VG---S------------RR-G---R----T-YV-T---------V--GHT-K------Y-R---PW-YT-------Y----------R----------RV---P-----P--T-H SAPs(SNPs) (2) SAPs(SNPs) (3) -----N--------------------V-------------------H--------------------------N---------------------------------------S-----------Y---------R----L SAPs(SNPs) (3) SAPs(SNPs) (4) -----V----------------------------------------Y---------------------------------------------------------------------------------------------P SAPs(SNPs) (4) SAPs(SNPs) (5) -----Y--------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (5) PROSITE (2) -GLOBIN PDB: A:2-141 UniProt: 3-142 PROSITE (2) Transcript 1 (1) Exon 1.3a PDB: A:1-31 --------------------------------------------------------------------Exon 1.4b PDB: A:100-141 UniProt: 101-142 Transcript 1 (1) Transcript 1 (2) ------------------------------Exon 1.3e PDB: A:31-99 UniProt: 32-100 ------------------------------------------ Transcript 1 (2) 3qjd A 1 VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGLGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR 141 10 20 30 40 50 60 70 80 90 100 110 120 130 140 Chain B from PDB Type:PROTEIN Length:146 aligned with HBB_HUMAN | P68871 from UniProtKB/Swiss-Prot Length:147 Alignment length:146 11 21 31 41 51 61 71 81 91 101 111 121 131 141 HBB_HUMAN 2 VHLTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH 147 SCOP domains d3qjdb_ B: Hemoglobin, beta-chain SCOP domains CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) (1) AL--RAGECDD-DPGDEMDMGADDDKDPDSPR-DFRGNE-YLQCSEAPFKRA-DKRKREAEDY-MTAHDDS-GRPDDRYKHMDI-DIPNDPDRGMPLGELDSLS--RKMPAF-MDLP-AEA-IQ-AEDPDENLEDD-PDDRDDECD SAPs(SNPs) (1) SAPs(SNPs) (2) -Q---KKQ-VI--RRRN-K-HGFRRVSQ---V-F-SR-K--S----G----H--------MP--N-DPR---VVR-R---RNR---KRRKRN-HNVP--RGY-T-------R-PPQR--IG--R-EK-VSKQ--P---KT--P-HL SAPs(SNPs) (2) SAPs(SNPs) (3) -R---Q-T--------Q-S-NKGV--V------L-TS-R-------Y-------------N---Q-G-S---Y---Y---V-----P----P-N--Q---K----------Y----Y--QK--S-G----P-------SV--Q--P SAPs(SNPs) (3) SAPs(SNPs) (4) -Y---V--------------YQ--------------------------------------------M------------------------Q----Y---Q-------------------Q---------R-------Y---R--Q SAPs(SNPs) (4) SAPs(SNPs) (5) ---------------------V--------------------------------------------------------------------------------------------------V------------------------- SAPs(SNPs) (5) PROSITE GLOBIN PDB: B:1-146 UniProt: 2-147 PROSITE Transcript 2 (1) Exon 2.3a PDB: B:1-30 --------------------------------------------------------------------------Exon 2.5b PDB: B:105-146 UniProt: 106-147 Transcript 2 (1) Transcript 2 (2) -----------------------------Exon 2.4c PDB: B:30-104 UniProt: 31-105 ------------------------------------------ Transcript 2 (2) 3qjd B 1 VHLTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH 146 10 20 30 40 50 60 70 80 90 100 110 120 130 140 Chain C from PDB Type:PROTEIN Length:141 aligned with HBA_HUMAN | P69905 from UniProtKB/Swiss-Prot Length:142 Alignment length:141 11 21 31 41 51 61 71 81 91 101 111 121 131 141 HBA_HUMAN 2 VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR 142 SCOP domains d3qjdc_ C: Hemoglobin, alpha-chain SCOP domains CATH domains --------------------------------------------------------------------------------------------------------------------------------------------- CATH domains Pfam domains (1) -----Globin-3qjdC01 C:6-106 ----------------------------------- Pfam domains (1) Pfam domains (2) -----Globin-3qjdC02 C:6-106 ----------------------------------- Pfam domains (2) SAPs(SNPs) (1) ER--DAE-TFEDPRRM-DDQDDGH-ED--KK--R--R--MS-LLQ-ARRRD-DR-RRQDNNMDY---K--ER-AAKRHGRCD-RVRNS-MFQ-AA-K-E--RR-----RD-DHLDA---EMQ--PGN-PDP-R-EM-PEHC SAPs(SNPs) (1) SAPs(SNPs) (2) ----PG---------N-RERP-K--VG---S------------RR-G---R----T-YV-T---------V--GHT-K------Y-R---PW-YT-------Y----------R----------RV---P-----P--T-H SAPs(SNPs) (2) SAPs(SNPs) (3) -----N--------------------V-------------------H--------------------------N---------------------------------------S-----------Y---------R----L SAPs(SNPs) (3) SAPs(SNPs) (4) -----V----------------------------------------Y---------------------------------------------------------------------------------------------P SAPs(SNPs) (4) SAPs(SNPs) (5) -----Y--------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (5) PROSITE (2) -GLOBIN PDB: C:2-141 UniProt: 3-142 PROSITE (2) Transcript 1 (1) Exon 1.3a PDB: C:1-31 --------------------------------------------------------------------Exon 1.4b PDB: C:100-141 UniProt: 101-142 Transcript 1 (1) Transcript 1 (2) ------------------------------Exon 1.3e PDB: C:31-99 UniProt: 32-100 ------------------------------------------ Transcript 1 (2) 3qjd C 1 VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGLGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR 141 10 20 30 40 50 60 70 80 90 100 110 120 130 140 Chain D from PDB Type:PROTEIN Length:146 aligned with HBB_HUMAN | P68871 from UniProtKB/Swiss-Prot Length:147 Alignment length:146 11 21 31 41 51 61 71 81 91 101 111 121 131 141 HBB_HUMAN 2 VHLTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH 147 SCOP domains d3qjdd_ D: Hemoglobin, beta-chain SCOP domains CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains Pfam domains (1) ------Globin-3qjdD01 D:7-111 ----------------------------------- Pfam domains (1) Pfam domains (2) ------Globin-3qjdD02 D:7-111 ----------------------------------- Pfam domains (2) SAPs(SNPs) (1) AL--RAGECDD-DPGDEMDMGADDDKDPDSPR-DFRGNE-YLQCSEAPFKRA-DKRKREAEDY-MTAHDDS-GRPDDRYKHMDI-DIPNDPDRGMPLGELDSLS--RKMPAF-MDLP-AEA-IQ-AEDPDENLEDD-PDDRDDECD SAPs(SNPs) (1) SAPs(SNPs) (2) -Q---KKQ-VI--RRRN-K-HGFRRVSQ---V-F-SR-K--S----G----H--------MP--N-DPR---VVR-R---RNR---KRRKRN-HNVP--RGY-T-------R-PPQR--IG--R-EK-VSKQ--P---KT--P-HL SAPs(SNPs) (2) SAPs(SNPs) (3) -R---Q-T--------Q-S-NKGV--V------L-TS-R-------Y-------------N---Q-G-S---Y---Y---V-----P----P-N--Q---K----------Y----Y--QK--S-G----P-------SV--Q--P SAPs(SNPs) (3) SAPs(SNPs) (4) -Y---V--------------YQ--------------------------------------------M------------------------Q----Y---Q-------------------Q---------R-------Y---R--Q SAPs(SNPs) (4) SAPs(SNPs) (5) ---------------------V--------------------------------------------------------------------------------------------------V------------------------- SAPs(SNPs) (5) PROSITE GLOBIN PDB: D:1-146 UniProt: 2-147 PROSITE Transcript 2 (1) Exon 2.3a PDB: D:1-30 --------------------------------------------------------------------------Exon 2.5b PDB: D:105-146 UniProt: 106-147 Transcript 2 (1) Transcript 2 (2) -----------------------------Exon 2.4c PDB: D:30-104 UniProt: 31-105 ------------------------------------------ Transcript 2 (2) 3qjd D 1 VHLTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH 146 10 20 30 40 50 60 70 80 90 100 110 120 130 140
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Asymmetric/Biological Unit |
(no "CATH Domain" information available for 3QJD) |
Asymmetric/Biological Unit
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Asymmetric/Biological Unit(hide GO term definitions) Chain A,C (HBA_HUMAN | P69905)
Chain B,D (HBB_HUMAN | P68871)
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