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(-) Description

Title :  CRYSTAL STRUCTURE OF AN ASCOMYCETE FUNGAL LACCASE FROM THIELAVIA ARENARIA
 
Authors :  J. P. Kallio, J. Rouvinen, N. Hakulinen
Date :  25 Nov 10  (Deposition) - 18 May 11  (Release) - 24 Aug 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Beta Barrel, Cupredoxin Fold, Oxidoreductase, Copper Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. P. Kallio, C. Gasparetti, M. Andberg, H. Boer, A. Koivula, K. Kruus, J. Rouvinen, N. Hakulinen
Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria--Common Structural Features Of Asco-Laccases.
Febs J. V. 278 2283 2011
PubMed-ID: 21535408  |  Reference-DOI: 10.1111/J.1742-4658.2011.08146.X

(-) Compounds

Molecule 1 - LACCASE
    Chains: A, B, C, D
    EC Number: 1.10.3.2
    Engineered: YES
    Expression System: TRICHODERMA REESEI
    Expression System Taxid: 431241
    Organism Scientific: THIELAVIA ARENARIA
    Organism Taxid: 113610

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 63)

Asymmetric Unit (5, 63)
No.NameCountTypeFull Name
1BMA5Ligand/IonBETA-D-MANNOSE
2CU16Ligand/IonCOPPER (II) ION
3MAN7Ligand/IonALPHA-D-MANNOSE
4NAG34Ligand/IonN-ACETYL-D-GLUCOSAMINE
5OXY1Ligand/IonOXYGEN MOLECULE
Biological Unit 1 (4, 14)
No.NameCountTypeFull Name
1BMA1Ligand/IonBETA-D-MANNOSE
2CU-1Ligand/IonCOPPER (II) ION
3MAN3Ligand/IonALPHA-D-MANNOSE
4NAG9Ligand/IonN-ACETYL-D-GLUCOSAMINE
5OXY1Ligand/IonOXYGEN MOLECULE
Biological Unit 2 (3, 12)
No.NameCountTypeFull Name
1BMA1Ligand/IonBETA-D-MANNOSE
2CU-1Ligand/IonCOPPER (II) ION
3MAN2Ligand/IonALPHA-D-MANNOSE
4NAG9Ligand/IonN-ACETYL-D-GLUCOSAMINE
5OXY-1Ligand/IonOXYGEN MOLECULE
Biological Unit 3 (2, 10)
No.NameCountTypeFull Name
1BMA1Ligand/IonBETA-D-MANNOSE
2CU-1Ligand/IonCOPPER (II) ION
3MAN-1Ligand/IonALPHA-D-MANNOSE
4NAG9Ligand/IonN-ACETYL-D-GLUCOSAMINE
5OXY-1Ligand/IonOXYGEN MOLECULE
Biological Unit 4 (3, 11)
No.NameCountTypeFull Name
1BMA2Ligand/IonBETA-D-MANNOSE
2CU-1Ligand/IonCOPPER (II) ION
3MAN2Ligand/IonALPHA-D-MANNOSE
4NAG7Ligand/IonN-ACETYL-D-GLUCOSAMINE
5OXY-1Ligand/IonOXYGEN MOLECULE

(-) Sites  (63, 63)

Asymmetric Unit (63, 63)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:432 , CYS A:504 , HIS A:509BINDING SITE FOR RESIDUE CU A 601
02AC2SOFTWAREHIS A:141 , HIS A:437 , HIS A:503 , OXY A:620BINDING SITE FOR RESIDUE CU A 602
03AC3SOFTWAREHIS A:96 , HIS A:139 , HIS A:505 , OXY A:620BINDING SITE FOR RESIDUE CU A 603
04AC4SOFTWAREHIS A:94 , HIS A:435 , HIS A:437 , OXY A:620 , HOH A:727BINDING SITE FOR RESIDUE CU A 604
05AC5SOFTWAREHIS A:94 , HIS A:96 , HIS A:139 , HIS A:141 , HIS A:435 , HIS A:437 , HIS A:503 , HIS A:505 , CU A:602 , CU A:603 , CU A:604BINDING SITE FOR RESIDUE OXY A 620
06AC6SOFTWARETHR A:88 , ASN A:89 , PHE A:142 , ASP A:182 , ASN A:555 , PHE A:557 , HOH A:573 , NAG A:701BINDING SITE FOR RESIDUE NAG A 700
07AC7SOFTWAREASN A:56 , SER A:180 , PHE A:557 , HOH A:574 , HOH A:608 , NAG A:700BINDING SITE FOR RESIDUE NAG A 701
08AC8SOFTWARELEU A:168 , VAL A:170 , ASN A:202 , TYR A:216 , LEU A:228 , HOH A:585 , NAG A:711BINDING SITE FOR RESIDUE NAG A 710
09AC9SOFTWAREARG A:71 , LEU A:168 , GLY A:169 , NAG A:710 , BMA A:712 , HOH A:732BINDING SITE FOR RESIDUE NAG A 711
10BC1SOFTWARENAG A:711 , MAN A:713 , MAN A:714BINDING SITE FOR RESIDUE BMA A 712
11BC2SOFTWAREHOH A:688 , BMA A:712BINDING SITE FOR RESIDUE MAN A 713
12BC3SOFTWAREBMA A:712 , MAN A:715BINDING SITE FOR RESIDUE MAN A 714
13BC4SOFTWAREPRO A:8 , ARG A:11 , MAN A:714BINDING SITE FOR RESIDUE MAN A 715
14BC5SOFTWAREGLN A:214 , TRP A:215 , ASN A:217BINDING SITE FOR RESIDUE NAG A 720
15BC6SOFTWAREASN A:247BINDING SITE FOR RESIDUE NAG A 730
16BC7SOFTWARETRP A:215 , TRP A:288 , ASN A:290 , PHE A:305 , GLN A:323 , LEU A:325 , HOH A:623 , NAG A:741BINDING SITE FOR RESIDUE NAG A 740
17BC8SOFTWAREPHE A:305 , GLN A:323 , NAG A:740BINDING SITE FOR RESIDUE NAG A 741
18BC9SOFTWAREPRO A:355 , THR A:358 , LEU A:359 , ASN A:376 , TRP A:417 , HOH A:597BINDING SITE FOR RESIDUE NAG A 760
19CC1SOFTWAREHIS B:432 , CYS B:504 , HIS B:509BINDING SITE FOR RESIDUE CU B 601
20CC2SOFTWAREHIS B:141 , HIS B:437 , HIS B:503 , HOH B:592BINDING SITE FOR RESIDUE CU B 602
21CC3SOFTWAREHIS B:96 , TRP B:137 , HIS B:139 , HIS B:505 , HOH B:592BINDING SITE FOR RESIDUE CU B 603
22CC4SOFTWAREHIS B:94 , HIS B:435 , HIS B:437 , HOH B:611BINDING SITE FOR RESIDUE CU B 604
23CC5SOFTWAREGLU B:43 , THR B:88 , ASN B:89 , ASP B:182 , ASN B:555 , PHE B:557 , PRO B:558 , HOH B:634 , NAG B:701BINDING SITE FOR RESIDUE NAG B 700
24CC6SOFTWAREASN B:56 , VAL B:57 , SER B:180 , PHE B:557 , PRO B:558 , HOH B:574 , HOH B:651 , NAG B:700BINDING SITE FOR RESIDUE NAG B 701
25CC7SOFTWARELEU B:168 , VAL B:170 , PHE B:171 , ASN B:202 , TYR B:216 , NAG B:711BINDING SITE FOR RESIDUE NAG B 710
26CC8SOFTWAREARG B:71 , ASP B:167 , GLY B:169 , NAG B:710 , BMA B:712BINDING SITE FOR RESIDUE NAG B 711
27CC9SOFTWARENAG B:711 , MAN B:714BINDING SITE FOR RESIDUE BMA B 712
28DC1SOFTWAREILE B:166 , ASP B:167 , BMA B:712 , MAN B:715BINDING SITE FOR RESIDUE MAN B 714
29DC2SOFTWAREARG B:11 , MAN B:714BINDING SITE FOR RESIDUE MAN B 715
30DC3SOFTWAREGLN B:214 , TRP B:215 , ASN B:217 , ALA B:317 , HOH B:589BINDING SITE FOR RESIDUE NAG B 720
31DC4SOFTWARETRP B:215 , TRP B:288 , ASN B:290 , THR B:292 , PHE B:305 , ALA B:307 , GLN B:323 , LEU B:325 , NAG B:741BINDING SITE FOR RESIDUE NAG B 740
32DC5SOFTWAREPHE B:305 , GLN B:323 , NAG B:740BINDING SITE FOR RESIDUE NAG B 741
33DC6SOFTWAREPRO B:355 , SER B:356 , THR B:358 , LEU B:359 , ASN B:376BINDING SITE FOR RESIDUE NAG B 760
34DC7SOFTWARELYS B:386 , TYR B:391 , ASN B:396 , SER B:398BINDING SITE FOR RESIDUE NAG B 770
35DC8SOFTWAREHIS C:432 , CYS C:504 , ILE C:506 , HIS C:509BINDING SITE FOR RESIDUE CU C 601
36DC9SOFTWAREHIS C:141 , HIS C:437 , HIS C:503 , HOH C:593BINDING SITE FOR RESIDUE CU C 602
37EC1SOFTWAREHIS C:96 , HIS C:139 , HIS C:505 , HOH C:593 , CU C:604BINDING SITE FOR RESIDUE CU C 603
38EC2SOFTWAREHIS C:94 , HIS C:96 , HIS C:435 , HIS C:437 , CU C:603BINDING SITE FOR RESIDUE CU C 604
39EC3SOFTWARETHR C:88 , ASN C:89 , ASP C:182 , ASN C:555 , PHE C:557 , HOH C:630 , HOH C:696 , NAG C:701BINDING SITE FOR RESIDUE NAG C 700
40EC4SOFTWAREASN C:56 , VAL C:57 , SER C:180 , ASP C:182 , PHE C:557 , HOH C:569 , HOH C:599 , HOH C:688 , NAG C:700BINDING SITE FOR RESIDUE NAG C 701
41EC5SOFTWARELEU C:168 , GLY C:169 , VAL C:170 , PHE C:171 , ASN C:202 , TYR C:216 , NAG C:711BINDING SITE FOR RESIDUE NAG C 710
42EC6SOFTWAREARG C:71 , ASP C:167 , LEU C:168 , GLY C:169 , NAG C:710 , BMA C:712BINDING SITE FOR RESIDUE NAG C 711
43EC7SOFTWAREARG C:71 , NAG C:711BINDING SITE FOR RESIDUE BMA C 712
44EC8SOFTWAREASN C:247 , HOH C:673 , HOH C:695BINDING SITE FOR RESIDUE NAG C 730
45EC9SOFTWARETRP C:288 , ASN C:290 , PHE C:305 , ALA C:307 , GLN C:323 , LEU C:325 , HOH C:590 , NAG C:741BINDING SITE FOR RESIDUE NAG C 740
46FC1SOFTWARETRP C:288 , PHE C:305 , GLN C:323 , NAG C:740BINDING SITE FOR RESIDUE NAG C 741
47FC2SOFTWAREVAL A:284 , PRO C:355 , ASN C:376 , VAL C:406 , NAG C:761BINDING SITE FOR RESIDUE NAG C 760
48FC3SOFTWARETHR A:321 , PRO C:355 , NAG C:760BINDING SITE FOR RESIDUE NAG C 761
49FC4SOFTWAREHIS D:432 , CYS D:504 , HIS D:509BINDING SITE FOR RESIDUE CU D 601
50FC5SOFTWAREHIS D:141 , HIS D:437 , HIS D:503 , HOH D:697BINDING SITE FOR RESIDUE CU D 602
51FC6SOFTWAREHIS D:96 , HIS D:139 , HIS D:505 , CU D:604 , HOH D:697BINDING SITE FOR RESIDUE CU D 603
52FC7SOFTWAREHIS D:94 , HIS D:96 , HIS D:435 , HIS D:437 , CU D:603 , HOH D:643BINDING SITE FOR RESIDUE CU D 604
53FC8SOFTWARETHR D:88 , ASN D:89 , ASP D:182 , ASN D:555 , PHE D:557 , PRO D:558 , HOH D:586 , NAG D:701BINDING SITE FOR RESIDUE NAG D 700
54FC9SOFTWAREASN D:56 , VAL D:57 , SER D:180 , ASP D:182 , PHE D:557 , HOH D:586 , HOH D:631 , NAG D:700 , BMA D:702BINDING SITE FOR RESIDUE NAG D 701
55GC1SOFTWAREHOH D:695 , NAG D:701BINDING SITE FOR RESIDUE BMA D 702
56GC2SOFTWARELEU D:168 , VAL D:170 , PHE D:171 , ASN D:202 , TYR D:216 , VAL D:218 , HOH D:641 , NAG D:711BINDING SITE FOR RESIDUE NAG D 710
57GC3SOFTWAREARG D:71 , LEU D:168 , GLY D:169 , HOH D:609 , HOH D:641 , NAG D:710 , BMA D:712BINDING SITE FOR RESIDUE NAG D 711
58GC4SOFTWARENAG D:711 , MAN D:714BINDING SITE FOR RESIDUE BMA D 712
59GC5SOFTWAREBMA D:712 , MAN D:715BINDING SITE FOR RESIDUE MAN D 714
60GC6SOFTWAREASN D:6 , ARG D:11 , MAN D:714BINDING SITE FOR RESIDUE MAN D 715
61GC7SOFTWAREGLN D:214 , TRP D:215 , ASN D:217 , HOH D:608 , HOH D:693BINDING SITE FOR RESIDUE NAG D 720
62GC8SOFTWARETRP D:288 , ASN D:290 , PHE D:305 , GLN D:323 , LEU D:325 , NAG D:741BINDING SITE FOR RESIDUE NAG D 740
63GC9SOFTWAREGLN D:323 , NAG D:740BINDING SITE FOR RESIDUE NAG D 741

(-) SS Bonds  (12, 12)

Asymmetric Unit
No.Residues
1A:5 -A:13
2A:115 -A:545
3A:298 -A:332
4B:5 -B:13
5B:115 -B:545
6B:298 -B:332
7C:5 -C:13
8C:115 -C:545
9C:298 -C:332
10D:5 -D:13
11D:115 -D:545
12D:298 -D:332

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Thr A:368 -Pro A:369
2Thr B:368 -Pro B:369
3Thr C:368 -Pro C:369
4Thr D:368 -Pro D:369

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3PPS)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3PPS)

(-) Exons   (0, 0)

(no "Exon" information available for 3PPS)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:564
 aligned with F6N9E7_9PEZI | F6N9E7 from UniProtKB/TrEMBL  Length:604

    Alignment length:564
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600    
         F6N9E7_9PEZI    41 SGPTCNTPSNRACWTNGFDINTDYEVSTPNTGRTVAYQLTLTEKENWIGPDGVLKNVVMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPIPPKGGRKTYKFRATQYGTSWYHSHFSAQYGNGVVGTIQIDGPASLPYDIDLGVFPLMDYYYRSADELVHFTQSNGAPPSDNVLFNGTARHPETGAGQWYNVTLTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANSPVGNYWFNVTFGDGLCGSSNNKFPAAIFRYQGAPATLPTDQGLPVPNHMCLDNLNLTPVVTRSAPVNNFVKRPSNTLGVTLDIGGTPLFVWKVNGSAINVDWGKPILDYVMSGNTSYPVSDNIVQVDAVDQWTYWLIENDPTNPIVSLPHPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWLLLAFKTDNPGAWLFHCHIAWHVSGGLSVDFLERPNDLRTQLNSNAKRADRDDFNRVCREWNAYWPTNPFPKIDSGL 604
               SCOP domains d3ppsa1 A:1-163 automated matches                                                                                                                                  d3ppsa2 A:164-343 automated matches                                                                                                                                                 d3ppsa3 A:344-564 automated matches                                                                                                                                                                                           SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............eee..ee..............eeeeeeeeeeeeeee.....eeeeeeee.......eeeee...eeeeeeee........eeee......hhhhh..............eeeeeeee....eeeeeee...hhhhhh.eeeeeee........eeeeeeeeeee...hhhhhhhhhh........eeee...............eeee....eeeeeeee......eeeee....eeeeee..eeeeeeee.eeee....eeeeeee......eeeeeee..hhhhh.......eeeeee.........................................hhh.eeeeeeee.....eeeee...........hhhhhhh......hhhh.eeee.....eeeeeeee..........eeeee....eeeeee....hhhhh.....hhhhhh.........ee.eeee....eeeeeee....eeeeeee.hhhhhhhh.eeeeeehhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3pps A   1 SGPTCNTPSNRACWTNGFDINTDYEVSTPNTGRTVAYQLTLTEKENWIGPDGVLKNVVMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPIPPKGGRKTYKFRATQYGTSWYHSHFSAQYGNGVVGTIQIDGPASLPYDIDLGVFPLMDYYYRSADELVHFTQSNGAPPSDNVLFNGTARHPETGAGQWYNVTLTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANSPVGNYWFNVTFGDGLCGSSNNKFPAAIFRYQGAPATLPTDQGLPVPNHMCLDNLNLTPVVTRSAPVNNFVKRPSNTLGVTLDIGGTPLFVWKVNGSAINVDWGKPILDYVMSGNTSYPVSDNIVQVDAVDQWTYWLIENDPTNPIVSLPHPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWLLLAFKTDNPGAWLFHCHIAWHVSGGLSVDFLERPNDLRTQLNSNAKRADRDDFNRVCREWNAYWPTNPFPKIDSGL 564
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560    


Chain B from PDB  Type:PROTEIN  Length:564
 aligned with F6N9E7_9PEZI | F6N9E7 from UniProtKB/TrEMBL  Length:604

    Alignment length:564
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600    
         F6N9E7_9PEZI    41 SGPTCNTPSNRACWTNGFDINTDYEVSTPNTGRTVAYQLTLTEKENWIGPDGVLKNVVMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPIPPKGGRKTYKFRATQYGTSWYHSHFSAQYGNGVVGTIQIDGPASLPYDIDLGVFPLMDYYYRSADELVHFTQSNGAPPSDNVLFNGTARHPETGAGQWYNVTLTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANSPVGNYWFNVTFGDGLCGSSNNKFPAAIFRYQGAPATLPTDQGLPVPNHMCLDNLNLTPVVTRSAPVNNFVKRPSNTLGVTLDIGGTPLFVWKVNGSAINVDWGKPILDYVMSGNTSYPVSDNIVQVDAVDQWTYWLIENDPTNPIVSLPHPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWLLLAFKTDNPGAWLFHCHIAWHVSGGLSVDFLERPNDLRTQLNSNAKRADRDDFNRVCREWNAYWPTNPFPKIDSGL 604
               SCOP domains d3ppsb1 B:1-163 automated matches                                                                                                                                  d3ppsb2 B:164-343 automated matches                                                                                                                                                 d3ppsb3 B:344-564 automated matches                                                                                                                                                                                           SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............eee..ee..............eeeeeeeeeeeeeee.....eeeeeeee.......eeeee...eeeeeeeee.......eeee......hhhhh..............eeeeeeee....eeeeeee...hhhhhh.eeeeeee........eeeeeeeeeee...hhhhhhhhhh........eeee...............eeee....eeeeeeee......eeeee....eeeeee.......eee..eee....eeeeeee......eeeeeee..hhhhh.......eeeeee.............................................eeeeeeee.....eeeee...........hhhhhhhh.....hhhh.eeee.....eeeeeeee..........eeeee....eeeeee....hhhhh.....hhhhhhhhh......ee.eeee....eeeeeee....eeeeeee.hhhhhhh..eeeeeehhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3pps B   1 SGPTCNTPSNRACWTNGFDINTDYEVSTPNTGRTVAYQLTLTEKENWIGPDGVLKNVVMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPIPPKGGRKTYKFRATQYGTSWYHSHFSAQYGNGVVGTIQIDGPASLPYDIDLGVFPLMDYYYRSADELVHFTQSNGAPPSDNVLFNGTARHPETGAGQWYNVTLTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANSPVGNYWFNVTFGDGLCGSSNNKFPAAIFRYQGAPATLPTDQGLPVPNHMCLDNLNLTPVVTRSAPVNNFVKRPSNTLGVTLDIGGTPLFVWKVNGSAINVDWGKPILDYVMSGNTSYPVSDNIVQVDAVDQWTYWLIENDPTNPIVSLPHPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWLLLAFKTDNPGAWLFHCHIAWHVSGGLSVDFLERPNDLRTQLNSNAKRADRDDFNRVCREWNAYWPTNPFPKIDSGL 564
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560    


Chain C from PDB  Type:PROTEIN  Length:564
 aligned with F6N9E7_9PEZI | F6N9E7 from UniProtKB/TrEMBL  Length:604

    Alignment length:564
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600    
         F6N9E7_9PEZI    41 SGPTCNTPSNRACWTNGFDINTDYEVSTPNTGRTVAYQLTLTEKENWIGPDGVLKNVVMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPIPPKGGRKTYKFRATQYGTSWYHSHFSAQYGNGVVGTIQIDGPASLPYDIDLGVFPLMDYYYRSADELVHFTQSNGAPPSDNVLFNGTARHPETGAGQWYNVTLTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANSPVGNYWFNVTFGDGLCGSSNNKFPAAIFRYQGAPATLPTDQGLPVPNHMCLDNLNLTPVVTRSAPVNNFVKRPSNTLGVTLDIGGTPLFVWKVNGSAINVDWGKPILDYVMSGNTSYPVSDNIVQVDAVDQWTYWLIENDPTNPIVSLPHPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWLLLAFKTDNPGAWLFHCHIAWHVSGGLSVDFLERPNDLRTQLNSNAKRADRDDFNRVCREWNAYWPTNPFPKIDSGL 604
               SCOP domains d3ppsc1 C:1-163 automated matches                                                                                                                                  d3ppsc2 C:164-343 automated matches                                                                                                                                                 d3ppsc3 C:344-564 automated matches                                                                                                                                                                                           SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............eee..ee..............eeeeeeeeeeeeeee.....eeeeeeee.......eeeee...eeeeeeeee.......eeee......hhhhh..............eeeeeeee....eeeeeee...hhhhhh.eeeeeee........eeeeeeeeeee...hhhhhhhhhh........eeee...............eeee....eeeeeeee......eeeee....eeeeee.......eee..eee....eeeeeee......eeeeeee..hhhhh.......eeeeee.............................................eeeeeeee.....eeeee...........hhhhhhhh.....hhhh.eeee.....eeeeeeee..........eeeee....eeeeee....hhhhh.....hhhhhh.........ee.eeee....eeeeeee....eeeeeee.hhhhhhh..eeeeeehhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3pps C   1 SGPTCNTPSNRACWTNGFDINTDYEVSTPNTGRTVAYQLTLTEKENWIGPDGVLKNVVMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPIPPKGGRKTYKFRATQYGTSWYHSHFSAQYGNGVVGTIQIDGPASLPYDIDLGVFPLMDYYYRSADELVHFTQSNGAPPSDNVLFNGTARHPETGAGQWYNVTLTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANSPVGNYWFNVTFGDGLCGSSNNKFPAAIFRYQGAPATLPTDQGLPVPNHMCLDNLNLTPVVTRSAPVNNFVKRPSNTLGVTLDIGGTPLFVWKVNGSAINVDWGKPILDYVMSGNTSYPVSDNIVQVDAVDQWTYWLIENDPTNPIVSLPHPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWLLLAFKTDNPGAWLFHCHIAWHVSGGLSVDFLERPNDLRTQLNSNAKRADRDDFNRVCREWNAYWPTNPFPKIDSGL 564
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560    


Chain D from PDB  Type:PROTEIN  Length:564
 aligned with F6N9E7_9PEZI | F6N9E7 from UniProtKB/TrEMBL  Length:604

    Alignment length:564
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600    
         F6N9E7_9PEZI    41 SGPTCNTPSNRACWTNGFDINTDYEVSTPNTGRTVAYQLTLTEKENWIGPDGVLKNVVMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPIPPKGGRKTYKFRATQYGTSWYHSHFSAQYGNGVVGTIQIDGPASLPYDIDLGVFPLMDYYYRSADELVHFTQSNGAPPSDNVLFNGTARHPETGAGQWYNVTLTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANSPVGNYWFNVTFGDGLCGSSNNKFPAAIFRYQGAPATLPTDQGLPVPNHMCLDNLNLTPVVTRSAPVNNFVKRPSNTLGVTLDIGGTPLFVWKVNGSAINVDWGKPILDYVMSGNTSYPVSDNIVQVDAVDQWTYWLIENDPTNPIVSLPHPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWLLLAFKTDNPGAWLFHCHIAWHVSGGLSVDFLERPNDLRTQLNSNAKRADRDDFNRVCREWNAYWPTNPFPKIDSGL 604
               SCOP domains d3ppsd1 D:1-163 automated matches                                                                                                                                  d3ppsd2 D:164-343 automated matches                                                                                                                                                 d3ppsd3 D:344-564 automated matches                                                                                                                                                                                           SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............eee..ee..............eeeeeeeeeeeeeee.....eeeeeeee.......eeeee...eeeeeeee........eeee......hhhhh..............eeeeeeee....eeeeeee...hhhhhh.eeeeeee........eeeeeeeeeee...hhhhhhhhhh........eeee...............eeee....eeeeeeee......eeeee....eeeeee..eeeeeeee.eeee....eeeeeee......eeeeeee..hhhhh.......eeeeee.........................................hhh.eeeeeeee.....eeeee...........hhhhhhh......hhhh.eeee.....eeeeeeee..........eeeee....eeeeee....hhhhh.....hhhhhh.........ee.eeee....eeeeeee....eeeeeee.hhhhhhhh.eeeeeehhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3pps D   1 SGPTCNTPSNRACWTNGFDINTDYEVSTPNTGRTVAYQLTLTEKENWIGPDGVLKNVVMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPIPPKGGRKTYKFRATQYGTSWYHSHFSAQYGNGVVGTIQIDGPASLPYDIDLGVFPLMDYYYRSADELVHFTQSNGAPPSDNVLFNGTARHPETGAGQWYNVTLTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANSPVGNYWFNVTFGDGLCGSSNNKFPAAIFRYQGAPATLPTDQGLPVPNHMCLDNLNLTPVVTRSAPVNNFVKRPSNTLGVTLDIGGTPLFVWKVNGSAINVDWGKPILDYVMSGNTSYPVSDNIVQVDAVDQWTYWLIENDPTNPIVSLPHPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWLLLAFKTDNPGAWLFHCHIAWHVSGGLSVDFLERPNDLRTQLNSNAKRADRDDFNRVCREWNAYWPTNPFPKIDSGL 564
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 12)

Asymmetric Unit
(-)
Class: All beta proteins (24004)
(-)
Fold: Cupredoxin-like (545)
(-)
Superfamily: Cupredoxins (543)
(-)
Family: automated matches (57)
(-)
Protein domain: automated matches (57)
(-)
Thielavia arenaria [TaxId: 113610] (1)
1ad3ppsa1A:1-163
1bd3ppsa2A:164-343
1cd3ppsd2D:164-343
1dd3ppsd3D:344-564
1ed3ppsa3A:344-564
1fd3ppsb1B:1-163
1gd3ppsb2B:164-343
1hd3ppsb3B:344-564
1id3ppsc1C:1-163
1jd3ppsc2C:164-343
1kd3ppsc3C:344-564
1ld3ppsd1D:1-163

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3PPS)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3PPS)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (F6N9E7_9PEZI | F6N9E7)
molecular function
    GO:0005507    copper ion binding    Interacting selectively and non-covalently with copper (Cu) ions.
    GO:0052716    hydroquinone:oxygen oxidoreductase activity    Catalysis of the reaction: 4 hydroquinone + O2 = 4 benzosemiquinone + 4 H2O.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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  3pps
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 3PPS)

(-) Related Entries Specified in the PDB File

1gw0 NATIVE MELANOCARPUS ALBOMYSES (ASCOMYCETE) LACCASE
2ih8 A LOW-DOSE CRYSTAL STRUCTURE OF A RECOMBINANT MELANOCARPUS ALBOMYCES LACCASE
2ih9 A HIGH-DOSE CRYSTAL STRUCTURE OF A RECOMBINANT MELANOCARPUS ALBOMYCES LACCASE
2q9o A NEAR-ATOMIC RMAL STRUCTURE
3dkh L559A MUTANT OF MAL
3fu7 RMAL COMPLEX WITH PHENOLIC SUBSTRATE
3fu8 RMAL COMPLEX WITH PHENOLIC SUBSTRATE
3fu9 RMAL COMPLEX WITH PHENOLIC SUBSTRATE