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(-) Description

Title :  ATOMIC STRUCTURE OF THE XANTHOMONAS CITRI VIRB7 GLOBULAR DOMAIN.
 
Authors :  D. P. Souza, C. S. Farah
Date :  15 Sep 10  (Deposition) - 01 Jun 11  (Release) - 01 Jun 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.04
Chains :  Asym./Biol. Unit :  A
Keywords :  Type Iv Secretion System Component, Virb7 (Xac2622), Bacterial Outer Membrane, Xanthomonas Axonopodis Pv Citri, Protein Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. P. Souza, M. O. Andrade, C. E. Alvarez-Martinez, G. M. Arantes, C. S. Farah, R. K. Salinas
A Component Of The Xanthomonadaceae Type Iv Secretion Syste Combines A Virb7 Motif With A N0 Domain Found In Outer Membrane Transport Proteins.
Plos Pathog. V. 7 E1002 2011
PubMed-ID: 21589901  |  Reference-DOI: 10.1371/JOURNAL.PPAT.1002031

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET-11A
    Expression System Strain: BL21(DE3)RP
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: GLOBULAR DOMAIN, RESIDUES 51-134
    Gene: XAC2622
    Organism Common: CITRUS CANKER
    Organism Scientific: XANTHOMONAS AXONOPODIS PV. CITRI
    Organism Taxid: 190486
    Strain: 306
    Synonym: VIRB7 (XAC2622)

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1IPA1Ligand/IonISOPROPYL ALCOHOL

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHOH A:11 , HOH A:37 , LYS A:65 , THR A:99BINDING SITE FOR RESIDUE IPA A 1

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric/Biological Unit
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Chain A from PDB  Type:PROTEIN  Length:84
 aligned with Q8PJB3_XANAC | Q8PJB3 from UniProtKB/TrEMBL  Length:139

    Alignment length:84
                                    60        70        80        90       100       110       120       130    
         Q8PJB3_XANAC    51 TSYTYQATPMDGTLKTMLERWAADSNMQLSYNLPSDYTLIGPVSAISTTSVQQAATELSAVYAAQGVSVSVSANKLLVQPVPVS 134
               SCOP domains ------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....ee......hhhhhhhhhhhh...eeee........hhhhhh.ee.hhhhhhhhhhhhhh...eeeeee..eeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------ Transcript
                 3ov5 A  51 TSYTYQATPMDGTLKTMLERWAADSNMQLSYNLPSDYTLIGPVSAISTTSVQQAATELSAVYAAQGVSVSVSANKLLVQPVPVS 134
                                    60        70        80        90       100       110       120       130
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(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (0, 0)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8PJB3_XANAC | Q8PJB3: 2l4w 2n01

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