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(-) Description

Title :  NMR STRUCTURE OF VIRB9 C-TERMINAL DOMAIN IN COMPLEX WITH VIRB7 N-TERMINAL DOMAIN FROM XANTHOMONAS CITRI'S T4SS
 
Authors :  L. C. Oliveira, D. P. Souza, R. K. Salinas, H. Wienk, R. Boelens, S. C. Far
Date :  03 Mar 15  (Deposition) - 09 Sep 15  (Release) - 19 Oct 16  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B  (20x)
NMR Structure *:  A,B  (1x)
Keywords :  T4Ss, Lipoprotein, Protein-Peptide Complex, Virb9, Virb7, Protein Transport-Protein Transport Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. C. Oliveira, D. P. Souza, G. U. Oka, F. D. Lima, R. J. Oliveira, D. C. Favaro, H. Wienk, R. Boelens, C. S. Farah, R. K. Salinas
Virb7 And Virb9 Interactions Are Required For The Assembly And Antibacterial Activity Of A Type Iv Secretion System.
Structure V. 24 1707 2016
PubMed-ID: 27594685  |  Reference-DOI: 10.1016/J.STR.2016.07.015

(-) Compounds

Molecule 1 - VIRB7 PROTEIN
    Chains: A
    Engineered: YES
    Fragment: N-TERMINAL DOMAIN (UNP RESIDUES 24-46)
    Organism Scientific: XANTHOMONAS AXONOPODIS PV. CITRI
    Organism Taxid: 190486
    Synthetic: YES
 
Molecule 2 - VIRB9 PROTEIN
    Chains: B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Fragment: C-TERMINAL DOMAIN (UNP RESIDUES 154-255)
    Gene: VIRB9, XAC2620, XAC2622
    Organism Scientific: XANTHOMONAS AXONOPODIS PV. CITRI
    Organism Taxid: 190486
    Strain: 306

 Structural Features

(-) Chains, Units

  12
NMR Structure (20x): AB
NMR Structure * (1x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2N01)

(-) Sites  (0, 0)

(no "Site" information available for 2N01)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2N01)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2N01)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2N01)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2N01)

(-) Exons   (0, 0)

(no "Exon" information available for 2N01)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:23
                                                       
               SCOP domains ----------------------- SCOP domains
               CATH domains ----------------------- CATH domains
               Pfam domains ----------------------- Pfam domains
         Sec.struct. author ...........ee.......... Sec.struct. author
                 SAPs(SNPs) ----------------------- SAPs(SNPs)
                    PROSITE ----------------------- PROSITE
                 Transcript ----------------------- Transcript
                 2n01 A  24 TKPAPDFGGRWKHVNHFDEAPTE  46
                                    33        43   


Chain B from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............ee..eeeee..........eeeee..eeeee.hhhhh......eeeee..........eeeee..eeeee....eeeeee..eeeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 2n01 B 150 GSHMNAKILKDRRYYYDYDYATRTKKSWLIPSRVYDDGKFTYINMDLTRFPTGNFPAVFAREKEHAEDFLVNTTVEGNTLIVHGTYPFLVVRHGDNVVGLRRNKQK 255
                                   159       169       179       189       199       209       219       229       239       249
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2N01)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2N01)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2N01)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8PJB3_XANAC | Q8PJB3: 2l4w 3ov5

(-) Related Entries Specified in the PDB File

2l4w NMR STRUCTURE OF VIRB7 FROM XANTHOMONAS CITRI RELATED ID: 25512 RELATED DB: BMRB