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(-) Description

Title :  NMR STRUCTURE OF THE XANTHOMONAS VIRB7
 
Authors :  D. P. Souza, C. S. Farah, R. K. Salinas
Date :  15 Oct 10  (Deposition) - 01 Jun 11  (Release) - 01 Jun 11  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Type Iv Secretion System, Virb7, N0 Domain, Membrane Protein, Xanthomonas, Lipoprotein, Bacterial Outer Membrane, Protein Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. P. Souza, M. O. Andrade, C. E. Alvarez-Martinez, G. M. Arantes, C. S. Farah, R. K. Salinas
A Component Of The Xanthomonadaceae Type Iv Secretion Syste Combines A Virb7 Motif With A N0 Domain Found In Outer Membrane Transport Proteins.
Plos Pathog. V. 7 E1002 2011
PubMed-ID: 21589901  |  Reference-DOI: 10.1371/JOURNAL.PPAT.1002031

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)RP
    Expression System Taxid: 469008
    Expression System Vector: PET28A
    Fragment: VIRB7-XAC2622, UNP RESIDUES 24-139
    Gene: XAC2622
    Organism Common: CITRUS CANKER
    Organism Scientific: XANTHOMONAS AXONOPODIS PV. CITRI
    Organism Taxid: 190486
    Strain: 306

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2L4W)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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Chain A from PDB  Type:PROTEIN  Length:120
 aligned with Q8PJB3_XANAC | Q8PJB3 from UniProtKB/TrEMBL  Length:139

    Alignment length:120
                                    29        39        49        59        69        79        89        99       109       119       129       139
         Q8PJB3_XANAC    20 GACATKPAPDFGGRWKHVNHFDEAPTEIPLYTSYTYQATPMDGTLKTMLERWAADSNMQLSYNLPSDYTLIGPVSAISTTSVQQAATELSAVYAAQGVSVSVSANKLLVQPVPVSSGAKL 139
               SCOP domains ------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ----------------------TcpQ-2l4wA01 A:42-135                                                                         ---- Pfam domains
         Sec.struct. author ...........................................hhhhhhhhhhhhh..eeee..................hhhhhhhhhhhhhh...eeeee...eeeeee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------ Transcript
                 2l4w A  20 GSHMTKPAPDFGGRWKHVNHFDEAPTEIPLYTSYTYQATPMDGTLKTMLERWAADSNMQLSYNLPSDYTLIGPVSAISTTSVQQAATELSAVYAAQGVSVSVSANKLLVQPVPVSSGAKL 139
                                    29        39        49        59        69        79        89        99       109       119       129       139
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2L4W)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2L4W)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: no clan defined [family: TcpQ] (1)

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NMR Structure(hide GO term definitions)
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8PJB3_XANAC | Q8PJB3: 2n01 3ov5

(-) Related Entries Specified in the PDB File

3ov5 ENTRY CONTAINING THE X-RAY CRYSTAL STRUCTURE FOR THE XAC2622 GLOBULAR DOMAIN RELATED ID: 17257 RELATED DB: BMRB