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(-) Description

Title :  CRYSTAL STRUCTURE OF A BOL-LIKE PROTEIN FROM BABESIA BOVIS
 
Authors :  Seattle Structural Genomics Center For Infectious Disease (S
Date :  22 Jul 10  (Deposition) - 13 Oct 10  (Release) - 20 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.95
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (2x)
Keywords :  Ssgcid, Babesia Bovis, Iodide, Sad, Seattle Structural Genomics Center For Infectious Disease, Bol Like Protein, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Abendroth, A. S. Gardberg, J. I. Robinson, J. S. Christensen, B. L. Staker, P. J. Myler, L. J. Stewart, T. E. Edwards
Sad Phasing Using Iodide Ions In A High-Throughput Structural Genomics Environment.
J. Struct. Funct. Genom. V. 12 83 2011
PubMed-ID: 21359836  |  Reference-DOI: 10.1007/S10969-011-9101-7

(-) Compounds

Molecule 1 - BOLA-LIKE PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: AVA0421
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Scientific: BABESIA BOVIS
    Organism Taxid: 484906
    Strain: T2BO

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (1x): A
Biological Unit 2 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 10)

Asymmetric Unit (2, 10)
No.NameCountTypeFull Name
1IOD9Ligand/IonIODIDE ION
2MG1Ligand/IonMAGNESIUM ION
Biological Unit 1 (1, 9)
No.NameCountTypeFull Name
1IOD9Ligand/IonIODIDE ION
2MG-1Ligand/IonMAGNESIUM ION
Biological Unit 2 (1, 18)
No.NameCountTypeFull Name
1IOD18Ligand/IonIODIDE ION
2MG-1Ligand/IonMAGNESIUM ION

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01AC1SOFTWARECYS A:72BINDING SITE FOR RESIDUE IOD A 87
02AC2SOFTWARESER A:5BINDING SITE FOR RESIDUE IOD A 88
03AC3SOFTWAREGLY A:-1 , GLY A:44 , ARG A:50BINDING SITE FOR RESIDUE IOD A 89
04AC4SOFTWAREASP A:24 , HOH A:129BINDING SITE FOR RESIDUE IOD A 90
05AC5SOFTWARETHR A:69 , HOH A:137BINDING SITE FOR RESIDUE IOD A 91
06AC6SOFTWAREASP A:49BINDING SITE FOR RESIDUE IOD A 92
07AC7SOFTWARETHR A:69 , MET A:70BINDING SITE FOR RESIDUE IOD A 93
08AC8SOFTWAREHOH A:128BINDING SITE FOR RESIDUE IOD A 94
09AC9SOFTWARELEU A:47 , HOH A:106BINDING SITE FOR RESIDUE IOD A 95
10BC1SOFTWAREILE A:65 , HIS A:66 , HOH A:99BINDING SITE FOR RESIDUE MG A 96

(-) SS Bonds  (1, 1)

Asymmetric Unit
No.Residues
1A:29 -A:29

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3O2E)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:86
 aligned with A7ATL3_BABBO | A7ATL3 from UniProtKB/TrEMBL  Length:86

    Alignment length:86
                               1                                                                                  
                               |     7        17        27        37        47        57        67        77      
          A7ATL3_BABBO    - ---MVSKSIVEERLRSMLSPQFLKVTDNSGGCGAAFNAYIVSQQFEGKGLLDRQRLVNSAIAAEMPQIHAFTMKCLTPGEWEAKNR 83
               SCOP domains -------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------- CATH domains
               Pfam domains -----------BolA-3o2eA01 A:9-78                                                   ----- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhh..eeeeee......eeeeeeee.hhhh..hhhhhhhhhhhhh..hhh.eeeeeeeeehhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------- Transcript
                  3o2e A -2 PGSMVSKSIVEERLRSMLSPQFLKVTDNSGGCGAAFNAYIVSQQFEGKGLLDRQRLVNSAIAAEMPQIHAFTMKCLTPGEWEAKNR 83
                                     7        17        27        37        47        57        67        77
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3O2E)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3O2E)

(-) Pfam Domains  (1, 1)

Asymmetric Unit
(-)
Clan: no clan defined [family: BolA] (5)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
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(-) Related Entries Specified in the PDB File

3k9g 3km3 3kw3 3luz 3men 3njb 3oib 3p96 3pfd 3pm6