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(-) Description

Title :  CRYSTAL STRUCTURE OF E. COLI O157:H7 EFFECTOR PROTEIN NLEL
 
Authors :  D. Y. Lin, J. Chen
Date :  02 Jun 10  (Deposition) - 27 Oct 10  (Release) - 19 Jan 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Secreted Effector Protein, Pentapeptide, Hect Domain, Hect E3 Ubiquitin Ligase, Ligase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Y. Lin, J. Diao, D. Zhou, J. Chen
Biochemical And Structural Studies Of A Hect-Like Ubiquitin Ligase From Escherichia Coli O157:H7.
J. Biol. Chem. V. 286 441 2011
PubMed-ID: 20980253  |  Reference-DOI: 10.1074/JBC.M110.167643

(-) Compounds

Molecule 1 - SECRETED EFFECTOR PROTEIN
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG20
    Expression System Strain: BL21 (DE3) RIL
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 171-782
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 83334
    Strain: O157:H7

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 52)

Asymmetric Unit (4, 52)
No.NameCountTypeFull Name
1DTT2Ligand/Ion2,3-DIHYDROXY-1,4-DITHIOBUTANE
2GOL29Ligand/IonGLYCEROL
3MES5Ligand/Ion2-(N-MORPHOLINO)-ETHANESULFONIC ACID
4SO416Ligand/IonSULFATE ION
Biological Unit 1 (4, 19)
No.NameCountTypeFull Name
1DTT1Ligand/Ion2,3-DIHYDROXY-1,4-DITHIOBUTANE
2GOL13Ligand/IonGLYCEROL
3MES1Ligand/Ion2-(N-MORPHOLINO)-ETHANESULFONIC ACID
4SO44Ligand/IonSULFATE ION
Biological Unit 2 (2, 7)
No.NameCountTypeFull Name
1DTT-1Ligand/Ion2,3-DIHYDROXY-1,4-DITHIOBUTANE
2GOL4Ligand/IonGLYCEROL
3MES-1Ligand/Ion2-(N-MORPHOLINO)-ETHANESULFONIC ACID
4SO43Ligand/IonSULFATE ION
Biological Unit 3 (4, 15)
No.NameCountTypeFull Name
1DTT1Ligand/Ion2,3-DIHYDROXY-1,4-DITHIOBUTANE
2GOL7Ligand/IonGLYCEROL
3MES2Ligand/Ion2-(N-MORPHOLINO)-ETHANESULFONIC ACID
4SO45Ligand/IonSULFATE ION
Biological Unit 4 (3, 11)
No.NameCountTypeFull Name
1DTT-1Ligand/Ion2,3-DIHYDROXY-1,4-DITHIOBUTANE
2GOL5Ligand/IonGLYCEROL
3MES2Ligand/Ion2-(N-MORPHOLINO)-ETHANESULFONIC ACID
4SO44Ligand/IonSULFATE ION

(-) Sites  (52, 52)

Asymmetric Unit (52, 52)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGOL A:2 , PHE A:440 , MET A:446 , TYR C:401 , TRP C:439BINDING SITE FOR RESIDUE GOL A 1
02AC2SOFTWAREGOL A:1 , TYR A:401 , DTT A:785 , MET C:446BINDING SITE FOR RESIDUE GOL A 2
03AC3SOFTWAREGOL A:19 , HOH A:49 , ASN A:356 , TYR A:357 , HOH A:789 , TYR C:357BINDING SITE FOR RESIDUE GOL A 4
04AC4SOFTWAREPHE A:607 , GLY A:610 , ILE A:611 , HOH A:909 , SER B:511 , HOH B:938BINDING SITE FOR RESIDUE GOL A 7
05AC5SOFTWAREILE A:412 , HIS A:413 , ASN A:450 , HOH A:857 , HOH A:900 , HOH A:1054BINDING SITE FOR RESIDUE GOL A 12
06AC6SOFTWAREHIS A:552 , ASN A:564 , HOH A:906 , ASN B:564BINDING SITE FOR RESIDUE GOL A 13
07AC7SOFTWAREASP A:613 , ILE A:614 , LEU A:615 , SER A:617 , HOH A:934 , ASP B:517 , GLY B:518 , HOH B:1130BINDING SITE FOR RESIDUE GOL A 14
08AC8SOFTWARESER A:443 , ILE A:444 , HOH A:824 , HOH A:1071 , THR C:435 , TRP C:439BINDING SITE FOR RESIDUE GOL A 15
09AC9SOFTWAREPHE A:769 , PRO A:770 , GLU A:771 , ILE A:772BINDING SITE FOR RESIDUE GOL A 16
10BC1SOFTWAREGLY A:321 , ASP A:322 , VAL A:323 , LYS A:374 , TYR A:375 , ASP A:378BINDING SITE FOR RESIDUE GOL A 18
11BC2SOFTWAREGOL A:4 , TYR A:357 , HOH A:988 , HOH C:59 , ASN C:356 , GLU C:449BINDING SITE FOR RESIDUE GOL A 19
12BC3SOFTWARETYR A:724 , VAL A:734 , TYR A:737 , ASN A:738BINDING SITE FOR RESIDUE GOL A 24
13BC4SOFTWAREARG A:782 , HOH A:836 , SER C:469 , TYR C:470BINDING SITE FOR RESIDUE GOL A 25
14BC5SOFTWAREARG A:234 , MET A:235 , ASN A:254 , GLU A:255 , ASP C:372 , ASP C:373 , ASN D:191BINDING SITE FOR RESIDUE MES A 3
15BC6SOFTWAREHIS A:463 , PRO A:464 , GLY A:465 , ALA A:466 , HOH A:855 , ASN C:632 , LYS C:633BINDING SITE FOR RESIDUE SO4 A 5
16BC7SOFTWARELYS A:359 , HOH A:870 , GOL C:22BINDING SITE FOR RESIDUE SO4 A 783
17BC8SOFTWAREGLU A:620 , ARG A:624 , TYR A:636 , LYS A:646 , HOH A:918BINDING SITE FOR RESIDUE SO4 A 784
18BC9SOFTWAREGLY A:486 , MET A:487 , GLN A:488 , GLU A:489BINDING SITE FOR RESIDUE SO4 A 17
19CC1SOFTWAREGOL A:2 , PHE A:398 , THR A:435 , ILE A:436 , TRP A:439 , PHE C:440 , SER C:443 , ILE C:444BINDING SITE FOR RESIDUE DTT A 785
20CC2SOFTWAREASN B:356 , GLU B:449 , HOH B:802 , HOH B:1140BINDING SITE FOR RESIDUE GOL B 3
21CC3SOFTWARETYR B:401 , GOL D:5BINDING SITE FOR RESIDUE GOL B 6
22CC4SOFTWARESER A:511 , ASN B:606 , PHE B:607 , GLY B:610 , ILE B:611 , SER B:671 , HOH B:878BINDING SITE FOR RESIDUE GOL B 8
23CC5SOFTWARETYR B:357 , HOH B:851 , TYR D:357 , GLU D:449 , HOH D:865BINDING SITE FOR RESIDUE GOL B 10
24CC6SOFTWAREGLY B:486 , MET B:487 , GLN B:488 , GLU B:489BINDING SITE FOR RESIDUE SO4 B 783
25CC7SOFTWAREARG B:399 , PRO B:400 , TYR B:401 , VAL B:402BINDING SITE FOR RESIDUE SO4 B 784
26CC8SOFTWARETYR A:532 , MET A:566 , PHE A:568 , PHE A:569 , HIS B:672BINDING SITE FOR RESIDUE SO4 B 12
27CC9SOFTWAREPRO C:297 , ILE C:298 , LEU C:299 , ASN C:300 , VAL C:314 , SER C:316BINDING SITE FOR RESIDUE GOL C 11
28DC1SOFTWAREPHE C:769 , PRO C:770 , GLU C:771 , ILE C:772BINDING SITE FOR RESIDUE GOL C 17
29DC2SOFTWAREHOH C:59 , ASN C:356 , ASN C:369 , SER C:409 , GLU C:449 , HOH C:830BINDING SITE FOR RESIDUE GOL C 20
30DC3SOFTWAREGOL C:22 , TYR C:447 , MET C:448 , ASN C:480 , ARG C:484 , HOH C:805 , HOH C:806 , HOH C:992 , HOH C:1024BINDING SITE FOR RESIDUE GOL C 21
31DC4SOFTWARETHR A:358 , SO4 A:783 , HOH A:871 , GOL C:21 , TYR C:447 , HOH C:807 , HOH C:983BINDING SITE FOR RESIDUE GOL C 22
32DC5SOFTWARESER C:596 , HIS C:600 , SER C:774 , ARG C:782 , HOH C:1048BINDING SITE FOR RESIDUE GOL C 23
33DC6SOFTWARETHR A:435 , ILE C:444 , LEU C:557BINDING SITE FOR RESIDUE GOL C 29
34DC7SOFTWARETYR A:735 , ASN A:738 , ASP A:742 , ARG C:743 , ASN C:749 , PHE C:751 , THR C:752 , VAL C:756BINDING SITE FOR RESIDUE MES C 1
35DC8SOFTWAREASP A:372 , ASP A:373 , ARG C:234 , ASN C:254 , GLU C:255 , HOH C:889BINDING SITE FOR RESIDUE MES C 2
36DC9SOFTWAREGLU C:620 , ARG C:624 , TYR C:636 , HOH C:932BINDING SITE FOR RESIDUE SO4 C 783
37EC1SOFTWAREARG C:624BINDING SITE FOR RESIDUE SO4 C 3
38EC2SOFTWAREGLY C:486 , MET C:487 , GLN C:488 , GLU C:489BINDING SITE FOR RESIDUE SO4 C 7
39EC3SOFTWARESER C:177 , LYS C:178 , HOH C:786 , HOH C:1235BINDING SITE FOR RESIDUE SO4 C 10
40EC4SOFTWAREARG C:399 , PRO C:400 , TYR C:401 , VAL C:402BINDING SITE FOR RESIDUE SO4 C 784
41EC5SOFTWARETYR A:736 , MET A:760 , HIS A:764 , GLU A:767 , HOH C:147 , SER C:733 , TYR C:735 , TYR C:736BINDING SITE FOR RESIDUE DTT C 785
42EC6SOFTWAREGOL B:6 , TYR D:401BINDING SITE FOR RESIDUE GOL D 5
43EC7SOFTWARETYR D:736 , HIS D:764 , HOH D:789BINDING SITE FOR RESIDUE GOL D 9
44EC8SOFTWARELYS B:766 , ARG B:782 , ASP D:434 , TYR D:459 , SER D:469 , TYR D:470BINDING SITE FOR RESIDUE GOL D 26
45EC9SOFTWAREARG D:624 , TYR D:636 , LYS D:646BINDING SITE FOR RESIDUE GOL D 27
46FC1SOFTWARELEU D:366 , ASN D:369 , ASP D:408 , SER D:409BINDING SITE FOR RESIDUE GOL D 28
47FC2SOFTWAREASP B:372 , ASP B:373 , ARG D:234 , ASN D:254 , GLU D:255BINDING SITE FOR RESIDUE MES D 4
48FC3SOFTWAREARG B:234 , ASN B:254 , GLU B:255 , ASP D:372 , ASP D:373 , LYS D:374 , HOH D:830BINDING SITE FOR RESIDUE MES D 783
49FC4SOFTWAREGLY D:486 , MET D:487 , GLN D:488 , GLU D:489BINDING SITE FOR RESIDUE SO4 D 784
50FC5SOFTWAREARG D:399 , PRO D:400 , TYR D:401 , VAL D:402BINDING SITE FOR RESIDUE SO4 D 785
51FC6SOFTWAREHOH B:1145 , PHE D:398 , THR D:435 , TRP D:439 , HOH D:885 , HOH D:908BINDING SITE FOR RESIDUE SO4 D 15
52FC7SOFTWARETRP A:187 , ARG D:234BINDING SITE FOR RESIDUE SO4 D 16

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3NB2)

(-) Cis Peptide Bonds  (5, 5)

Asymmetric Unit
No.Residues
1Gln A:171 -Gly A:172
2His A:413 -Pro A:414
3His B:413 -Pro B:414
4His C:413 -Pro C:414
5His D:413 -Pro D:414

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3NB2)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3NB2)

(-) Exons   (0, 0)

(no "Exon" information available for 3NB2)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:612
 aligned with A0A0H3JDV8_E | A0A0H3JDV8 from UniProtKB/TrEMBL  Length:782

    Alignment length:612
                                   180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780  
         A0A0H3JDV8_E   171 QGRACLSKAELTADLIWLSANRTGEESAEELNYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCIIRALFENSNFSNSNLKNASFKGSSYIQYPPILNEADLTGAIIIPGMVLSGAILGDVKELFSEKSNTINLGGCYIDLSDIQENILSVLDNYTKSNKSILLTMNTSDDKYNHDKVRAAEELIKKISLDELAAFRPYVKMSLADSFSIHPYLNNANIQQWLEPICDDFFDTIMSWFNNSIMMYMENGSLLQAGMYFERHPGAMVSYNSSFIQIVMNGSRRDGMQERFRELYEVYLKNEKVYPVTQQSDFGLCDGSGKPDWDDDSDLAYNWVLLSSQDDGMAMMCSLSHMVDMLSPNTSTNWMSFFLYKDGEVQNTFGYSLSNLFSESFPIFSIPYHKAFSQNFVSGILDILISDNELKERFIEALNSNKSDYKMIADDQQRKLACVWNPFLDGWELNAQHVDMIMGSHVLKDMPLRKQAEILFCLGGVFCKYSSSDMFGTEYDSPEILRRYANGLIEQAYKTDPQVFGSVYYYNDILDRLQGRNNVFTCTAVLTDMLTEHAKESFPEIFSLYYPVAWR 782
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhh.......................................................eeeeee..............eeeee....................................ee.......................eeee..eeee......hhhhhh....hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh...hhhhhh........................eeee......eeeeehhhhhhhhhh..........eeee..ee......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh..........hhhhhhhhhhhhh..ee..eehhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3nb2 A 171 QGRACLSKAELTADLIWLSANRTGEESAEELNYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCIIRALFENSNFSNSNLKNASFKGSSYIQYPPILNEADLTGAIIIPGMVLSGAILGDVKELFSEKSNTINLGGCYIDLSDIQENILSVLDNYTKSNKSILLTMNTSDDKYNHDKVRAAEELIKKISLDELAAFRPYVKMSLADSFSIHPYLNNANIQQWLEPICDDFFDTIMSWFNNSIMMYMENGSLLQAGMYFERHPGAMVSYNSSFIQIVMNGSRRDGMQERFRELYEVYLKNEKVYPVTQQSDFGLCDGSGKPDWDDDSDLAYNWVLLSSQDDGMAMMCSLSHMVDMLSPNTSTNWMSFFLYKDGEVQNTFGYSLSNLFSESFPIFSIPYHKAFSQNFVSGILDILISDNELKERFIEALNSNKSDYKMIADDQQRKLACVWNPFLDGWELNAQHVDMIMGSHVLKDMPLRKQAEILFCLGGVFCKYSSSDMFGTEYDSPEILRRYANGLIEQAYKTDPQVFGSVYYYNDILDRLQGRNNVFTCTAVLTDMLTEHAKESFPEIFSLYYPVAWR 782
                                   180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780  


Chain B from PDB  Type:PROTEIN  Length:612
 aligned with A0A0H3JDV8_E | A0A0H3JDV8 from UniProtKB/TrEMBL  Length:782

    Alignment length:612
                                   180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780  
         A0A0H3JDV8_E   171 QGRACLSKAELTADLIWLSANRTGEESAEELNYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCIIRALFENSNFSNSNLKNASFKGSSYIQYPPILNEADLTGAIIIPGMVLSGAILGDVKELFSEKSNTINLGGCYIDLSDIQENILSVLDNYTKSNKSILLTMNTSDDKYNHDKVRAAEELIKKISLDELAAFRPYVKMSLADSFSIHPYLNNANIQQWLEPICDDFFDTIMSWFNNSIMMYMENGSLLQAGMYFERHPGAMVSYNSSFIQIVMNGSRRDGMQERFRELYEVYLKNEKVYPVTQQSDFGLCDGSGKPDWDDDSDLAYNWVLLSSQDDGMAMMCSLSHMVDMLSPNTSTNWMSFFLYKDGEVQNTFGYSLSNLFSESFPIFSIPYHKAFSQNFVSGILDILISDNELKERFIEALNSNKSDYKMIADDQQRKLACVWNPFLDGWELNAQHVDMIMGSHVLKDMPLRKQAEILFCLGGVFCKYSSSDMFGTEYDSPEILRRYANGLIEQAYKTDPQVFGSVYYYNDILDRLQGRNNVFTCTAVLTDMLTEHAKESFPEIFSLYYPVAWR 782
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhh.....hhhhhh............................................eeeeee..............eeeee....................................ee.......................eeee..eeee......hhhhhh....hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh....hhhhhh........................eeee......eeeeehhhhhhhhhh..........eeee..ee......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh..........hhhhhhhhhhhhh..ee..eehhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3nb2 B 171 QGRACLSKAELTADLIWLSANRTGEESAEELNYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCIIRALFENSNFSNSNLKNASFKGSSYIQYPPILNEADLTGAIIIPGMVLSGAILGDVKELFSEKSNTINLGGCYIDLSDIQENILSVLDNYTKSNKSILLTMNTSDDKYNHDKVRAAEELIKKISLDELAAFRPYVKMSLADSFSIHPYLNNANIQQWLEPICDDFFDTIMSWFNNSIMMYMENGSLLQAGMYFERHPGAMVSYNSSFIQIVMNGSRRDGMQERFRELYEVYLKNEKVYPVTQQSDFGLCDGSGKPDWDDDSDLAYNWVLLSSQDDGMAMMCSLSHMVDMLSPNTSTNWMSFFLYKDGEVQNTFGYSLSNLFSESFPIFSIPYHKAFSQNFVSGILDILISDNELKERFIEALNSNKSDYKMIADDQQRKLACVWNPFLDGWELNAQHVDMIMGSHVLKDMPLRKQAEILFCLGGVFCKYSSSDMFGTEYDSPEILRRYANGLIEQAYKTDPQVFGSVYYYNDILDRLQGRNNVFTCTAVLTDMLTEHAKESFPEIFSLYYPVAWR 782
                                   180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780  


Chain C from PDB  Type:PROTEIN  Length:612
 aligned with A0A0H3JDV8_E | A0A0H3JDV8 from UniProtKB/TrEMBL  Length:782

    Alignment length:612
                                   180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780  
         A0A0H3JDV8_E   171 QGRACLSKAELTADLIWLSANRTGEESAEELNYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCIIRALFENSNFSNSNLKNASFKGSSYIQYPPILNEADLTGAIIIPGMVLSGAILGDVKELFSEKSNTINLGGCYIDLSDIQENILSVLDNYTKSNKSILLTMNTSDDKYNHDKVRAAEELIKKISLDELAAFRPYVKMSLADSFSIHPYLNNANIQQWLEPICDDFFDTIMSWFNNSIMMYMENGSLLQAGMYFERHPGAMVSYNSSFIQIVMNGSRRDGMQERFRELYEVYLKNEKVYPVTQQSDFGLCDGSGKPDWDDDSDLAYNWVLLSSQDDGMAMMCSLSHMVDMLSPNTSTNWMSFFLYKDGEVQNTFGYSLSNLFSESFPIFSIPYHKAFSQNFVSGILDILISDNELKERFIEALNSNKSDYKMIADDQQRKLACVWNPFLDGWELNAQHVDMIMGSHVLKDMPLRKQAEILFCLGGVFCKYSSSDMFGTEYDSPEILRRYANGLIEQAYKTDPQVFGSVYYYNDILDRLQGRNNVFTCTAVLTDMLTEHAKESFPEIFSLYYPVAWR 782
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhh.....hhhhhh............................................eeeeee..............eeeee....................................ee.......................eeee..eeee......hhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh...hhhhhh........................eeee......eeeeehhhhhhhhhh..........eeee..ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh..........hhhhhhhhhhhhh..ee..eehhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3nb2 C 171 QGRACLSKAELTADLIWLSANRTGEESAEELNYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCIIRALFENSNFSNSNLKNASFKGSSYIQYPPILNEADLTGAIIIPGMVLSGAILGDVKELFSEKSNTINLGGCYIDLSDIQENILSVLDNYTKSNKSILLTMNTSDDKYNHDKVRAAEELIKKISLDELAAFRPYVKMSLADSFSIHPYLNNANIQQWLEPICDDFFDTIMSWFNNSIMMYMENGSLLQAGMYFERHPGAMVSYNSSFIQIVMNGSRRDGMQERFRELYEVYLKNEKVYPVTQQSDFGLCDGSGKPDWDDDSDLAYNWVLLSSQDDGMAMMCSLSHMVDMLSPNTSTNWMSFFLYKDGEVQNTFGYSLSNLFSESFPIFSIPYHKAFSQNFVSGILDILISDNELKERFIEALNSNKSDYKMIADDQQRKLACVWNPFLDGWELNAQHVDMIMGSHVLKDMPLRKQAEILFCLGGVFCKYSSSDMFGTEYDSPEILRRYANGLIEQAYKTDPQVFGSVYYYNDILDRLQGRNNVFTCTAVLTDMLTEHAKESFPEIFSLYYPVAWR 782
                                   180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780  


Chain D from PDB  Type:PROTEIN  Length:612
 aligned with A0A0H3JDV8_E | A0A0H3JDV8 from UniProtKB/TrEMBL  Length:782

    Alignment length:612
                                   180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780  
         A0A0H3JDV8_E   171 QGRACLSKAELTADLIWLSANRTGEESAEELNYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCIIRALFENSNFSNSNLKNASFKGSSYIQYPPILNEADLTGAIIIPGMVLSGAILGDVKELFSEKSNTINLGGCYIDLSDIQENILSVLDNYTKSNKSILLTMNTSDDKYNHDKVRAAEELIKKISLDELAAFRPYVKMSLADSFSIHPYLNNANIQQWLEPICDDFFDTIMSWFNNSIMMYMENGSLLQAGMYFERHPGAMVSYNSSFIQIVMNGSRRDGMQERFRELYEVYLKNEKVYPVTQQSDFGLCDGSGKPDWDDDSDLAYNWVLLSSQDDGMAMMCSLSHMVDMLSPNTSTNWMSFFLYKDGEVQNTFGYSLSNLFSESFPIFSIPYHKAFSQNFVSGILDILISDNELKERFIEALNSNKSDYKMIADDQQRKLACVWNPFLDGWELNAQHVDMIMGSHVLKDMPLRKQAEILFCLGGVFCKYSSSDMFGTEYDSPEILRRYANGLIEQAYKTDPQVFGSVYYYNDILDRLQGRNNVFTCTAVLTDMLTEHAKESFPEIFSLYYPVAWR 782
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhh.......................................................eeeeee..............eeeee....................................ee.......................eeee..eeee......hhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhh..hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh...hhhhhhh.......................eeee......eeeeehhhhhhhhhh..........eeee..ee.hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh..........hhhhhhhhhhhhh..ee..eehhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3nb2 D 171 QGRACLSKAELTADLIWLSANRTGEESAEELNYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCIIRALFENSNFSNSNLKNASFKGSSYIQYPPILNEADLTGAIIIPGMVLSGAILGDVKELFSEKSNTINLGGCYIDLSDIQENILSVLDNYTKSNKSILLTMNTSDDKYNHDKVRAAEELIKKISLDELAAFRPYVKMSLADSFSIHPYLNNANIQQWLEPICDDFFDTIMSWFNNSIMMYMENGSLLQAGMYFERHPGAMVSYNSSFIQIVMNGSRRDGMQERFRELYEVYLKNEKVYPVTQQSDFGLCDGSGKPDWDDDSDLAYNWVLLSSQDDGMAMMCSLSHMVDMLSPNTSTNWMSFFLYKDGEVQNTFGYSLSNLFSESFPIFSIPYHKAFSQNFVSGILDILISDNELKERFIEALNSNKSDYKMIADDQQRKLACVWNPFLDGWELNAQHVDMIMGSHVLKDMPLRKQAEILFCLGGVFCKYSSSDMFGTEYDSPEILRRYANGLIEQAYKTDPQVFGSVYYYNDILDRLQGRNNVFTCTAVLTDMLTEHAKESFPEIFSLYYPVAWR 782
                                   180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3NB2)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3NB2)

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(no "Pfam Domain" information available for 3NB2)

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        A0A0H3JDV8_E | A0A0H3JDV8: 3naw 3sqv

(-) Related Entries Specified in the PDB File

3naw THE SAME PROTEIN IN DIFFERENT CRYSTAL FORM