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(-) Description

Title :  PROTEIN STRUCTURE OF TYPE III PLASMID SEGREGATION TUBZ
 
Authors :  M. A. Schumacher, L. Ni
Date :  18 Mar 10  (Deposition) - 07 Jul 10  (Release) - 21 Jul 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A
Keywords :  Tubulin-Like Protein, Plasmid Segregation, Gtp-Binding, Nucleotide- Binding, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Ni, W. Xu, M. Kumaraswami, M. A. Schumacher
From The Cover: Plasmid Protein Tubr Uses A Distinct Mode O Hth-Dna Binding And Recruits The Prokaryotic Tubulin Homolo Tubz To Effect Dna Partition.
Proc. Natl. Acad. Sci. Usa V. 107 11763 2010
PubMed-ID: 20534443  |  Reference-DOI: 10.1073/PNAS.1003817107

(-) Compounds

Molecule 1 - FTSZ/TUBULIN-RELATED PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21-GOLD(DE3)
    Expression System Taxid: 562
    Expression System Vector: PET15B(+)
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 1-428
    Gene: PBT156
    Organism Scientific: BACILLUS THURINGIENSIS
    Organism Taxid: 1430
    Strain: SEROVAR ISRAELENSIS

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 9)

Asymmetric/Biological Unit (1, 9)
No.NameCountTypeFull Name
1MSE9Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 3M8K)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3M8K)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3M8K)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3M8K)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3M8K)

(-) Exons   (0, 0)

(no "Exon" information available for 3M8K)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:393
 aligned with Q8KNP3_BACTI | Q8KNP3 from UniProtKB/TrEMBL  Length:484

    Alignment length:404
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400    
         Q8KNP3_BACTI     1 MLLNSNELEHIHSTNHSVNDISIRWGVIGAGQKGNKEADLFAGYKFSNGTTCYPTLAVNFAESDMMHLQNIIKEDRIHFDGLKGAARTPSVVTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSLVLQLIREQFFPCPVSMLISLPSGDPDEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNTQMQRIIESQKGTKDLKNRYVNWKEVANDNVVSTLHEINIIPENYGSDNVTYDPSDLIKLLSIPGRFLTIGKARIAKFDLHSLENSIKRSLDEGFFSAEHQFETATMYGGFVLRPSNADFFKDVNTENRIRNTLGEYKRLDEIAGKFGDPIWDNEYAVCYTIFAGMTMPKRYISLAREGKELAEKQEQLRA 404
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhh.........eeeee.hhhhhhhhhhhh............eeeee............hhh.eee.-----------hhhhhh......hhhhhhhhhhhhhhhhh..........eeeeeee..hhhhhhhhhhhhhhhhh......eeeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeeeeeehhhhhhhhhh............hhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhh...eeeeeeeee...hhhhhhhhhhhhhhh.......hhhhh.eeeeeeeee..hhhhhhhhhhhhhhhhhhh..hhhhheeeee..ee....eeeeeeeeee...hhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3m8k A   1 mLLNSNELEHIHSTNHSVNDISIRWGVIGAGQKGNKEADLFAGYKFSNGTTCYPTLAVNFAESDmmHLQNIIKEDRIHF-----------VVTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSLVLQLIREQFFPCPVSmLISLPSGDPDEINNALVLLSEIDEFmREQDRLFGNSDIKPLANVIVNDNTQmQRIIESQKGTKDLKNRYVNWKEVANDNVVSTLHEINIIPENYGSDNVTYDPSDLIKLLSIPGRFLTIGKARIAKFDLHSLENSIKRSLDEGFFSAEHQFETATmYGGFVLRPSNADFFKDVNTENRIRNTLGEYKRLDEIAGKFGDPIWDNEYAVCYTIFAGmTmPKRYISLAREGKELAEKQEQLRA 404
                            |       10        20        30        40        50        60    ||  70        |-         -|      100       110       120       130       140       150       160   |   170       180       190       200       210     | 220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380|      390       400    
                            |                                                              65-MSE        79          91                                                                      164-MSE                   190-MSE                   216-MSE                                                                                                 320-MSE                                                    379-MSE                     
                            1-MSE                                                           66-MSE                                                                                                                                                                                                                                                                                                                    381-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3M8K)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3M8K)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3M8K)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (Q8KNP3_BACTI | Q8KNP3)
molecular function
    GO:0005525    GTP binding    Interacting selectively and non-covalently with GTP, guanosine triphosphate.
    GO:0003924    GTPase activity    Catalysis of the reaction: GTP + H2O = GDP + phosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

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 Related Entries

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        Q8KNP3_BACTI | Q8KNP3: 2xka 2xkb 3j4s 3j4t 3m89

(-) Related Entries Specified in the PDB File

3m89 3m8e 3m8k