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(-) Description

Title :  CRYSTAL STRUCTURE OF B/PERTH NEURAMINIDASE D197E MUTANT
 
Authors :  A. J. Oakley, J. L. Mckimm-Breschkin
Date :  02 Oct 09  (Deposition) - 01 Sep 10  (Release) - 15 Sep 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.19
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1:  A,B,C,D,E  (1x)
Biol. Unit 2:  B,E,F,G,H,I  (1x)
Biol. Unit 3:  B,I,J,K,L,M  (1x)
Biol. Unit 4:  B,M,N,O,P  (1x)
Keywords :  Influenza, Neuraminidase, Mutation, Resistance, Hydrolase, Cell Membrane, Glycosidase, Membrane, Transmembrane, Virion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. J. Oakley, S. Barrett, T. S. Peat, J. Newman, V. A. Streltsov, L. Waddington, T. Saito, M. Tashiro, J. L. Mckimm-Breschkin
Structural And Functional Basis Of Resistance To Neuraminidase Inhibitors Of Influenza B Viruses.
J. Med. Chem. 2010
PubMed-ID: 20695427  |  Reference-DOI: 10.1021/JM100621S

(-) Compounds

Molecule 1 - NEURAMINIDASE
    Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P
    EC Number: 3.2.1.18
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Plasmid: PFASTBAC
    Expression System Strain: SF21
    Expression System Taxid: 7108
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 70-466
    Mutation: YES
    Organism Common: VIRUSES
    Organism Scientific: INFLUENZA B VIRUS
    Organism Taxid: 343983
    Strain: B/PERTH/211/2001

 Structural Features

(-) Chains, Units

  12345678910111213141516
Asymmetric Unit : ABCDEFGHIJKLMNOP
Biological Unit 1 (1x): ABCDE           
Biological Unit 2 (1x):  B  EFGHI       
Biological Unit 3 (1x):  B      IJKLM   
Biological Unit 4 (1x):  B          MNOP

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 68)

Asymmetric Unit (4, 68)
No.NameCountTypeFull Name
1CA16Ligand/IonCALCIUM ION
2NAG16Ligand/IonN-ACETYL-D-GLUCOSAMINE
3SO416Ligand/IonSULFATE ION
4YT320Ligand/IonYTTRIUM (III) ION
Biological Unit 1 (3, 17)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2NAG5Ligand/IonN-ACETYL-D-GLUCOSAMINE
3SO45Ligand/IonSULFATE ION
4YT37Ligand/IonYTTRIUM (III) ION
Biological Unit 2 (3, 20)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2NAG6Ligand/IonN-ACETYL-D-GLUCOSAMINE
3SO46Ligand/IonSULFATE ION
4YT38Ligand/IonYTTRIUM (III) ION
Biological Unit 3 (3, 19)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2NAG6Ligand/IonN-ACETYL-D-GLUCOSAMINE
3SO46Ligand/IonSULFATE ION
4YT37Ligand/IonYTTRIUM (III) ION
Biological Unit 4 (3, 16)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2NAG5Ligand/IonN-ACETYL-D-GLUCOSAMINE
3SO45Ligand/IonSULFATE ION
4YT36Ligand/IonYTTRIUM (III) ION

(-) Sites  (68, 68)

Asymmetric Unit (68, 68)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREPRO A:83 , ASN A:284BINDING SITE FOR RESIDUE NAG A 900
02AC2SOFTWAREASP A:293 , THR A:297 , ASP A:324 , GLY A:344 , GLY A:346BINDING SITE FOR RESIDUE CA A 1000
03AC3SOFTWAREARG A:116 , ASP A:149 , ARG A:292 , ARG A:374 , TYR A:409 , YT3 A:1002BINDING SITE FOR RESIDUE SO4 A 1001
04AC4SOFTWAREASP A:149 , HOH A:563 , SO4 A:1001BINDING SITE FOR RESIDUE YT3 A 1002
05AC5SOFTWAREGLU A:168 , HOH A:864 , GLU B:168 , GLU C:168 , GLU D:168BINDING SITE FOR RESIDUE YT3 A 1
06AC6SOFTWAREPRO B:83 , ASN B:284BINDING SITE FOR RESIDUE NAG B 900
07AC7SOFTWAREASP B:293 , THR B:297 , ASP B:324 , GLY B:344 , GLY B:346BINDING SITE FOR RESIDUE CA B 1000
08AC8SOFTWAREARG B:116 , ASP B:149 , ARG B:292 , ARG B:374 , TYR B:409 , YT3 B:1002 , HOH B:1264BINDING SITE FOR RESIDUE SO4 B 1001
09AC9SOFTWAREASP B:149 , SO4 B:1001 , HOH B:1264BINDING SITE FOR RESIDUE YT3 B 1002
10BC1SOFTWAREPRO C:83 , ASN C:284 , HOH C:1277BINDING SITE FOR RESIDUE NAG C 900
11BC2SOFTWAREASP C:293 , THR C:297 , ASP C:324 , GLY C:344 , GLY C:346BINDING SITE FOR RESIDUE CA C 1000
12BC3SOFTWAREARG C:116 , ASP C:149 , ARG C:292 , ARG C:374 , TYR C:409 , YT3 C:1002BINDING SITE FOR RESIDUE SO4 C 1001
13BC4SOFTWAREASP C:149 , SO4 C:1001BINDING SITE FOR RESIDUE YT3 C 1002
14BC5SOFTWAREPRO D:83 , ASN D:284BINDING SITE FOR RESIDUE NAG D 900
15BC6SOFTWAREASP D:293 , THR D:297 , ASP D:324 , GLY D:344 , GLY D:346BINDING SITE FOR RESIDUE CA D 1000
16BC7SOFTWAREARG D:116 , ASP D:149 , ARG D:292 , ARG D:374 , TYR D:409 , YT3 D:1002BINDING SITE FOR RESIDUE SO4 D 1001
17BC8SOFTWAREASP D:149 , SO4 D:1001BINDING SITE FOR RESIDUE YT3 D 1002
18BC9SOFTWAREGLU E:168 , GLU F:168 , GLU G:168 , HOH G:1232 , GLU H:168BINDING SITE FOR RESIDUE YT3 E 2
19CC1SOFTWAREPRO E:83 , ASN E:284BINDING SITE FOR RESIDUE NAG E 900
20CC2SOFTWAREASP E:293 , THR E:297 , ASP E:324 , GLY E:344 , GLY E:346BINDING SITE FOR RESIDUE CA E 1000
21CC3SOFTWAREARG E:116 , ASP E:149 , ARG E:292 , ARG E:374 , TYR E:409 , HOH E:838 , YT3 E:1002BINDING SITE FOR RESIDUE SO4 E 1001
22CC4SOFTWAREASP E:149 , HOH E:838 , HOH E:905 , SO4 E:1001BINDING SITE FOR RESIDUE YT3 E 1002
23CC5SOFTWAREPRO F:83 , ASN F:284 , HOH F:945BINDING SITE FOR RESIDUE NAG F 900
24CC6SOFTWAREASP F:293 , THR F:297 , ASP F:324 , GLY F:344 , GLY F:346BINDING SITE FOR RESIDUE CA F 1000
25CC7SOFTWAREARG F:116 , ASP F:149 , ARG F:292 , ARG F:374 , TYR F:409 , YT3 F:1002BINDING SITE FOR RESIDUE SO4 F 1001
26CC8SOFTWAREASP F:149 , SO4 F:1001BINDING SITE FOR RESIDUE YT3 F 1002
27CC9SOFTWAREPRO G:83 , ASN G:284BINDING SITE FOR RESIDUE NAG G 900
28DC1SOFTWAREASP G:293 , THR G:297 , ASP G:324 , GLY G:344 , GLY G:346BINDING SITE FOR RESIDUE CA G 1000
29DC2SOFTWAREARG G:116 , ASP G:149 , ARG G:292 , ARG G:374 , TYR G:409 , HOH G:480 , YT3 G:1002BINDING SITE FOR RESIDUE SO4 G 1001
30DC3SOFTWAREASP G:149 , HOH G:480 , SO4 G:1001BINDING SITE FOR RESIDUE YT3 G 1002
31DC4SOFTWAREPRO H:83 , ASN H:284BINDING SITE FOR RESIDUE NAG H 900
32DC5SOFTWAREASP H:293 , THR H:297 , ASP H:324 , GLY H:344 , GLY H:346BINDING SITE FOR RESIDUE CA H 1000
33DC6SOFTWAREARG H:116 , ASP H:149 , ARG H:292 , ARG H:374 , TYR H:409 , YT3 H:1002BINDING SITE FOR RESIDUE SO4 H 1001
34DC7SOFTWAREASP H:149 , HOH H:986 , SO4 H:1001BINDING SITE FOR RESIDUE YT3 H 1002
35DC8SOFTWAREGLU I:168 , GLU J:168 , GLU K:168 , GLU L:168 , HOH L:854BINDING SITE FOR RESIDUE YT3 I 3
36DC9SOFTWAREPRO I:83 , ASN I:284 , HOH I:1250BINDING SITE FOR RESIDUE NAG I 900
37EC1SOFTWAREASP I:293 , THR I:297 , ASP I:324 , GLY I:344 , GLY I:346BINDING SITE FOR RESIDUE CA I 1000
38EC2SOFTWAREARG I:116 , ASP I:149 , ARG I:292 , ARG I:374 , TYR I:409 , HOH I:930 , YT3 I:1002BINDING SITE FOR RESIDUE SO4 I 1001
39EC3SOFTWAREASP I:149 , HOH I:930 , SO4 I:1001BINDING SITE FOR RESIDUE YT3 I 1002
40EC4SOFTWAREPRO J:83 , ASN J:284 , HOH J:1324BINDING SITE FOR RESIDUE NAG J 900
41EC5SOFTWAREASP J:293 , THR J:297 , ASP J:324 , GLY J:344 , GLY J:346BINDING SITE FOR RESIDUE CA J 1000
42EC6SOFTWAREARG J:116 , ASP J:149 , ARG J:292 , ARG J:374 , TYR J:409 , YT3 J:1002BINDING SITE FOR RESIDUE SO4 J 1001
43EC7SOFTWAREASP J:149 , HOH J:583 , SO4 J:1001BINDING SITE FOR RESIDUE YT3 J 1002
44EC8SOFTWAREPRO K:83 , ASN K:284BINDING SITE FOR RESIDUE NAG K 900
45EC9SOFTWAREASP K:293 , THR K:297 , ASP K:324 , GLY K:344 , GLY K:346 , HOH K:500BINDING SITE FOR RESIDUE CA K 1000
46FC1SOFTWAREARG K:116 , ASP K:149 , ARG K:292 , ARG K:374 , TYR K:409 , YT3 K:1002BINDING SITE FOR RESIDUE SO4 K 1001
47FC2SOFTWAREASP K:149 , SO4 K:1001 , HOH K:1251BINDING SITE FOR RESIDUE YT3 K 1002
48FC3SOFTWAREPRO L:83 , ASN L:284BINDING SITE FOR RESIDUE NAG L 900
49FC4SOFTWAREASP L:293 , THR L:297 , ASP L:324 , GLY L:344 , GLY L:346BINDING SITE FOR RESIDUE CA L 1000
50FC5SOFTWAREARG L:116 , ASP L:149 , ARG L:292 , ARG L:374 , TYR L:409 , YT3 L:1002BINDING SITE FOR RESIDUE SO4 L 1001
51FC6SOFTWAREASP L:149 , HOH L:523 , HOH L:534 , HOH L:711 , SO4 L:1001BINDING SITE FOR RESIDUE YT3 L 1002
52FC7SOFTWAREPRO M:83 , ASN M:284 , HOH M:1282BINDING SITE FOR RESIDUE NAG M 900
53FC8SOFTWAREASP M:293 , THR M:297 , ASP M:324 , GLY M:344 , GLY M:346BINDING SITE FOR RESIDUE CA M 1000
54FC9SOFTWAREARG M:116 , ASP M:149 , ARG M:292 , ARG M:374 , TYR M:409 , YT3 M:1002 , HOH M:1028BINDING SITE FOR RESIDUE SO4 M 1001
55GC1SOFTWAREGLU M:168 , GLU N:168 , GLU O:168 , GLU P:168 , HOH P:1132BINDING SITE FOR RESIDUE YT3 N 4
56GC2SOFTWAREASP M:149 , HOH M:921 , SO4 M:1001 , HOH M:1028BINDING SITE FOR RESIDUE YT3 M 1002
57GC3SOFTWAREPRO N:83 , ASN N:284BINDING SITE FOR RESIDUE NAG N 900
58GC4SOFTWAREASP N:293 , THR N:297 , ASP N:324 , GLY N:344 , GLY N:346BINDING SITE FOR RESIDUE CA N 1000
59GC5SOFTWAREARG N:116 , ASP N:149 , ARG N:292 , ARG N:374 , TYR N:409 , YT3 N:1002BINDING SITE FOR RESIDUE SO4 N 1001
60GC6SOFTWAREASP N:149 , SO4 N:1001BINDING SITE FOR RESIDUE YT3 N 1002
61GC7SOFTWAREPRO O:83 , ASN O:284BINDING SITE FOR RESIDUE NAG O 900
62GC8SOFTWAREASP O:293 , THR O:297 , ASP O:324 , GLY O:344 , GLY O:346BINDING SITE FOR RESIDUE CA O 1000
63GC9SOFTWAREARG O:116 , ASP O:149 , ARG O:292 , ARG O:374 , TYR O:409 , YT3 O:1002BINDING SITE FOR RESIDUE SO4 O 1001
64HC1SOFTWAREASP O:149 , SO4 O:1001BINDING SITE FOR RESIDUE YT3 O 1002
65HC2SOFTWAREPRO P:83 , ARG P:84 , ASN P:284BINDING SITE FOR RESIDUE NAG P 900
66HC3SOFTWAREASP P:293 , THR P:297 , ASP P:324 , GLY P:344 , GLY P:346BINDING SITE FOR RESIDUE CA P 1000
67HC4SOFTWAREARG P:116 , ASP P:149 , ARG P:292 , ARG P:374 , TYR P:409 , YT3 P:1002 , HOH P:1146BINDING SITE FOR RESIDUE SO4 P 1001
68HC5SOFTWAREASP P:149 , SO4 P:1001 , HOH P:1146BINDING SITE FOR RESIDUE YT3 P 1002

(-) SS Bonds  (128, 128)

Asymmetric Unit
No.Residues
1A:87 -A:420
2A:122 -A:127
3A:182 -A:229
4A:231 -A:236
5A:277 -A:291
6A:279 -A:289
7A:318 -A:337
8A:424 -A:447
9B:87 -B:420
10B:122 -B:127
11B:182 -B:229
12B:231 -B:236
13B:277 -B:291
14B:279 -B:289
15B:318 -B:337
16B:424 -B:447
17C:87 -C:420
18C:122 -C:127
19C:182 -C:229
20C:231 -C:236
21C:277 -C:291
22C:279 -C:289
23C:318 -C:337
24C:424 -C:447
25D:87 -D:420
26D:122 -D:127
27D:182 -D:229
28D:231 -D:236
29D:277 -D:291
30D:279 -D:289
31D:318 -D:337
32D:424 -D:447
33E:87 -E:420
34E:122 -E:127
35E:182 -E:229
36E:231 -E:236
37E:277 -E:291
38E:279 -E:289
39E:318 -E:337
40E:424 -E:447
41F:87 -F:420
42F:122 -F:127
43F:182 -F:229
44F:231 -F:236
45F:277 -F:291
46F:279 -F:289
47F:318 -F:337
48F:424 -F:447
49G:87 -G:420
50G:122 -G:127
51G:182 -G:229
52G:231 -G:236
53G:277 -G:291
54G:279 -G:289
55G:318 -G:337
56G:424 -G:447
57H:87 -H:420
58H:122 -H:127
59H:182 -H:229
60H:231 -H:236
61H:277 -H:291
62H:279 -H:289
63H:318 -H:337
64H:424 -H:447
65I:87 -I:420
66I:122 -I:127
67I:182 -I:229
68I:231 -I:236
69I:277 -I:291
70I:279 -I:289
71I:318 -I:337
72I:424 -I:447
73J:87 -J:420
74J:122 -J:127
75J:182 -J:229
76J:231 -J:236
77J:277 -J:291
78J:279 -J:289
79J:318 -J:337
80J:424 -J:447
81K:87 -K:420
82K:122 -K:127
83K:182 -K:229
84K:231 -K:236
85K:277 -K:291
86K:279 -K:289
87K:318 -K:337
88K:424 -K:447
89L:87 -L:420
90L:122 -L:127
91L:182 -L:229
92L:231 -L:236
93L:277 -L:291
94L:279 -L:289
95L:318 -L:337
96L:424 -L:447
97M:87 -M:420
98M:122 -M:127
99M:182 -M:229
100M:231 -M:236
101M:277 -M:291
102M:279 -M:289
103M:318 -M:337
104M:424 -M:447
105N:87 -N:420
106N:122 -N:127
107N:182 -N:229
108N:231 -N:236
109N:277 -N:291
110N:279 -N:289
111N:318 -N:337
112N:424 -N:447
113O:87 -O:420
114O:122 -O:127
115O:182 -O:229
116O:231 -O:236
117O:277 -O:291
118O:279 -O:289
119O:318 -O:337
120O:424 -O:447
121P:87 -P:420
122P:122 -P:127
123P:182 -P:229
124P:231 -P:236
125P:277 -P:291
126P:279 -P:289
127P:318 -P:337
128P:424 -P:447

(-) Cis Peptide Bonds  (40, 40)

Asymmetric Unit
No.Residues
1Gln A:138 -Pro A:139
2Thr A:325 -Pro A:326
3Gln B:138 -Pro B:139
4Thr B:325 -Pro B:326
5Asn B:340 -Gly B:341
6Gln C:138 -Pro C:139
7Thr C:325 -Pro C:326
8Asn C:340 -Gly C:341
9Gln D:138 -Pro D:139
10Thr D:325 -Pro D:326
11Asn D:340 -Gly D:341
12Gln E:138 -Pro E:139
13Thr E:325 -Pro E:326
14Gln F:138 -Pro F:139
15Thr F:325 -Pro F:326
16Asn F:340 -Gly F:341
17Gln G:138 -Pro G:139
18Thr G:325 -Pro G:326
19Gln H:138 -Pro H:139
20Thr H:325 -Pro H:326
21Gln I:138 -Pro I:139
22Thr I:325 -Pro I:326
23Gln J:138 -Pro J:139
24Thr J:325 -Pro J:326
25Asn J:340 -Gly J:341
26Gln K:138 -Pro K:139
27Thr K:325 -Pro K:326
28Asn K:340 -Gly K:341
29Gln L:138 -Pro L:139
30Thr L:325 -Pro L:326
31Asn L:340 -Gly L:341
32Gln M:138 -Pro M:139
33Thr M:325 -Pro M:326
34Asn M:340 -Gly M:341
35Gln N:138 -Pro N:139
36Thr N:325 -Pro N:326
37Gln O:138 -Pro O:139
38Thr O:325 -Pro O:326
39Gln P:138 -Pro P:139
40Thr P:325 -Pro P:326

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3K38)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3K38)

(-) Exons   (0, 0)

(no "Exon" information available for 3K38)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:389
 aligned with Q3S340_9INFB | Q3S340 from UniProtKB/TrEMBL  Length:466

    Alignment length:389
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         
         Q3S340_9INFB    78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
               SCOP domains d3k38a_ A: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeehhhhhh........eeeeeeeeee....eeeeeeeeeee.................eeeeee..........eeeee..eeeeee....eeeeeee.hhhh.eeeeee..eeeeeee.......ee.....eee..eeeeeee..........eeeeee..eeeeee..ee.....eeeeeee....eeeeeee........eeeeee....eeeeee...................................eeeeee..eeeeeeee.......eeeeeeeee...........eeeeeeeeeeee...eeeeeee....eeeeeeeeeeee......eeeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k38 A  78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPENNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         


Chain B from PDB  Type:PROTEIN  Length:389
 aligned with Q3S340_9INFB | Q3S340 from UniProtKB/TrEMBL  Length:466

    Alignment length:389
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         
         Q3S340_9INFB    78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
               SCOP domains d3k38b_ B: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeehhhhhh........eeeeeeeeee....eeeeeeeeeee.................eeeeee..........eeeee..eeeeee....eeeeeee.hhhh.eeeeee..eeeeeee.......ee.....eee..eeeeeee..........eeeeee..eeeeee..ee.....eeeeeee....eeeeeee........eeeeee....eeeeee...................................eeeeee..eeeeeeee.......eeeeeeeee...........eeeeeeeeeeee...eeeeeee....eeeeeeeeeeee......eeeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k38 B  78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPENNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         


Chain C from PDB  Type:PROTEIN  Length:389
 aligned with Q3S340_9INFB | Q3S340 from UniProtKB/TrEMBL  Length:466

    Alignment length:389
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         
         Q3S340_9INFB    78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
               SCOP domains d3k38c_ C: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeehhhhhh........eeeeeeeeee....eeeeeeeeeee.................eeeeee..........eeeee..eeeeee....eeeeeee.hhhh.eeeeee..eeeeeee.......ee.....eee..eeeeeee..........eeeeee..eeeeee..ee.....eeeeeee....eeeeeee........eeeeee....eeeeee...................................eeeeee..eeeeeeee.......eeeeeeeee...........eeeeeeeeeeee...eeeeeee....eeeeeeeeeee........eeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k38 C  78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPENNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         


Chain D from PDB  Type:PROTEIN  Length:389
 aligned with Q3S340_9INFB | Q3S340 from UniProtKB/TrEMBL  Length:466

    Alignment length:389
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         
         Q3S340_9INFB    78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
               SCOP domains d3k38d_ D: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeehhhhhh........eeeeeeeeee....eeeeeeeeeee.................eeeeee..........eeeee..eeeeee....eeeeeee.hhhh.eeeeee..eeeeeee.......ee.....eee..eeeeeee..........eeeeee..eeeeee..ee.....eeeeeee....eeeeeee........eeeeee....eeeeee...................................eeeeee..eeeeeeee.......eeeeeeeee...........eeeeeeeeeeee...eeeeeee....eeeeeeeeeeee......eeeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k38 D  78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPENNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         


Chain E from PDB  Type:PROTEIN  Length:389
 aligned with Q3S340_9INFB | Q3S340 from UniProtKB/TrEMBL  Length:466

    Alignment length:389
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         
         Q3S340_9INFB    78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
               SCOP domains d3k38e_ E: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeehhhhhh........eeeeeeeeee....eeeeeeeeeee.................eeeeee..........eeeee..eeeeee....eeeeeee.hhhh.eeeeee..eeeeeee.......ee.....eee..eeeeeee..........eeeeee..eeeeee..ee.....eeeeeee....eeeeeee........eeeeee....eeeeee...................................eeeeee..eeeeeeee.......eeeeeeeee...........eeeeeeeeeeee...eeeeeee....eeeeeeeeeee........eeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k38 E  78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPENNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         


Chain F from PDB  Type:PROTEIN  Length:389
 aligned with Q3S340_9INFB | Q3S340 from UniProtKB/TrEMBL  Length:466

    Alignment length:389
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         
         Q3S340_9INFB    78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
               SCOP domains d3k38f_ F: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeehhhhhh........eeeeeeeeee....eeeeeeeeeee.................eeeeee..........eeeee..eeeeee....eeeeeee.hhhh.eeeeee..eeeeeee.......ee.....eee..eeeeeee..........eeeeee..eeeeee..ee.....eeeeeee....eeeeeee........eeeeee....eeeeee...................................eeeeee..eeeeeeee.......eeeeeeeee...........eeeeeeeeeeee...eeeeeee....eeeeeeeeeee........eeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k38 F  78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPENNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         


Chain G from PDB  Type:PROTEIN  Length:389
 aligned with Q3S340_9INFB | Q3S340 from UniProtKB/TrEMBL  Length:466

    Alignment length:389
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         
         Q3S340_9INFB    78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
               SCOP domains d3k38g_ G: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeehhhhhh........eeeeeeeeee....eeeeeeeeeee.................eeeeee..........eeeee..eeeeee....eeeeeee.hhhh.eeeeee..eeeeeee.......ee.....eee..eeeeeee..........eeeeee..eeeeee..ee.....eeeeeee....eeeeeee........eeeeee....eeeeee...................................eeeee....eeeeeee.......eeeeeeeee...........eeeeeeeeeeee...eeeeeee....eeeeeeeeeee........eeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k38 G  78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPENNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         


Chain H from PDB  Type:PROTEIN  Length:389
 aligned with Q3S340_9INFB | Q3S340 from UniProtKB/TrEMBL  Length:466

    Alignment length:389
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         
         Q3S340_9INFB    78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
               SCOP domains d3k38h_ H: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeehhhhhh........eeeeeeeeee....eeeeeeeeeee.................eeeeee..........eeeee..eeeeee....eeeeeee......eeeeee..eeeeeee.......ee.....eee..eeeeeee..........eeeeee..eeeeee..ee.....eeeeeee....eeeeeee........eeeeee....eeeeee..................................eeeeeee..eeeeeeee.......eeeeeeeee...........eeeeeeeeeeee...eeeeeee....eeeeeeeeeee........eeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k38 H  78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPENNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         


Chain I from PDB  Type:PROTEIN  Length:389
 aligned with Q3S340_9INFB | Q3S340 from UniProtKB/TrEMBL  Length:466

    Alignment length:389
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         
         Q3S340_9INFB    78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
               SCOP domains d3k38i_ I: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeehhhhhh........eeeeeeeeee....eeeeeeeeeee.................eeeeee..........eeeee..eeeeee....eeeeeee.hhhh.eeeeee..eeeeeee.......ee.....eee..eeeeeee..........eeeeee..eeeeee..ee.....eeeeeee....eeeeeee........eeeeee....eeeeee...................................eeeee....eeeeeee.......eeeeeeeee...........eeeeeeeeeeee...eeeeeee....eeeeeeeeeee........eeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k38 I  78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPENNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         


Chain J from PDB  Type:PROTEIN  Length:389
 aligned with Q3S340_9INFB | Q3S340 from UniProtKB/TrEMBL  Length:466

    Alignment length:389
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         
         Q3S340_9INFB    78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
               SCOP domains d3k38j_ J: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeehhhhhh........eeeeeeeeee....eeeeeeeeeee.................eeeeee..........eeeee..eeeeee....eeeeeee.hhhh.eeeeee..eeeeeee.......ee.....eee..eeeeeee..........eeeeee..eeeeee..ee.....eeeeeee....eeeeeee........eeeeee....eeeeee...................................eeeeee..eeeeeeee.......eeeeeeeee...........eeeeeeeeeeee...eeeeeee....eeeeeeeeeee........eeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k38 J  78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPENNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         


Chain K from PDB  Type:PROTEIN  Length:389
 aligned with Q3S340_9INFB | Q3S340 from UniProtKB/TrEMBL  Length:466

    Alignment length:389
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         
         Q3S340_9INFB    78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
               SCOP domains d3k38k_ K: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeehhhhhh........eeeeeeeeee....eeeeeeeeeee.................eeeeee..........eeeee..eeeeee....eeeeeee.hhhh.eeeeee..eeeeeee.......ee.....eee..eeeeeee..........eeeeee..eeeeee..ee.....eeeeeee....eeeeeee........eeeeee....eeeeee...................................eeeeee..eeeeeeee.......eeeeeeeee...........eeeeeeeeeeee...eeeeeee....eeeeeeeeeee........eeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k38 K  78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPENNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         


Chain L from PDB  Type:PROTEIN  Length:389
 aligned with Q3S340_9INFB | Q3S340 from UniProtKB/TrEMBL  Length:466

    Alignment length:389
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         
         Q3S340_9INFB    78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
               SCOP domains d3k38l_ L: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeehhhhhh........eeeeeeeeee....eeeeeeeeeee.................eeeeee..........eeeee..eeeeee....eeeeeee.hhhh.eeeeee..eeeeeee.......ee.....eee..eeeeeee..........eeeeee..eeeeee..ee.....eeeeeee....eeeeeee........eeeeee....eeeeee...................................eeeeee..eeeeeeee.......eeeeeeeee...........eeeeeeeeeeee...eeeeeee....eeeeeeeeeee........eeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k38 L  78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPENNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         


Chain M from PDB  Type:PROTEIN  Length:389
 aligned with Q3S340_9INFB | Q3S340 from UniProtKB/TrEMBL  Length:466

    Alignment length:389
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         
         Q3S340_9INFB    78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
               SCOP domains d3k38m_ M: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeehhhhhh........eeeeeeeeee....eeeeeeeeeee.................eeeeee..........eeeee..eeeeee....eeeeeee.hhhh.eeeeee..eeeeeee.......ee.....eee..eeeeeee..........eeeeee..eeeeee..ee.....eeeeeee....eeeeeee........eeeeee....eeeeee..................................eeeeee....eeeeeee.......eeeeeeeee...........eeeeeeeeeeee...eeeeeee....eeeeeeeeeee........eeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k38 M  78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPENNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         


Chain N from PDB  Type:PROTEIN  Length:389
 aligned with Q3S340_9INFB | Q3S340 from UniProtKB/TrEMBL  Length:466

    Alignment length:389
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         
         Q3S340_9INFB    78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
               SCOP domains d3k38n_ N: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeehhhhhh........eeeeeeeeee....eeeeeeeeeee.................eeeeee..........eeeee..eeeeee....eeeeeee.hhhh.eeeeee..eeeeeee.......ee.....eee..eeeeeee..........eeeeee..eeeeee..ee.....eeeeeee....eeeeeee........eeeeee....eeeeee...................................eeeeee..eeeeeeee.......eeeeeeeee...........eeeeeeeeeeee...eeeeeee....eeeeeeeeeee........eeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k38 N  78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPENNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         


Chain O from PDB  Type:PROTEIN  Length:389
 aligned with Q3S340_9INFB | Q3S340 from UniProtKB/TrEMBL  Length:466

    Alignment length:389
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         
         Q3S340_9INFB    78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
               SCOP domains d3k38o_ O: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeehhhhhh........eeeeeeeeee....eeeeeeeeeee.................eeeeee..........eeeee..eeeeee....eeeeeee.hhhh.eeeeee..eeeeeee.......ee.....eee..eeeeeee..........eeeeee..eeeeee..ee.....eeeeeee....eeeeeee........eeeeee....eeeeee...................................eeeee....eeeeeee.......eeeeeeeee...........eeeeeeeeeeee...eeeeeee....eeeeeeeeeee........eeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k38 O  78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPENNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         


Chain P from PDB  Type:PROTEIN  Length:389
 aligned with Q3S340_9INFB | Q3S340 from UniProtKB/TrEMBL  Length:466

    Alignment length:389
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457         
         Q3S340_9INFB    78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
               SCOP domains d3k38p_ P: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) Neur-3k38P01 P:78-466                                                                                                                                                                                                                                                                                                                                                                                 Pfam domains (1)
           Pfam domains (2) Neur-3k38P02 P:78-466                                                                                                                                                                                                                                                                                                                                                                                 Pfam domains (2)
           Pfam domains (3) Neur-3k38P03 P:78-466                                                                                                                                                                                                                                                                                                                                                                                 Pfam domains (3)
           Pfam domains (4) Neur-3k38P04 P:78-466                                                                                                                                                                                                                                                                                                                                                                                 Pfam domains (4)
           Pfam domains (5) Neur-3k38P05 P:78-466                                                                                                                                                                                                                                                                                                                                                                                 Pfam domains (5)
           Pfam domains (6) Neur-3k38P06 P:78-466                                                                                                                                                                                                                                                                                                                                                                                 Pfam domains (6)
           Pfam domains (7) Neur-3k38P07 P:78-466                                                                                                                                                                                                                                                                                                                                                                                 Pfam domains (7)
           Pfam domains (8) Neur-3k38P08 P:78-466                                                                                                                                                                                                                                                                                                                                                                                 Pfam domains (8)
           Pfam domains (9) Neur-3k38P09 P:78-466                                                                                                                                                                                                                                                                                                                                                                                 Pfam domains (9)
          Pfam domains (10) Neur-3k38P10 P:78-466                                                                                                                                                                                                                                                                                                                                                                                 Pfam domains (10)
          Pfam domains (11) Neur-3k38P11 P:78-466                                                                                                                                                                                                                                                                                                                                                                                 Pfam domains (11)
          Pfam domains (12) Neur-3k38P12 P:78-466                                                                                                                                                                                                                                                                                                                                                                                 Pfam domains (12)
          Pfam domains (13) Neur-3k38P13 P:78-466                                                                                                                                                                                                                                                                                                                                                                                 Pfam domains (13)
          Pfam domains (14) Neur-3k38P14 P:78-466                                                                                                                                                                                                                                                                                                                                                                                 Pfam domains (14)
          Pfam domains (15) Neur-3k38P15 P:78-466                                                                                                                                                                                                                                                                                                                                                                                 Pfam domains (15)
          Pfam domains (16) Neur-3k38P16 P:78-466                                                                                                                                                                                                                                                                                                                                                                                 Pfam domains (16)
         Sec.struct. author ..............eeeeeeehhhhhh........eeeeeeeeee....eeeeeeeeeee.................eeeeee..........eeeee..eeeeee....eeeeeee.hhhh.eeeeee..eeeeeee.......ee.....eee..eeeeeee..........eeeeee..eeeeee..ee.....eeeeeee....eeeeeee........eeeeee....eeeeee...................................eeeeee..eeeeeeee.......eeeeeeeee...........eeeeeeeeeeee...eeeeeee....eeeeeeeeeee........eeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k38 P  78 PEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPENNALLKIKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGSGGIKGGFVHQRMASKIGRWYSRTMSKTKRMGMGLYVKYDGDPWTDSDALALSGVMVSMEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL 466
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 16)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3K38)

(-) Pfam Domains  (1, 16)

Asymmetric Unit
(-)
Clan: Sialidase (56)
(-)
Family: Neur (42)
(-)
Influenza B virus (B/Perth/211/2001) (5)
1aNeur-3k38P01P:78-466
1bNeur-3k38P02P:78-466
1cNeur-3k38P03P:78-466
1dNeur-3k38P04P:78-466
1eNeur-3k38P05P:78-466
1fNeur-3k38P06P:78-466
1gNeur-3k38P07P:78-466
1hNeur-3k38P08P:78-466
1iNeur-3k38P09P:78-466
1jNeur-3k38P10P:78-466
1kNeur-3k38P11P:78-466
1lNeur-3k38P12P:78-466
1mNeur-3k38P13P:78-466
1nNeur-3k38P14P:78-466
1oNeur-3k38P15P:78-466
1pNeur-3k38P16P:78-466

(-) Gene Ontology  (15, 15)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P   (Q3S340_9INFB | Q3S340)
molecular function
    GO:0052794    exo-alpha-(2->3)-sialidase activity    Catalysis of the hydrolysis of alpha-(2->3)-glycosidic linkages of terminal sialic residues in substrates.
    GO:0052795    exo-alpha-(2->6)-sialidase activity    Catalysis of the hydrolysis of alpha-(2->6)-glycosidic linkages of terminal sialic residues in substrates.
    GO:0052796    exo-alpha-(2->8)-sialidase activity    Catalysis of the hydrolysis of alpha-(2->8)-glycosidic linkages of terminal sialic residues in substrates.
    GO:0004308    exo-alpha-sialidase activity    Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016798    hydrolase activity, acting on glycosyl bonds    Catalysis of the hydrolysis of any glycosyl bond.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
biological process
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
    GO:0033644    host cell membrane    Double layer of lipid molecules as it encloses host cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins. The host is defined as the larger of the organisms involved in a symbiotic interaction.
    GO:0020002    host cell plasma membrane    The plasma membrane surrounding a host cell.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0019012    virion    The complete fully infectious extracellular virus particle.
    GO:0055036    virion membrane    The lipid bilayer surrounding a virion.

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  Cis Peptide Bonds
    Asn B:340 - Gly B:341   [ RasMol ]  
    Asn C:340 - Gly C:341   [ RasMol ]  
    Asn D:340 - Gly D:341   [ RasMol ]  
    Asn F:340 - Gly F:341   [ RasMol ]  
    Asn J:340 - Gly J:341   [ RasMol ]  
    Asn K:340 - Gly K:341   [ RasMol ]  
    Asn L:340 - Gly L:341   [ RasMol ]  
    Asn M:340 - Gly M:341   [ RasMol ]  
    Gln A:138 - Pro A:139   [ RasMol ]  
    Gln B:138 - Pro B:139   [ RasMol ]  
    Gln C:138 - Pro C:139   [ RasMol ]  
    Gln D:138 - Pro D:139   [ RasMol ]  
    Gln E:138 - Pro E:139   [ RasMol ]  
    Gln F:138 - Pro F:139   [ RasMol ]  
    Gln G:138 - Pro G:139   [ RasMol ]  
    Gln H:138 - Pro H:139   [ RasMol ]  
    Gln I:138 - Pro I:139   [ RasMol ]  
    Gln J:138 - Pro J:139   [ RasMol ]  
    Gln K:138 - Pro K:139   [ RasMol ]  
    Gln L:138 - Pro L:139   [ RasMol ]  
    Gln M:138 - Pro M:139   [ RasMol ]  
    Gln N:138 - Pro N:139   [ RasMol ]  
    Gln O:138 - Pro O:139   [ RasMol ]  
    Gln P:138 - Pro P:139   [ RasMol ]  
    Thr A:325 - Pro A:326   [ RasMol ]  
    Thr B:325 - Pro B:326   [ RasMol ]  
    Thr C:325 - Pro C:326   [ RasMol ]  
    Thr D:325 - Pro D:326   [ RasMol ]  
    Thr E:325 - Pro E:326   [ RasMol ]  
    Thr F:325 - Pro F:326   [ RasMol ]  
    Thr G:325 - Pro G:326   [ RasMol ]  
    Thr H:325 - Pro H:326   [ RasMol ]  
    Thr I:325 - Pro I:326   [ RasMol ]  
    Thr J:325 - Pro J:326   [ RasMol ]  
    Thr K:325 - Pro K:326   [ RasMol ]  
    Thr L:325 - Pro L:326   [ RasMol ]  
    Thr M:325 - Pro M:326   [ RasMol ]  
    Thr N:325 - Pro N:326   [ RasMol ]  
    Thr O:325 - Pro O:326   [ RasMol ]  
    Thr P:325 - Pro P:326   [ RasMol ]  
 
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  3k38
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  Q3S340_9INFB | Q3S340
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  Q3S340_9INFB | Q3S340
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 Related Entries

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UniProtKB/TrEMBL
        Q3S340_9INFB | Q3S340: 3k36 3k37 3k39 3k3a

(-) Related Entries Specified in the PDB File

3k36 3k37 3k39 3k3a