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(-) Description

Title :  HELICAL MODEL OF TUBZ-BT TWO-STRANDED FILAMENT
 
Authors :  D. A. Agard, E. A. Montabana
Date :  04 Oct 13  (Deposition) - 19 Feb 14  (Release) - 19 Mar 14  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  10.80
Chains :  Asym. Unit :  F
Biol. Unit 1:  F  (10x)
Keywords :  Tubz, Ftsz-Like, Tubulin-Like, Plasmid Segregation, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. A. Montabana, D. A. Agard
Bacterial Tubulin Tubz-Bt Transitions Between A Two-Strande Intermediate And A Four-Stranded Filament Upon Gtp Hydrolysis.
Proc. Natl. Acad. Sci. Usa V. 111 3407 2014
PubMed-ID: 24550513  |  Reference-DOI: 10.1073/PNAS.1318339111
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - FTSZ/TUBULIN-RELATED PROTEIN
    Chains: F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET151TOPOD
    Expression System Strain: BL21(DE3)STAR
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: PBT156
    Organism Scientific: BACILLUS THURINGIENSIS
    Organism Taxid: 1430
    Strain: SEROVAR ISRAELENSIS
    Synonym: TUBZ-BT

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : F
Biological Unit 1 (10x): F

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3J4T)

(-) Sites  (0, 0)

(no "Site" information available for 3J4T)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3J4T)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3J4T)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3J4T)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3J4T)

(-) Exons   (0, 0)

(no "Exon" information available for 3J4T)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain F from PDB  Type:PROTEIN  Length:414
 aligned with Q8KNP3_BACTI | Q8KNP3 from UniProtKB/TrEMBL  Length:484

    Alignment length:421
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420 
         Q8KNP3_BACTI     1 MLLNSNELEHIHSTNHSVNDISIRWGVIGAGQKGNKEADLFAGYKFSNGTTCYPTLAVNFAESDMMHLQNIIKEDRIHFDGLKGAARTPSVVTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSLVLQLIREQFFPCPVSMLISLPSGDPDEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNTQMQRIIESQKGTKDLKNRYVNWKEVANDNVVSTLHEINIIPENYGSDNVTYDPSDLIKLLSIPGRFLTIGKARIAKFDLHSLENSIKRSLDEGFFSAEHQFETATMYGGFVLRPSNADFFKDVNTENRIRNTLGEYKRLDEIAGKFGDPIWDNEYAVCYTIFAGMTMPKRYISLAREGKELAEKQEQLRAEAQRKQDEEKVDISFAT 421
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhh..........eeeeeehhhhhhhhhhhhhh..........eeeee.hhhhh......hhh.eee..........hhhhhhhh......hhhhhhhhhhhhhhhhh..........eeeeeee...hhhhhhhhhhhhhhhh......eeeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeeeeeehhhhhhhhh..-------....hhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhh...eeeeeeeee...hhhhhhhhhhhhhhh.......hhhhh.eeeeeeeee..hhhhhhhhhhhhhhhhhhh..hhhhheeeee..ee....eeeeeeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3j4t F   1 MVLNSNELEHIHSTNHSVNDISIRWGVIGAGQKGNKEADLFAGYKFSNGTTCYPTLAVNFAESDMMHLQNIIKEDRIHFDGLKGAARTPSVVTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSLVLQLIREQFFPCPVSMLISLPSGDPDEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNTQMQRIIESQ-------NRYVNWKEVANDNVVSTLHEINIIPENYGSDNVTYDPSDLIKLLSIPGRFLTIGKARIAKFDLHSLENSIKRSLDEGFFSAEHQFETATMYGGFVLRPSNADFFKDVNTENRIRNTLGEYKRLDEIAGKFGDPIWDNEYAVCYTIFAGMTMPKRYISLAREGKELAEKQEQLRAEAQRKQDEEKVDISFAT 421
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220  |      -|      240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420 
                                                                                                                                                                                                                                                        223     231
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3J4T)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3J4T)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3J4T)

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain F   (Q8KNP3_BACTI | Q8KNP3)
molecular function
    GO:0005525    GTP binding    Interacting selectively and non-covalently with GTP, guanosine triphosphate.
    GO:0003924    GTPase activity    Catalysis of the reaction: GTP + H2O = GDP + phosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8KNP3_BACTI | Q8KNP3: 2xka 2xkb 3j4s 3m89 3m8k

(-) Related Entries Specified in the PDB File

2xka STARTING MODEL (CHAIN F) FOR THIS STRUCTURE
3j4t