3IIX - JenaLib

Asymmetric Unit (16, 16)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	CYS A:63 , CYS A:67 , CYS A:70 , GLY A:109 , MET A:1401	BINDING SITE FOR RESIDUE SF4 A 2460
02	AC2	SOFTWARE	SER A:108 , SER A:136 , GLY A:138 , ARG A:180 , TYR A:303 , HOH A:472 , HOH A:478 , HOH A:481 , HOH A:491 , 5AD A:1501 , SF4 A:2460	BINDING SITE FOR RESIDUE MET A 1401
03	AC3	SOFTWARE	TYR A:69 , GLN A:107 , ARG A:159 , GLU A:161 , MET A:199 , PRO A:229 , ILE A:231 , LEU A:305 , TYR A:306 , HOH A:478 , HOH A:499 , HOH A:585 , MET A:1401	BINDING SITE FOR RESIDUE 5AD A 1501
04	AC4	SOFTWARE	GLN A:98 , PHE A:99 , GLY A:100 , PRO A:276 , GLY A:277 , GLU A:280 , ARG A:284 , MET A:324 , LEU A:330 , HOH A:390 , HOH A:419 , HOH A:475 , HOH A:502 , HOH A:510 , HOH A:511 , HOH A:661 , HOH A:692 , CPS A:1704 , CPS A:1705	BINDING SITE FOR RESIDUE CPS A 1701
05	AC5	SOFTWARE	LYS A:37 , ASP A:40 , LYS A:170 , ARG A:284 , SER A:297 , LYS A:315 , ASP A:316 , THR A:317 , HOH A:360 , HOH A:541 , HOH A:575 , HOH A:662 , HOH A:719 , HOH A:721 , HOH A:790	BINDING SITE FOR RESIDUE CPS A 1702
06	AC6	SOFTWARE	ARG A:29 , GLU A:33 , THR A:247 , LEU A:250 , CO3 A:352 , HOH A:401 , HOH A:564 , HOH A:568 , HOH A:581 , HOH A:807 , CPS A:1704	BINDING SITE FOR RESIDUE CPS A 1703
07	AC7	SOFTWARE	THR A:317 , ALA A:318 , HOH A:447 , HOH A:464 , HOH A:581 , HOH A:729 , HOH A:733 , HOH A:757 , CPS A:1701 , CPS A:1703	BINDING SITE FOR RESIDUE CPS A 1704
08	AC8	SOFTWARE	LYS A:128 , MET A:324 , LYS A:325 , GLU A:328 , HOH A:359 , HOH A:455 , HOH A:610 , HOH A:692 , HOH A:703 , HOH A:802 , CPS A:1701	BINDING SITE FOR RESIDUE CPS A 1705
09	AC9	SOFTWARE	CYS A:319 , H2S A:1802 , H2S A:1803	BINDING SITE FOR RESIDUE H2S A 1801
10	BC1	SOFTWARE	CYS A:311 , CYS A:319 , HOH A:536 , H2S A:1801 , H2S A:1803	BINDING SITE FOR RESIDUE H2S A 1802
11	BC2	SOFTWARE	ARG A:279 , CYS A:319 , CSO A:322 , H2S A:1801 , H2S A:1802	BINDING SITE FOR RESIDUE H2S A 1803
12	BC3	SOFTWARE	THR A:269 , LYS A:309 , CYS A:311	BINDING SITE FOR RESIDUE H2S A 1804
13	BC4	SOFTWARE	THR A:268 , ALA A:270 , TYR A:306 , HOH A:570 , HOH A:585	BINDING SITE FOR RESIDUE CL A 349
14	BC5	SOFTWARE	ARG A:54 , THR A:134 , ARG A:155	BINDING SITE FOR RESIDUE CL A 350
15	BC6	SOFTWARE	ARG A:159 , PRO A:266 , MET A:291 , HOH A:542 , HOH A:712 , HOH A:750	BINDING SITE FOR RESIDUE CL A 351
16	BC7	SOFTWARE	PHE A:246 , HOH A:458 , HOH A:527 , HOH A:685 , CPS A:1703	BINDING SITE FOR RESIDUE CO3 A 352

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:348
 aligned with HYDE_THEMA | Q9X0Z6 from UniProtKB/Swiss-Prot  Length:348

    Alignment length:348
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340        
          HYDE_THEMA      1 MTGREILEKLERREFTREVLKEALSINDRGFNEALFKLADEIRRKYVGDEVHIRAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQSGEDPYYMPDVISDIVKEIKKMGVAVTLSLGEWPREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIPATTAMGTIVPGGREITLRCGANVIMPNWTPSPYRQLYQLYPGKICVFEKDTACIPCVMKMIELLGRKPGRDWGGRKRVFETV  348
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhh...hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeee........................hhhhhhhhhhhhhhh...eeeeee..hhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhh..eee......hhhhhhhhh...hhhhhhhhhhhhhhh..eeee..ee.....hhhhhhhhhhhhhhhh..ee..ee...............hhhhhhhhhhhhhhhh.......hhhhhhhh.hhhhhhhh....ee........hhhhh..............hhhhhhhhhhhhh..ee.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3iix A    1 MTGREILEKLERREFTREVLKEALSINDRGFNEALFKLADEIRRKYVGDEVHIRAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQSGEDPYyMPDVISDIVKEIKKMGVAVTLSLGEWPREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNcLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIPATTAMGTIVPGGREITLRCGANVIMPNWTPSPYRQLYQLYPGKICVFEKDTACIPcVMKMIELLGRKPGRDWGGRKRVFETM 1401
                                    10        20        30        40        50        60        70        80        90       100       110   |   120       130       140       150       160       170       180  |    190       200       210       220       230       240       250       260       270       280       290       300       310       320 |     330       340      ||
                                                                                                                                           114-OTY                                                              183-CSO                                                                                                                                    322-CSO                  347|
                                                                                                                                                                                                                                                                                                                                                                                    1401

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A (HYDE_THEMA | Q9X0Z6)

molecular function
	GO:0051537	2 iron, 2 sulfur cluster binding	Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.
	GO:0051539	4 iron, 4 sulfur cluster binding	Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0051536	iron-sulfur cluster binding	Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor).
biological process
	GO:0051188	cofactor biosynthetic process	The chemical reactions and pathways resulting in the formation of a cofactor, a substance that is required for the activity of an enzyme or other protein.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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	Cis Peptide Bonds
		Met A:115 - Pro A:116	[ RasMol ]
		Ser A:297 - Pro A:298	[ RasMol ]

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	3iix
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	HYDE_THEMA \| Q9X0Z6
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (9, 19)

Sites (16, 16)