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Title :  1.82 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF HOLO-(ACYL-CARRIER-PROTEIN) SYNTHASE (ACPS) FROM STAPHYLOCOCCUS AUREUS
 
Authors :  A. S. Halavaty, G. Minasov, L. Shuvalova, I Dubrovska, L. Papazisi, W. F. Anderson, Center For Structural Genomics Of Infectious D (Csgid)
Date :  13 Mar 13  (Deposition) - 27 Mar 13  (Release) - 27 Mar 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.82
Chains :  Asym./Biol. Unit :  A,B,C
Keywords :  Holo-(Acyl-Carrier-Protein) Synthase, Structural Genomics, Infectious Deseases, Fatty Acid Biosynthesis, Lipid Synthesis, Magnesium, Metal-Binding, Transferase, Center For Structural Genomics Of Infectious Diseases, Csgid, Niaid, National Institute Of Allergy And Infectious Diseases (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. S. Halavaty, Y. Kim, G. Minasov, L. Shuvalova, I. Dubrovska, J. Winsor, M. Zhou, O. Onopriyenko, T. Skarina, L. Papazisi, K. Kwon, S. N. Peterson, A. Joachimiak, A. Savchenko, W. F. Anderson
Structural Characterization And Comparison Of Three Acyl-Carrier-Protein Synthases From Pathogenic Bacteria.
Acta Crystallogr. , Sect. D V. 68 1359 2012
PubMed-ID: 22993090  |  Reference-DOI: 10.1107/S0907444912029101

(-) Compounds

Molecule 1 - HOLO-[ACYL-CARRIER-PROTEIN] SYNTHASE
    Chains: A, B, C
    EC Number: 2.7.8.7
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: ACYL-CARRIER-PROTEIN SYNTHASE
    Gene: ACPS, SACOL2061
    Organism Scientific: STAPHYLOCOCCUS AUREUS
    Organism Taxid: 93062
    Strain: COL
    Synonym: HOLO-ACP SYNTHASE, 4'-PHOSPHOPANTETHEINYL TRANSFERASE ACPS

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit : ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4JM7)

(-) Sites  (0, 0)

(no "Site" information available for 4JM7)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4JM7)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4JM7)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4JM7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4JM7)

(-) Exons   (0, 0)

(no "Exon" information available for 4JM7)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:122
                                                                                                                                                          
               SCOP domains d4jm7a_ A: automated matches                                                                                               SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhh...eeeeeeeeeehhhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.eee...eee....eeeeeeeee...eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------- Transcript
                 4jm7 A -12 DLGTENLYFQSNAMIHGIGVDLIEIDRIQALYSKQPKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKALGVAFNDIDCYNDGKPKIDYEGFIVHVSISHTEHYAMSQVVLEKS 117
                                    -3         7        17        27        37        47        57        73        83|       95       105       115  
                                                                                                         66|        83|                               
                                                                                                          73         86                               


Chain B from PDB  Type:PROTEIN  Length:116
                                                                                                                                                    
               SCOP domains d4jm7b_ B: automated matches                                                                                         SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeeeeeehhhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.hhhhh..ee....ee.....eeeeeeeee...eeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------- Transcript
                 4jm7 B  -3 QSNAMIHGIGVDLIEIDRIQALYSKQPKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKALGVAFNDIDCYNDLGKPKIDYEGFIVHVSISHTEHYAMSQVVLEKSAF 119
                                     6        16        26        36        46        56        66|       82||      93       103       113      
                                                                                                66|        83|                                  
                                                                                                 73         85                                  


Chain C from PDB  Type:PROTEIN  Length:122
                                                                                                                                                          
               SCOP domains d4jm7c_ C: automated matches                                                                                               SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeeeehhhhhhhhhhh.hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..ee.....ee.....eeeeeeeee...eeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------- Transcript
                 4jm7 C  -2 SNAMIHGIGVDLIEIDRIQALYSKQPKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKALGTGLGKHVAFNDIDCYNDELGKPKIDYEGFIVHVSISHTEHYAMSQVVLEKSAF 119
                                     7        17        27        37        47        57        67        77        87        97       107       117
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 3)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4JM7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4JM7)

(-) Gene Ontology  (8, 8)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ACPS_STAAC | Q5HED0: 4dxe 5cxd

(-) Related Entries Specified in the PDB File

3f09 1.82 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF HOLO-(ACYL-CARRIER- PROTEIN) SYNTHASE (ACPS) FROM STAPHYLOCOCCUS AUREUS RELATED ID: CSGID-IDP00816 RELATED DB: TARGETTRACK