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(-) Description

Title :  CO-BOUND FORM OF CUPRIAVIDUS METALLIDURANS CH34 CNRXS
 
Authors :  J. Trepreau, E. Girard, A. P. Maillard, E. De Rosny, I. Petit-Haertlei J. Coves
Date :  20 Dec 10  (Deposition) - 30 Mar 11  (Release) - 27 Apr 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.55
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Trepreau, E. Girard, A. P. Maillard, E. De Rosny, I. Petit-Haertlein, R. Kahn, J. Coves
Structural Basis For Metal Sensing By Cnrx.
J. Mol. Biol. V. 408 766 2011
PubMed-ID: 21414325  |  Reference-DOI: 10.1016/J.JMB.2011.03.014
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - NICKEL AND COBALT RESISTANCE PROTEIN CNRR
    Atcc: 43123
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PET30
    Expression System Vector Type: PLASMID
    Fragment: METAL-SENSOR DOMAIN, RESIDUES 31-148
    Organism Scientific: CUPRIAVIDUS METALLIDURANS
    Organism Taxid: 266264
    Strain: CH34
    Synonym: NICKEL AND COBALT RESISTANCE PROTEIN CNRX

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 4)

Asymmetric Unit (2, 4)
No.NameCountTypeFull Name
1CO1Ligand/IonCOBALT (II) ION
2GOL3Ligand/IonGLYCEROL
Biological Unit 1 (1, 6)
No.NameCountTypeFull Name
1CO-1Ligand/IonCOBALT (II) ION
2GOL6Ligand/IonGLYCEROL

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:42 , HIS A:46 , GLU A:63 , HIS A:119 , MET A:123BINDING SITE FOR RESIDUE CO A1149
2AC2SOFTWAREPRO A:50 , LEU A:51 , LYS A:90 , GLU A:97 , HOH A:2004 , HOH A:2094 , HOH A:2146 , HOH A:2147BINDING SITE FOR RESIDUE GOL A1150
3AC3SOFTWAREGLU A:55 , GLY A:126 , LYS A:128 , PRO A:129 , ILE A:140 , ARG A:144 , HOH A:2149 , HOH A:2150 , HOH A:2151 , HOH A:2152BINDING SITE FOR RESIDUE GOL A1151
4AC4SOFTWAREASP A:64 , PRO A:96 , HOH A:2044BINDING SITE FOR RESIDUE GOL A1152

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

(no "Exon" information available for 2Y3B)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:111
 aligned with CNRR_CUPMC | P37975 from UniProtKB/Swiss-Prot  Length:148

    Alignment length:111
                                    47        57        67        77        87        97       107       117       127       137       147 
           CNRR_CUPMC    38 HGDLHEILHEAVPLDANEREILELKEDAFAQRRREIETRLRAANGKLADAIAKNPAWSPEVEAATQEVERAAGDLQRATLVHVFEMRAGLKPEHRPAYDRVLIDALRRGSQ 148
               SCOP domains --------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------- Transcript
                 2y3b A  38 HGDLHEILHEAVPLDANEREILELKEDAFAQRRREIETRLRAANGKLADAIAKNPAWSPEVEAATQEVERAAGDLQRATLVHVFEMRAGLKPEHRPAYDRVLIDALRRGSQ 148
                                    47        57        67        77        87        97       107       117       127       137       147
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2Y3B)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2Y3B)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A   (CNRR_CUPMC | P37975)
cellular component
    GO:0042597    periplasmic space    The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CNRR_CUPMC | P37975: 2y39 2y3d 2y3g 2y3h 3epv 3zg1 4wwb 4wwd 4wwf

(-) Related Entries Specified in the PDB File

2y39 NI-BOUND FORM OF CUPRIAVIDUS METALLIDURANS CH34 CNRXS
2y3d ZN-BOUND FORM OF CUPRIAVIDUS METALLIDURANS CH34 CNRXS
2y3g SE-MET FORM OF CUPRIAVIDUS METALLIDURANS CH34 CNRXS
2y3h E63Q MUTANT OF CUPRIAVIDUS METALLIDURANS CH34 CNRXS