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(-) Description

Title :  X-RAY STRUCTURE OF ACID-BETA-GLUCOSIDASE WITH N-OCTYL( CYCLIC GUANIDINE)-NOJIRIMYCIN IN THE ACTIVE SITE
 
Authors :  B. Brumshtein, M. Aguilar, M. I. Garcia-Moreno, C. O. Mellet, J. M. Garcia-Fernandez, I. Silman, Y. Shaaltiel, D. Aviezer, J. L. Sussman, A. H. Futerman
Date :  12 Mar 09  (Deposition) - 24 Nov 09  (Release) - 24 Nov 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Lipid Metabolism, Glucocerebrosidase, Membrane, Lysosome, Hydrolase, Glucosidase, Glycoprotein, Gaucher Disease, Sphingolipid Metabolism (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  B. Brumshtein, M. Aguilar-Moncayo, M. I. Garcia-Moreno, C. Ortiz Mellet, J. M. Garcia Fernandez, I. Silman, Y. Shaaltiel, D. Aviezer, J. L. Sussman, A. H. Futerman
6-Amino-6-Deoxy-5, 6-Di-N-(N'- Octyliminomethylidene)Nojirimycin: Synthesis, Biological Evaluation, And Crystal Structure In Complex With Acid Beta-Glucosidase.
Chembiochem V. 10 1480 2009
PubMed-ID: 19437524  |  Reference-DOI: 10.1002/CBIC.200900142

(-) Compounds

Molecule 1 - GLUCOSYLCERAMIDASE
    ChainsA, B
    EC Number3.2.1.45
    EngineeredYES
    Expression SystemDAUCUS CAROTA
    Expression System Taxid4039
    FragmentRESIDUES 40-536
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit AB
Biological Unit 1 (1x)A 
Biological Unit 2 (1x) B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 24)

Asymmetric Unit (6, 24)
No.NameCountTypeFull Name
1CL2Ligand/IonCHLORIDE ION
2FU42Ligand/Ion2,6-ANHYDRO-1-DEOXY-D-GALACTITOL
3MAN2Ligand/IonALPHA-D-MANNOSE
4MT52Ligand/Ion(3E,5R,6R,7S,8R,8AR)-3-(OCTYLIMINO)OCTAHYDROIMIDAZO[1,5-A]PYRIDINE-5,6,7,8-TETROL
5NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
6SO412Ligand/IonSULFATE ION
Biological Unit 1 (5, 11)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2FU41Ligand/Ion2,6-ANHYDRO-1-DEOXY-D-GALACTITOL
3MAN1Ligand/IonALPHA-D-MANNOSE
4MT51Ligand/Ion(3E,5R,6R,7S,8R,8AR)-3-(OCTYLIMINO)OCTAHYDROIMIDAZO[1,5-A]PYRIDINE-5,6,7,8-TETROL
5NAG2Ligand/IonN-ACETYL-D-GLUCOSAMINE
6SO46Ligand/IonSULFATE ION
Biological Unit 2 (5, 11)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2FU41Ligand/Ion2,6-ANHYDRO-1-DEOXY-D-GALACTITOL
3MAN1Ligand/IonALPHA-D-MANNOSE
4MT51Ligand/Ion(3E,5R,6R,7S,8R,8AR)-3-(OCTYLIMINO)OCTAHYDROIMIDAZO[1,5-A]PYRIDINE-5,6,7,8-TETROL
5NAG2Ligand/IonN-ACETYL-D-GLUCOSAMINE
6SO46Ligand/IonSULFATE ION

(-) Sites  (20, 20)

Asymmetric Unit (20, 20)
No.NameEvidenceResiduesDescription
01AC1SOFTWARENAG A:1499 , NAG A:1500 , HOH A:2362BINDING SITE FOR RESIDUE FU4 A1502
02AC2SOFTWARENAG B:1498BINDING SITE FOR RESIDUE FU4 B1501
03AC3SOFTWARETYR A:11 , SER A:12 , ARG A:353 , SER A:356 , ASP A:358BINDING SITE FOR RESIDUE SO4 A1503
04AC4SOFTWARETYR B:11 , SER B:12 , ARG B:353 , SER B:356 , TRP B:357 , ASP B:358 , HOH B:2359BINDING SITE FOR RESIDUE SO4 B1502
05AC5SOFTWARELYS A:79 , TRP A:228 , ARG A:277 , HIS A:306 , HOH A:2313 , HOH A:2364BINDING SITE FOR RESIDUE SO4 A1504
06AC6SOFTWARELYS B:79 , TRP B:228 , ARG B:277 , HIS B:306 , HOH B:2360BINDING SITE FOR RESIDUE SO4 B1503
07AC7SOFTWAREGLY A:193 , LYS A:194 , SER A:242 , GLY A:243 , HOH A:2365 , HOH A:2366BINDING SITE FOR RESIDUE SO4 A1505
08AC8SOFTWAREARG A:44 , SER A:45 , HOH A:2047BINDING SITE FOR RESIDUE SO4 A1506
09AC9SOFTWAREGLY B:193 , LYS B:194 , SER B:242 , GLY B:243 , HOH B:2363BINDING SITE FOR RESIDUE SO4 B1504
10BC1SOFTWAREGLU B:254 , ARG B:257 , HOH B:2200 , HOH B:2366BINDING SITE FOR RESIDUE SO4 B1505
11BC2SOFTWAREARG B:44 , SER B:45 , HOH B:2044 , HOH B:2367BINDING SITE FOR RESIDUE SO4 B1506
12BC3SOFTWAREGLU A:254 , ARG A:257BINDING SITE FOR RESIDUE SO4 A1507
13BC4SOFTWAREGLU B:111 , GLN B:169 , ARG B:170 , LYS B:425 , HOH B:2368BINDING SITE FOR RESIDUE SO4 B1507
14BC5SOFTWAREARG A:44 , TYR A:487BINDING SITE FOR RESIDUE SO4 A1508
15BC6SOFTWAREASP B:127 , PHE B:128 , TRP B:179 , ASN B:234 , GLU B:235 , PHE B:246 , TYR B:313 , GLU B:340 , CYS B:342 , SER B:345 , TRP B:381 , HOH B:2262 , HOH B:2372BINDING SITE FOR RESIDUE MT5 B1508
16BC7SOFTWAREASP A:127 , PHE A:128 , TRP A:179 , ASN A:234 , GLU A:235 , PHE A:246 , TYR A:313 , GLU A:340 , SER A:345 , TRP A:381 , HOH A:2300 , HOH A:2369BINDING SITE FOR RESIDUE MT5 A1509
17BC8SOFTWAREARG A:353BINDING SITE FOR RESIDUE CL A1510
18BC9SOFTWAREPHE B:26 , LYS B:413BINDING SITE FOR RESIDUE CL B1509
19CC1SOFTWAREASN A:19 , THR A:21 , FU4 A:1502 , HOH A:2359 , HOH A:2360 , HOH A:2361BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 19 RESIDUES 1499 TO 1501
20CC2SOFTWAREASN B:19 , THR B:21 , TYR B:22 , FU4 B:1501 , HOH B:2019 , HOH B:2354 , HOH B:2355 , HOH B:2356 , HOH B:2358BINDING SITE FOR CHAIN B OF RESIDUES 1498 TO 1500

(-) SS Bonds  (4, 4)

Asymmetric Unit
No.Residues
1A:4 -A:16
2A:18 -A:23
3B:4 -B:16
4B:18 -B:23

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Leu A:288 -Pro A:289
2Gly A:390 -Pro A:391
3Leu B:288 -Pro B:289
4Gly B:390 -Pro B:391

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (156, 312)

Asymmetric Unit (156, 312)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
001UniProtVAR_063066K46EGLCM_HUMANPolymorphism142761046A/BK7E
002UniProtVAR_003255V54LGLCM_HUMANDisease (GD)121908302A/BV15L
003UniProtVAR_032394C55SGLCM_HUMANDisease (GD)773007510A/BC16S
004UniProtVAR_032395D63NGLCM_HUMANDisease (GD1)  ---A/BD24N
005UniProtVAR_003256F76VGLCM_HUMANDisease (GD)  ---A/BF37V
006UniProtVAR_009033E80KGLCM_HUMANDisease (GD2)1141808A/BE41K
007UniProtVAR_003257T82IGLCM_HUMANDisease (GD)1141811A/BT43I
008UniProtVAR_003258G85EGLCM_HUMANDisease (GD)77829017A/BG46E
009UniProtVAR_032197R87QGLCM_HUMANDisease (GD)78769774A/BR48Q
010UniProtVAR_003259R87WGLCM_HUMANDisease (GD)1141814A/BR48W
011UniProtVAR_032396M92TGLCM_HUMANPolymorphism3205619A/BM53T
012UniProtVAR_003260K118NGLCM_HUMANDisease (GD)121908312A/BK79N
013UniProtVAR_032397A129TGLCM_HUMANDisease (GD)  ---A/BA90T
014UniProtVAR_009034S146LGLCM_HUMANDisease (GD)758447515A/BS107L
015UniProtVAR_003261G152EGLCM_HUMANDisease (GD)  ---A/BG113E
016UniProtVAR_032398N156DGLCM_HUMANDisease (GD)  ---A/BN117D
017UniProtVAR_032399I158SGLCM_HUMANDisease (GD1)77834747A/BI119S
018UniProtVAR_003262I158TGLCM_HUMANDisease (GD)  ---A/BI119T
019UniProtVAR_003263R159QGLCM_HUMANDisease (GD)79653797A/BR120Q
020UniProtVAR_003264R159WGLCM_HUMANDisease (GD)397515515A/BR120W
021UniProtVAR_032198P161LGLCM_HUMANDisease (GD)79637617A/BP122L
022UniProtVAR_003265P161SGLCM_HUMANDisease (GD)121908299A/BP122S
023UniProtVAR_032199M162VGLCM_HUMANDisease (GD)377325220A/BM123V
024UniProtVAR_032200D166VGLCM_HUMANDisease (GD)79796061A/BD127V
025UniProtVAR_009035R170CGLCM_HUMANDisease (GD2)398123530A/BR131C
026UniProtVAR_009036R170LGLCM_HUMANDisease (GD)80356763A/BR131L
027UniProtVAR_032400T173IGLCM_HUMANDisease (GD)78657146A/BT134I
028UniProtVAR_003266T173PGLCM_HUMANDisease (GD)  ---A/BT134P
029UniProtVAR_032401A175EGLCM_HUMANDisease (GD)79660787A/BA136E
030UniProtVAR_003267D179HGLCM_HUMANDisease (GD)147138516A/BD140H
031UniProtVAR_003268K196QGLCM_HUMANDisease (GD)121908297A/BK157Q
032UniProtVAR_009037P198LGLCM_HUMANDisease (GD)80222298A/BP159L
033UniProtVAR_032402P198TGLCM_HUMANDisease (GD)  ---A/BP159T
034UniProtVAR_032201I200NGLCM_HUMANDisease (GD)77933015A/BI161N
035UniProtVAR_010059I200SGLCM_HUMANDisease (GD)77933015A/BI161S
036UniProtVAR_032403H201PGLCM_HUMANDisease (GD)76500263A/BH162P
037UniProtVAR_032404R209CGLCM_HUMANDisease (GD)398123532A/BR170C
038UniProtVAR_003269R209PGLCM_HUMANDisease (GD)  ---A/BR170P
039UniProtVAR_032202L213FGLCM_HUMANDisease (GD)374591570A/BL174F
040UniProtVAR_003270A215DGLCM_HUMANDisease (GD)  ---A/BA176D
041UniProtVAR_003271P217SGLCM_HUMANDisease (GD)  ---A/BP178S
042UniProtVAR_032405P221LGLCM_HUMANDisease (GD1)80205046A/BP182L
043UniProtVAR_003272P221TGLCM_HUMANDisease (GD)866075757A/BP182T
044UniProtVAR_003273W223RGLCM_HUMANDisease (GD)61748906A/BW184R
045UniProtVAR_032203L224FGLCM_HUMANDisease (GD)  ---A/BL185F
046UniProtVAR_003275N227KGLCM_HUMANDisease (GD)381418A/BN188K
047UniProtVAR_003274N227SGLCM_HUMANDisease (GD)364897A/BN188S
048UniProtVAR_010060G228VGLCM_HUMANDisease (GD)78911246A/BG189V
049UniProtVAR_009038A229EGLCM_HUMANDisease (GD)75636769A/BA190E
050UniProtVAR_032406A229TGLCM_HUMANDisease (GD)  ---A/BA190T
051UniProtVAR_032407V230EGLCM_HUMANDisease (GD1)381427A/BV191E
052UniProtVAR_003276V230GGLCM_HUMANDisease (GD1)381427A/BV191G
053UniProtVAR_032204G232EGLCM_HUMANDisease (GD)  ---A/BG193E
054UniProtVAR_003277G234EGLCM_HUMANDisease (GD)74462743A/BG195E
055UniProtVAR_009039G234WGLCM_HUMANDisease (GD)  ---A/BG195W
056UniProtVAR_003278S235PGLCM_HUMANDisease (GD)1064644A/BS196P
057UniProtVAR_032205K237EGLCM_HUMANDisease (GD)773409311A/BK198E
058UniProtVAR_010061G241EGLCM_HUMANDisease (GD)77451368A/BG202E
059UniProtVAR_003279G241RGLCM_HUMANDisease (GD)398123534A/BG202R
060UniProtVAR_010062Y244CGLCM_HUMANDisease (GD)76026102A/BY205C
061UniProtVAR_003280Y251HGLCM_HUMANDisease (GD)121908300A/BY212H
062UniProtVAR_003281F252IGLCM_HUMANDisease (GD)381737A/BF213I
063UniProtVAR_003282F255YGLCM_HUMANDisease (GD)74500255A/BF216Y
064UniProtVAR_032408T270RGLCM_HUMANDisease (GD)76725886A/BT231R
065UniProtVAR_003283S276PGLCM_HUMANDisease (GD)  ---A/BS237P
066UniProtVAR_032409F290LGLCM_HUMANDisease (GD)121908313A/BF251L
067UniProtVAR_009040H294QGLCM_HUMANDisease (GD1)367968666A/BH255Q
068UniProtVAR_003284R296QGLCM_HUMANDisease (GD)78973108A/BR257Q
069UniProtVAR_009041F298LGLCM_HUMANDisease (GD)  ---A/BF259L
070UniProtVAR_032206L303IGLCM_HUMANDisease (GD)  ---A/BL264I
071UniProtVAR_010063G304DGLCM_HUMANDisease (GD)80116658A/BG265D
072UniProtVAR_003285P305RGLCM_HUMANDisease (GD)79215220A/BP266R
073UniProtVAR_032410S310GGLCM_HUMANPolymorphism1057942A/BS271G
074UniProtVAR_010064S310NGLCM_HUMANDisease (GD)74731340A/BS271N
075UniProtVAR_003286R324CGLCM_HUMANDisease (GD)765633380A/BR285C
076UniProtVAR_009042R324HGLCM_HUMANDisease (GD)79696831A/BR285H
077UniProtVAR_003287P328LGLCM_HUMANDisease (GD)121908298A/BP289L
078UniProtVAR_003288K342IGLCM_HUMANDisease (GD)77714449A/BK303I
079UniProtVAR_009043Y343CGLCM_HUMANDisease (GD)77321207A/BY304C
080UniProtVAR_003289A348VGLCM_HUMANDisease (GD)78396650A/BA309V
081UniProtVAR_009044H350RGLCM_HUMANPolymorphism78198234A/BH311R
082UniProtVAR_003290W351CGLCM_HUMANDisease (GD)121908304A/BW312C
083UniProtVAR_003291Y352HGLCM_HUMANDisease (GD)  ---A/BY313H
084UniProtVAR_003292D354HGLCM_HUMANDisease (GD)398123526A/BD315H
085UniProtVAR_003293A357DGLCM_HUMANDisease (GD)78188205A/BA318D
086UniProtVAR_003294T362IGLCM_HUMANDisease (GD)76539814A/BT323I
087UniProtVAR_003295L363PGLCM_HUMANUnclassified (GD)  ---A/BL324P
088UniProtVAR_003296G364RGLCM_HUMANDisease (GD)121908305A/BG325R
089UniProtVAR_003297E365KGLCM_HUMANDisease (GD)2230288A/BE326K
090UniProtVAR_032411R368HGLCM_HUMANPolymorphism1064648A/BR329H
091UniProtVAR_009045A380TGLCM_HUMANDisease (GD)781306264A/BA341T
092UniProtVAR_003298C381GGLCM_HUMANDisease (GD)121908306A/BC342G
093UniProtVAR_032207E388KGLCM_HUMANDisease (GD)  ---A/BE349K
094UniProtVAR_010065V391LGLCM_HUMANDisease (GD)398123527A/BV352L
095UniProtVAR_010066R392GGLCM_HUMANDisease (GD)121908308A/BR353G
096UniProtVAR_032208R392WGLCM_HUMANDisease (GD)  ---A/BR353W
097UniProtVAR_003299R398QGLCM_HUMANDisease (GD)74979486A/BR359Q
098UniProtVAR_032412M400IGLCM_HUMANDisease (GD)149487315A/BM361I
099UniProtVAR_032209Y402CGLCM_HUMANDisease (GD)76228122A/BY363C
100UniProtVAR_003300S403TGLCM_HUMANDisease (GD)121908307A/BS364T
101UniProtVAR_010067S405GGLCM_HUMANDisease (GD)  ---A/BS366G
102UniProtVAR_009046S405NGLCM_HUMANDisease (GD)  ---A/BS366N
103UniProtVAR_003301T408MGLCM_HUMANDisease (GD)2230289A/BT369M
104UniProtVAR_003302N409SGLCM_HUMANDisease (GD1)76763715A/BN370S
105UniProtVAR_032210L410VGLCM_HUMANDisease (GD)121908314A/BL371V
106UniProtVAR_010068V414LGLCM_HUMANDisease (GD)398123528A/BV375L
107UniProtVAR_003303G416SGLCM_HUMANDisease (GD)121908311A/BG377S
108UniProtVAR_003304W417GGLCM_HUMANDisease (GD)  ---A/BW378G
109UniProtVAR_003305D419AGLCM_HUMANDisease (GD)77284004A/BD380A
110UniProtVAR_032211D419HGLCM_HUMANDisease (GD)  ---A/BD380H
111UniProtVAR_003306D419NGLCM_HUMANDisease (GD)  ---A/BD380N
112UniProtVAR_032212N421KGLCM_HUMANDisease (GD)  ---A/BN382K
113UniProtVAR_010069P426LGLCM_HUMANDisease (GD)  ---A/BP387L
114UniProtVAR_003307G428EGLCM_HUMANDisease (GD)  ---A/BG389E
115UniProtVAR_032213G429RGLCM_HUMANDisease (GD)  ---A/BG390R
116UniProtVAR_003308P430LGLCM_HUMANDisease (GD)76910485A/BP391L
117UniProtVAR_003309N431IGLCM_HUMANDisease (GD)77738682A/BN392I
118UniProtVAR_009047W432RGLCM_HUMANDisease (GD)  ---A/BW393R
119UniProtVAR_003310V433LGLCM_HUMANDisease (GD)80356769A/BV394L
120UniProtVAR_003311N435TGLCM_HUMANDisease (GD1)75385858A/BN396T
121UniProtVAR_032214F436SGLCM_HUMANDisease (GD)75243000A/BF397S
122UniProtVAR_009048V437FGLCM_HUMANPolymorphism121908310A/BV398F
123UniProtVAR_010070V437LGLCM_HUMANDisease (GD3)  ---A/BV398L
124UniProtVAR_003312D438NGLCM_HUMANDisease (GD)  ---A/BD399N
125UniProtVAR_032413D438YGLCM_HUMANDisease (GD)  ---A/BD399Y
126UniProtVAR_010071P440LGLCM_HUMANDisease (GD1)74598136A/BP401L
127UniProtVAR_032414I441FGLCM_HUMANDisease (GD)  ---A/BI402F
128UniProtVAR_010072I441TGLCM_HUMANDisease (GD)75564605A/BI402T
129UniProtVAR_003313D448HGLCM_HUMANDisease (GD)1064651A/BD409H
130UniProtVAR_003314D448VGLCM_HUMANDisease (GD)77369218A/BD409V
131UniProtVAR_010073F450IGLCM_HUMANDisease (GD)  ---A/BF411I
132UniProtVAR_003315Y451HGLCM_HUMANDisease (GD)  ---A/BY412H
133UniProtVAR_010074K452QGLCM_HUMANDisease (GD)  ---A/BK413Q
134UniProtVAR_003316P454RGLCM_HUMANDisease (GD)121908295A/BP415R
135UniProtVAR_032215M455VGLCM_HUMANDisease (GD)  ---A/BM416V
136UniProtVAR_003317F456VGLCM_HUMANDisease (GD)  ---A/BF417V
137UniProtVAR_003318Y457CGLCM_HUMANDisease (GD)74752878A/BY418C
138UniProtVAR_032415G460DGLCM_HUMANDisease (GD1)  ---A/BG421D
139UniProtVAR_003319K464EGLCM_HUMANDisease (GD)  ---A/BK425E
140UniProtVAR_063067D482NGLCM_HUMANPolymorphism75671029A/BD443N
141UniProtVAR_003321L483PGLCM_HUMANDisease (GD2)421016A/BL444P
142UniProtVAR_003320L483RGLCM_HUMANDisease (GD)421016A/BL444R
143UniProtVAR_003322A485PGLCM_HUMANDisease (GD)  ---A/BA446P
144UniProtVAR_032416H490RGLCM_HUMANDisease (GD)76071730A/BH451R
145UniProtVAR_003323A495PGLCM_HUMANDisease (GD)368060A/BA456P
146UniProtVAR_063068V497LGLCM_HUMANPolymorphism  ---A/BV458L
147UniProtVAR_032216L500PGLCM_HUMANDisease (GD)  ---A/BL461P
148UniProtVAR_009049N501KGLCM_HUMANDisease (GD)  ---A/BN462K
149UniProtVAR_003324R502CGLCM_HUMANDisease (GD)80356771A/BR463C
150UniProtVAR_032217R502PGLCM_HUMANDisease (GD)  ---A/BR463P
151UniProtVAR_003325L509PGLCM_HUMANPolymorphism  ---A/BL470P
152UniProtVAR_009050D513YGLCM_HUMANDisease (GD2)  ---A/BD474Y
153UniProtVAR_003326G517SGLCM_HUMANDisease (GD)121908301A/BG478S
154UniProtVAR_010075T530IGLCM_HUMANDisease (GD3)78016673A/BT491I
155UniProtVAR_003327R535CGLCM_HUMANDisease (GD)747506979A/BR496C
156UniProtVAR_003328R535HGLCM_HUMANDisease (GD)75822236A/BR496H

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (156, 156)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
001UniProtVAR_063066K46EGLCM_HUMANPolymorphism142761046AK7E
002UniProtVAR_003255V54LGLCM_HUMANDisease (GD)121908302AV15L
003UniProtVAR_032394C55SGLCM_HUMANDisease (GD)773007510AC16S
004UniProtVAR_032395D63NGLCM_HUMANDisease (GD1)  ---AD24N
005UniProtVAR_003256F76VGLCM_HUMANDisease (GD)  ---AF37V
006UniProtVAR_009033E80KGLCM_HUMANDisease (GD2)1141808AE41K
007UniProtVAR_003257T82IGLCM_HUMANDisease (GD)1141811AT43I
008UniProtVAR_003258G85EGLCM_HUMANDisease (GD)77829017AG46E
009UniProtVAR_032197R87QGLCM_HUMANDisease (GD)78769774AR48Q
010UniProtVAR_003259R87WGLCM_HUMANDisease (GD)1141814AR48W
011UniProtVAR_032396M92TGLCM_HUMANPolymorphism3205619AM53T
012UniProtVAR_003260K118NGLCM_HUMANDisease (GD)121908312AK79N
013UniProtVAR_032397A129TGLCM_HUMANDisease (GD)  ---AA90T
014UniProtVAR_009034S146LGLCM_HUMANDisease (GD)758447515AS107L
015UniProtVAR_003261G152EGLCM_HUMANDisease (GD)  ---AG113E
016UniProtVAR_032398N156DGLCM_HUMANDisease (GD)  ---AN117D
017UniProtVAR_032399I158SGLCM_HUMANDisease (GD1)77834747AI119S
018UniProtVAR_003262I158TGLCM_HUMANDisease (GD)  ---AI119T
019UniProtVAR_003263R159QGLCM_HUMANDisease (GD)79653797AR120Q
020UniProtVAR_003264R159WGLCM_HUMANDisease (GD)397515515AR120W
021UniProtVAR_032198P161LGLCM_HUMANDisease (GD)79637617AP122L
022UniProtVAR_003265P161SGLCM_HUMANDisease (GD)121908299AP122S
023UniProtVAR_032199M162VGLCM_HUMANDisease (GD)377325220AM123V
024UniProtVAR_032200D166VGLCM_HUMANDisease (GD)79796061AD127V
025UniProtVAR_009035R170CGLCM_HUMANDisease (GD2)398123530AR131C
026UniProtVAR_009036R170LGLCM_HUMANDisease (GD)80356763AR131L
027UniProtVAR_032400T173IGLCM_HUMANDisease (GD)78657146AT134I
028UniProtVAR_003266T173PGLCM_HUMANDisease (GD)  ---AT134P
029UniProtVAR_032401A175EGLCM_HUMANDisease (GD)79660787AA136E
030UniProtVAR_003267D179HGLCM_HUMANDisease (GD)147138516AD140H
031UniProtVAR_003268K196QGLCM_HUMANDisease (GD)121908297AK157Q
032UniProtVAR_009037P198LGLCM_HUMANDisease (GD)80222298AP159L
033UniProtVAR_032402P198TGLCM_HUMANDisease (GD)  ---AP159T
034UniProtVAR_032201I200NGLCM_HUMANDisease (GD)77933015AI161N
035UniProtVAR_010059I200SGLCM_HUMANDisease (GD)77933015AI161S
036UniProtVAR_032403H201PGLCM_HUMANDisease (GD)76500263AH162P
037UniProtVAR_032404R209CGLCM_HUMANDisease (GD)398123532AR170C
038UniProtVAR_003269R209PGLCM_HUMANDisease (GD)  ---AR170P
039UniProtVAR_032202L213FGLCM_HUMANDisease (GD)374591570AL174F
040UniProtVAR_003270A215DGLCM_HUMANDisease (GD)  ---AA176D
041UniProtVAR_003271P217SGLCM_HUMANDisease (GD)  ---AP178S
042UniProtVAR_032405P221LGLCM_HUMANDisease (GD1)80205046AP182L
043UniProtVAR_003272P221TGLCM_HUMANDisease (GD)866075757AP182T
044UniProtVAR_003273W223RGLCM_HUMANDisease (GD)61748906AW184R
045UniProtVAR_032203L224FGLCM_HUMANDisease (GD)  ---AL185F
046UniProtVAR_003275N227KGLCM_HUMANDisease (GD)381418AN188K
047UniProtVAR_003274N227SGLCM_HUMANDisease (GD)364897AN188S
048UniProtVAR_010060G228VGLCM_HUMANDisease (GD)78911246AG189V
049UniProtVAR_009038A229EGLCM_HUMANDisease (GD)75636769AA190E
050UniProtVAR_032406A229TGLCM_HUMANDisease (GD)  ---AA190T
051UniProtVAR_032407V230EGLCM_HUMANDisease (GD1)381427AV191E
052UniProtVAR_003276V230GGLCM_HUMANDisease (GD1)381427AV191G
053UniProtVAR_032204G232EGLCM_HUMANDisease (GD)  ---AG193E
054UniProtVAR_003277G234EGLCM_HUMANDisease (GD)74462743AG195E
055UniProtVAR_009039G234WGLCM_HUMANDisease (GD)  ---AG195W
056UniProtVAR_003278S235PGLCM_HUMANDisease (GD)1064644AS196P
057UniProtVAR_032205K237EGLCM_HUMANDisease (GD)773409311AK198E
058UniProtVAR_010061G241EGLCM_HUMANDisease (GD)77451368AG202E
059UniProtVAR_003279G241RGLCM_HUMANDisease (GD)398123534AG202R
060UniProtVAR_010062Y244CGLCM_HUMANDisease (GD)76026102AY205C
061UniProtVAR_003280Y251HGLCM_HUMANDisease (GD)121908300AY212H
062UniProtVAR_003281F252IGLCM_HUMANDisease (GD)381737AF213I
063UniProtVAR_003282F255YGLCM_HUMANDisease (GD)74500255AF216Y
064UniProtVAR_032408T270RGLCM_HUMANDisease (GD)76725886AT231R
065UniProtVAR_003283S276PGLCM_HUMANDisease (GD)  ---AS237P
066UniProtVAR_032409F290LGLCM_HUMANDisease (GD)121908313AF251L
067UniProtVAR_009040H294QGLCM_HUMANDisease (GD1)367968666AH255Q
068UniProtVAR_003284R296QGLCM_HUMANDisease (GD)78973108AR257Q
069UniProtVAR_009041F298LGLCM_HUMANDisease (GD)  ---AF259L
070UniProtVAR_032206L303IGLCM_HUMANDisease (GD)  ---AL264I
071UniProtVAR_010063G304DGLCM_HUMANDisease (GD)80116658AG265D
072UniProtVAR_003285P305RGLCM_HUMANDisease (GD)79215220AP266R
073UniProtVAR_032410S310GGLCM_HUMANPolymorphism1057942AS271G
074UniProtVAR_010064S310NGLCM_HUMANDisease (GD)74731340AS271N
075UniProtVAR_003286R324CGLCM_HUMANDisease (GD)765633380AR285C
076UniProtVAR_009042R324HGLCM_HUMANDisease (GD)79696831AR285H
077UniProtVAR_003287P328LGLCM_HUMANDisease (GD)121908298AP289L
078UniProtVAR_003288K342IGLCM_HUMANDisease (GD)77714449AK303I
079UniProtVAR_009043Y343CGLCM_HUMANDisease (GD)77321207AY304C
080UniProtVAR_003289A348VGLCM_HUMANDisease (GD)78396650AA309V
081UniProtVAR_009044H350RGLCM_HUMANPolymorphism78198234AH311R
082UniProtVAR_003290W351CGLCM_HUMANDisease (GD)121908304AW312C
083UniProtVAR_003291Y352HGLCM_HUMANDisease (GD)  ---AY313H
084UniProtVAR_003292D354HGLCM_HUMANDisease (GD)398123526AD315H
085UniProtVAR_003293A357DGLCM_HUMANDisease (GD)78188205AA318D
086UniProtVAR_003294T362IGLCM_HUMANDisease (GD)76539814AT323I
087UniProtVAR_003295L363PGLCM_HUMANUnclassified (GD)  ---AL324P
088UniProtVAR_003296G364RGLCM_HUMANDisease (GD)121908305AG325R
089UniProtVAR_003297E365KGLCM_HUMANDisease (GD)2230288AE326K
090UniProtVAR_032411R368HGLCM_HUMANPolymorphism1064648AR329H
091UniProtVAR_009045A380TGLCM_HUMANDisease (GD)781306264AA341T
092UniProtVAR_003298C381GGLCM_HUMANDisease (GD)121908306AC342G
093UniProtVAR_032207E388KGLCM_HUMANDisease (GD)  ---AE349K
094UniProtVAR_010065V391LGLCM_HUMANDisease (GD)398123527AV352L
095UniProtVAR_010066R392GGLCM_HUMANDisease (GD)121908308AR353G
096UniProtVAR_032208R392WGLCM_HUMANDisease (GD)  ---AR353W
097UniProtVAR_003299R398QGLCM_HUMANDisease (GD)74979486AR359Q
098UniProtVAR_032412M400IGLCM_HUMANDisease (GD)149487315AM361I
099UniProtVAR_032209Y402CGLCM_HUMANDisease (GD)76228122AY363C
100UniProtVAR_003300S403TGLCM_HUMANDisease (GD)121908307AS364T
101UniProtVAR_010067S405GGLCM_HUMANDisease (GD)  ---AS366G
102UniProtVAR_009046S405NGLCM_HUMANDisease (GD)  ---AS366N
103UniProtVAR_003301T408MGLCM_HUMANDisease (GD)2230289AT369M
104UniProtVAR_003302N409SGLCM_HUMANDisease (GD1)76763715AN370S
105UniProtVAR_032210L410VGLCM_HUMANDisease (GD)121908314AL371V
106UniProtVAR_010068V414LGLCM_HUMANDisease (GD)398123528AV375L
107UniProtVAR_003303G416SGLCM_HUMANDisease (GD)121908311AG377S
108UniProtVAR_003304W417GGLCM_HUMANDisease (GD)  ---AW378G
109UniProtVAR_003305D419AGLCM_HUMANDisease (GD)77284004AD380A
110UniProtVAR_032211D419HGLCM_HUMANDisease (GD)  ---AD380H
111UniProtVAR_003306D419NGLCM_HUMANDisease (GD)  ---AD380N
112UniProtVAR_032212N421KGLCM_HUMANDisease (GD)  ---AN382K
113UniProtVAR_010069P426LGLCM_HUMANDisease (GD)  ---AP387L
114UniProtVAR_003307G428EGLCM_HUMANDisease (GD)  ---AG389E
115UniProtVAR_032213G429RGLCM_HUMANDisease (GD)  ---AG390R
116UniProtVAR_003308P430LGLCM_HUMANDisease (GD)76910485AP391L
117UniProtVAR_003309N431IGLCM_HUMANDisease (GD)77738682AN392I
118UniProtVAR_009047W432RGLCM_HUMANDisease (GD)  ---AW393R
119UniProtVAR_003310V433LGLCM_HUMANDisease (GD)80356769AV394L
120UniProtVAR_003311N435TGLCM_HUMANDisease (GD1)75385858AN396T
121UniProtVAR_032214F436SGLCM_HUMANDisease (GD)75243000AF397S
122UniProtVAR_009048V437FGLCM_HUMANPolymorphism121908310AV398F
123UniProtVAR_010070V437LGLCM_HUMANDisease (GD3)  ---AV398L
124UniProtVAR_003312D438NGLCM_HUMANDisease (GD)  ---AD399N
125UniProtVAR_032413D438YGLCM_HUMANDisease (GD)  ---AD399Y
126UniProtVAR_010071P440LGLCM_HUMANDisease (GD1)74598136AP401L
127UniProtVAR_032414I441FGLCM_HUMANDisease (GD)  ---AI402F
128UniProtVAR_010072I441TGLCM_HUMANDisease (GD)75564605AI402T
129UniProtVAR_003313D448HGLCM_HUMANDisease (GD)1064651AD409H
130UniProtVAR_003314D448VGLCM_HUMANDisease (GD)77369218AD409V
131UniProtVAR_010073F450IGLCM_HUMANDisease (GD)  ---AF411I
132UniProtVAR_003315Y451HGLCM_HUMANDisease (GD)  ---AY412H
133UniProtVAR_010074K452QGLCM_HUMANDisease (GD)  ---AK413Q
134UniProtVAR_003316P454RGLCM_HUMANDisease (GD)121908295AP415R
135UniProtVAR_032215M455VGLCM_HUMANDisease (GD)  ---AM416V
136UniProtVAR_003317F456VGLCM_HUMANDisease (GD)  ---AF417V
137UniProtVAR_003318Y457CGLCM_HUMANDisease (GD)74752878AY418C
138UniProtVAR_032415G460DGLCM_HUMANDisease (GD1)  ---AG421D
139UniProtVAR_003319K464EGLCM_HUMANDisease (GD)  ---AK425E
140UniProtVAR_063067D482NGLCM_HUMANPolymorphism75671029AD443N
141UniProtVAR_003321L483PGLCM_HUMANDisease (GD2)421016AL444P
142UniProtVAR_003320L483RGLCM_HUMANDisease (GD)421016AL444R
143UniProtVAR_003322A485PGLCM_HUMANDisease (GD)  ---AA446P
144UniProtVAR_032416H490RGLCM_HUMANDisease (GD)76071730AH451R
145UniProtVAR_003323A495PGLCM_HUMANDisease (GD)368060AA456P
146UniProtVAR_063068V497LGLCM_HUMANPolymorphism  ---AV458L
147UniProtVAR_032216L500PGLCM_HUMANDisease (GD)  ---AL461P
148UniProtVAR_009049N501KGLCM_HUMANDisease (GD)  ---AN462K
149UniProtVAR_003324R502CGLCM_HUMANDisease (GD)80356771AR463C
150UniProtVAR_032217R502PGLCM_HUMANDisease (GD)  ---AR463P
151UniProtVAR_003325L509PGLCM_HUMANPolymorphism  ---AL470P
152UniProtVAR_009050D513YGLCM_HUMANDisease (GD2)  ---AD474Y
153UniProtVAR_003326G517SGLCM_HUMANDisease (GD)121908301AG478S
154UniProtVAR_010075T530IGLCM_HUMANDisease (GD3)78016673AT491I
155UniProtVAR_003327R535CGLCM_HUMANDisease (GD)747506979AR496C
156UniProtVAR_003328R535HGLCM_HUMANDisease (GD)75822236AR496H

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (156, 156)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
001UniProtVAR_063066K46EGLCM_HUMANPolymorphism142761046BK7E
002UniProtVAR_003255V54LGLCM_HUMANDisease (GD)121908302BV15L
003UniProtVAR_032394C55SGLCM_HUMANDisease (GD)773007510BC16S
004UniProtVAR_032395D63NGLCM_HUMANDisease (GD1)  ---BD24N
005UniProtVAR_003256F76VGLCM_HUMANDisease (GD)  ---BF37V
006UniProtVAR_009033E80KGLCM_HUMANDisease (GD2)1141808BE41K
007UniProtVAR_003257T82IGLCM_HUMANDisease (GD)1141811BT43I
008UniProtVAR_003258G85EGLCM_HUMANDisease (GD)77829017BG46E
009UniProtVAR_032197R87QGLCM_HUMANDisease (GD)78769774BR48Q
010UniProtVAR_003259R87WGLCM_HUMANDisease (GD)1141814BR48W
011UniProtVAR_032396M92TGLCM_HUMANPolymorphism3205619BM53T
012UniProtVAR_003260K118NGLCM_HUMANDisease (GD)121908312BK79N
013UniProtVAR_032397A129TGLCM_HUMANDisease (GD)  ---BA90T
014UniProtVAR_009034S146LGLCM_HUMANDisease (GD)758447515BS107L
015UniProtVAR_003261G152EGLCM_HUMANDisease (GD)  ---BG113E
016UniProtVAR_032398N156DGLCM_HUMANDisease (GD)  ---BN117D
017UniProtVAR_032399I158SGLCM_HUMANDisease (GD1)77834747BI119S
018UniProtVAR_003262I158TGLCM_HUMANDisease (GD)  ---BI119T
019UniProtVAR_003263R159QGLCM_HUMANDisease (GD)79653797BR120Q
020UniProtVAR_003264R159WGLCM_HUMANDisease (GD)397515515BR120W
021UniProtVAR_032198P161LGLCM_HUMANDisease (GD)79637617BP122L
022UniProtVAR_003265P161SGLCM_HUMANDisease (GD)121908299BP122S
023UniProtVAR_032199M162VGLCM_HUMANDisease (GD)377325220BM123V
024UniProtVAR_032200D166VGLCM_HUMANDisease (GD)79796061BD127V
025UniProtVAR_009035R170CGLCM_HUMANDisease (GD2)398123530BR131C
026UniProtVAR_009036R170LGLCM_HUMANDisease (GD)80356763BR131L
027UniProtVAR_032400T173IGLCM_HUMANDisease (GD)78657146BT134I
028UniProtVAR_003266T173PGLCM_HUMANDisease (GD)  ---BT134P
029UniProtVAR_032401A175EGLCM_HUMANDisease (GD)79660787BA136E
030UniProtVAR_003267D179HGLCM_HUMANDisease (GD)147138516BD140H
031UniProtVAR_003268K196QGLCM_HUMANDisease (GD)121908297BK157Q
032UniProtVAR_009037P198LGLCM_HUMANDisease (GD)80222298BP159L
033UniProtVAR_032402P198TGLCM_HUMANDisease (GD)  ---BP159T
034UniProtVAR_032201I200NGLCM_HUMANDisease (GD)77933015BI161N
035UniProtVAR_010059I200SGLCM_HUMANDisease (GD)77933015BI161S
036UniProtVAR_032403H201PGLCM_HUMANDisease (GD)76500263BH162P
037UniProtVAR_032404R209CGLCM_HUMANDisease (GD)398123532BR170C
038UniProtVAR_003269R209PGLCM_HUMANDisease (GD)  ---BR170P
039UniProtVAR_032202L213FGLCM_HUMANDisease (GD)374591570BL174F
040UniProtVAR_003270A215DGLCM_HUMANDisease (GD)  ---BA176D
041UniProtVAR_003271P217SGLCM_HUMANDisease (GD)  ---BP178S
042UniProtVAR_032405P221LGLCM_HUMANDisease (GD1)80205046BP182L
043UniProtVAR_003272P221TGLCM_HUMANDisease (GD)866075757BP182T
044UniProtVAR_003273W223RGLCM_HUMANDisease (GD)61748906BW184R
045UniProtVAR_032203L224FGLCM_HUMANDisease (GD)  ---BL185F
046UniProtVAR_003275N227KGLCM_HUMANDisease (GD)381418BN188K
047UniProtVAR_003274N227SGLCM_HUMANDisease (GD)364897BN188S
048UniProtVAR_010060G228VGLCM_HUMANDisease (GD)78911246BG189V
049UniProtVAR_009038A229EGLCM_HUMANDisease (GD)75636769BA190E
050UniProtVAR_032406A229TGLCM_HUMANDisease (GD)  ---BA190T
051UniProtVAR_032407V230EGLCM_HUMANDisease (GD1)381427BV191E
052UniProtVAR_003276V230GGLCM_HUMANDisease (GD1)381427BV191G
053UniProtVAR_032204G232EGLCM_HUMANDisease (GD)  ---BG193E
054UniProtVAR_003277G234EGLCM_HUMANDisease (GD)74462743BG195E
055UniProtVAR_009039G234WGLCM_HUMANDisease (GD)  ---BG195W
056UniProtVAR_003278S235PGLCM_HUMANDisease (GD)1064644BS196P
057UniProtVAR_032205K237EGLCM_HUMANDisease (GD)773409311BK198E
058UniProtVAR_010061G241EGLCM_HUMANDisease (GD)77451368BG202E
059UniProtVAR_003279G241RGLCM_HUMANDisease (GD)398123534BG202R
060UniProtVAR_010062Y244CGLCM_HUMANDisease (GD)76026102BY205C
061UniProtVAR_003280Y251HGLCM_HUMANDisease (GD)121908300BY212H
062UniProtVAR_003281F252IGLCM_HUMANDisease (GD)381737BF213I
063UniProtVAR_003282F255YGLCM_HUMANDisease (GD)74500255BF216Y
064UniProtVAR_032408T270RGLCM_HUMANDisease (GD)76725886BT231R
065UniProtVAR_003283S276PGLCM_HUMANDisease (GD)  ---BS237P
066UniProtVAR_032409F290LGLCM_HUMANDisease (GD)121908313BF251L
067UniProtVAR_009040H294QGLCM_HUMANDisease (GD1)367968666BH255Q
068UniProtVAR_003284R296QGLCM_HUMANDisease (GD)78973108BR257Q
069UniProtVAR_009041F298LGLCM_HUMANDisease (GD)  ---BF259L
070UniProtVAR_032206L303IGLCM_HUMANDisease (GD)  ---BL264I
071UniProtVAR_010063G304DGLCM_HUMANDisease (GD)80116658BG265D
072UniProtVAR_003285P305RGLCM_HUMANDisease (GD)79215220BP266R
073UniProtVAR_032410S310GGLCM_HUMANPolymorphism1057942BS271G
074UniProtVAR_010064S310NGLCM_HUMANDisease (GD)74731340BS271N
075UniProtVAR_003286R324CGLCM_HUMANDisease (GD)765633380BR285C
076UniProtVAR_009042R324HGLCM_HUMANDisease (GD)79696831BR285H
077UniProtVAR_003287P328LGLCM_HUMANDisease (GD)121908298BP289L
078UniProtVAR_003288K342IGLCM_HUMANDisease (GD)77714449BK303I
079UniProtVAR_009043Y343CGLCM_HUMANDisease (GD)77321207BY304C
080UniProtVAR_003289A348VGLCM_HUMANDisease (GD)78396650BA309V
081UniProtVAR_009044H350RGLCM_HUMANPolymorphism78198234BH311R
082UniProtVAR_003290W351CGLCM_HUMANDisease (GD)121908304BW312C
083UniProtVAR_003291Y352HGLCM_HUMANDisease (GD)  ---BY313H
084UniProtVAR_003292D354HGLCM_HUMANDisease (GD)398123526BD315H
085UniProtVAR_003293A357DGLCM_HUMANDisease (GD)78188205BA318D
086UniProtVAR_003294T362IGLCM_HUMANDisease (GD)76539814BT323I
087UniProtVAR_003295L363PGLCM_HUMANUnclassified (GD)  ---BL324P
088UniProtVAR_003296G364RGLCM_HUMANDisease (GD)121908305BG325R
089UniProtVAR_003297E365KGLCM_HUMANDisease (GD)2230288BE326K
090UniProtVAR_032411R368HGLCM_HUMANPolymorphism1064648BR329H
091UniProtVAR_009045A380TGLCM_HUMANDisease (GD)781306264BA341T
092UniProtVAR_003298C381GGLCM_HUMANDisease (GD)121908306BC342G
093UniProtVAR_032207E388KGLCM_HUMANDisease (GD)  ---BE349K
094UniProtVAR_010065V391LGLCM_HUMANDisease (GD)398123527BV352L
095UniProtVAR_010066R392GGLCM_HUMANDisease (GD)121908308BR353G
096UniProtVAR_032208R392WGLCM_HUMANDisease (GD)  ---BR353W
097UniProtVAR_003299R398QGLCM_HUMANDisease (GD)74979486BR359Q
098UniProtVAR_032412M400IGLCM_HUMANDisease (GD)149487315BM361I
099UniProtVAR_032209Y402CGLCM_HUMANDisease (GD)76228122BY363C
100UniProtVAR_003300S403TGLCM_HUMANDisease (GD)121908307BS364T
101UniProtVAR_010067S405GGLCM_HUMANDisease (GD)  ---BS366G
102UniProtVAR_009046S405NGLCM_HUMANDisease (GD)  ---BS366N
103UniProtVAR_003301T408MGLCM_HUMANDisease (GD)2230289BT369M
104UniProtVAR_003302N409SGLCM_HUMANDisease (GD1)76763715BN370S
105UniProtVAR_032210L410VGLCM_HUMANDisease (GD)121908314BL371V
106UniProtVAR_010068V414LGLCM_HUMANDisease (GD)398123528BV375L
107UniProtVAR_003303G416SGLCM_HUMANDisease (GD)121908311BG377S
108UniProtVAR_003304W417GGLCM_HUMANDisease (GD)  ---BW378G
109UniProtVAR_003305D419AGLCM_HUMANDisease (GD)77284004BD380A
110UniProtVAR_032211D419HGLCM_HUMANDisease (GD)  ---BD380H
111UniProtVAR_003306D419NGLCM_HUMANDisease (GD)  ---BD380N
112UniProtVAR_032212N421KGLCM_HUMANDisease (GD)  ---BN382K
113UniProtVAR_010069P426LGLCM_HUMANDisease (GD)  ---BP387L
114UniProtVAR_003307G428EGLCM_HUMANDisease (GD)  ---BG389E
115UniProtVAR_032213G429RGLCM_HUMANDisease (GD)  ---BG390R
116UniProtVAR_003308P430LGLCM_HUMANDisease (GD)76910485BP391L
117UniProtVAR_003309N431IGLCM_HUMANDisease (GD)77738682BN392I
118UniProtVAR_009047W432RGLCM_HUMANDisease (GD)  ---BW393R
119UniProtVAR_003310V433LGLCM_HUMANDisease (GD)80356769BV394L
120UniProtVAR_003311N435TGLCM_HUMANDisease (GD1)75385858BN396T
121UniProtVAR_032214F436SGLCM_HUMANDisease (GD)75243000BF397S
122UniProtVAR_009048V437FGLCM_HUMANPolymorphism121908310BV398F
123UniProtVAR_010070V437LGLCM_HUMANDisease (GD3)  ---BV398L
124UniProtVAR_003312D438NGLCM_HUMANDisease (GD)  ---BD399N
125UniProtVAR_032413D438YGLCM_HUMANDisease (GD)  ---BD399Y
126UniProtVAR_010071P440LGLCM_HUMANDisease (GD1)74598136BP401L
127UniProtVAR_032414I441FGLCM_HUMANDisease (GD)  ---BI402F
128UniProtVAR_010072I441TGLCM_HUMANDisease (GD)75564605BI402T
129UniProtVAR_003313D448HGLCM_HUMANDisease (GD)1064651BD409H
130UniProtVAR_003314D448VGLCM_HUMANDisease (GD)77369218BD409V
131UniProtVAR_010073F450IGLCM_HUMANDisease (GD)  ---BF411I
132UniProtVAR_003315Y451HGLCM_HUMANDisease (GD)  ---BY412H
133UniProtVAR_010074K452QGLCM_HUMANDisease (GD)  ---BK413Q
134UniProtVAR_003316P454RGLCM_HUMANDisease (GD)121908295BP415R
135UniProtVAR_032215M455VGLCM_HUMANDisease (GD)  ---BM416V
136UniProtVAR_003317F456VGLCM_HUMANDisease (GD)  ---BF417V
137UniProtVAR_003318Y457CGLCM_HUMANDisease (GD)74752878BY418C
138UniProtVAR_032415G460DGLCM_HUMANDisease (GD1)  ---BG421D
139UniProtVAR_003319K464EGLCM_HUMANDisease (GD)  ---BK425E
140UniProtVAR_063067D482NGLCM_HUMANPolymorphism75671029BD443N
141UniProtVAR_003321L483PGLCM_HUMANDisease (GD2)421016BL444P
142UniProtVAR_003320L483RGLCM_HUMANDisease (GD)421016BL444R
143UniProtVAR_003322A485PGLCM_HUMANDisease (GD)  ---BA446P
144UniProtVAR_032416H490RGLCM_HUMANDisease (GD)76071730BH451R
145UniProtVAR_003323A495PGLCM_HUMANDisease (GD)368060BA456P
146UniProtVAR_063068V497LGLCM_HUMANPolymorphism  ---BV458L
147UniProtVAR_032216L500PGLCM_HUMANDisease (GD)  ---BL461P
148UniProtVAR_009049N501KGLCM_HUMANDisease (GD)  ---BN462K
149UniProtVAR_003324R502CGLCM_HUMANDisease (GD)80356771BR463C
150UniProtVAR_032217R502PGLCM_HUMANDisease (GD)  ---BR463P
151UniProtVAR_003325L509PGLCM_HUMANPolymorphism  ---BL470P
152UniProtVAR_009050D513YGLCM_HUMANDisease (GD2)  ---BD474Y
153UniProtVAR_003326G517SGLCM_HUMANDisease (GD)121908301BG478S
154UniProtVAR_010075T530IGLCM_HUMANDisease (GD3)78016673BT491I
155UniProtVAR_003327R535CGLCM_HUMANDisease (GD)747506979BR496C
156UniProtVAR_003328R535HGLCM_HUMANDisease (GD)75822236BR496H

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2WCG)

(-) Exons   (10, 19)

Asymmetric Unit (10, 19)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.3bENST000003683733bENSE00001890492chr1:155211025-155210877149GLCM_HUMAN1-990--
1.4aENST000003683734aENSE00001231103chr1:155210508-15521042188GLCM_HUMAN10-39301-
B:0-0
-
1
1.6cENST000003683736cENSE00001231096chr1:155209868-155209677192GLCM_HUMAN39-103652A:1-64 (gaps)
B:0-64 (gaps)
64
65
1.7bENST000003683737bENSE00001231088chr1:155209553-155209407147GLCM_HUMAN103-152502A:64-113
B:64-113
50
50
1.8eENST000003683738eENSE00001775630chr1:155208441-155208308134GLCM_HUMAN152-196452A:113-157
B:113-157
45
45
1.9bENST000003683739bENSE00001697320chr1:155208097-155207925173GLCM_HUMAN197-254582A:158-215
B:158-215
58
58
1.10ENST0000036837310ENSE00001667013chr1:155207369-155207132238GLCM_HUMAN254-333802A:215-294
B:215-294
80
80
1.11bENST0000036837311bENSE00001231060chr1:155206260-155206036225GLCM_HUMAN334-408752A:295-369
B:295-369
75
75
1.12aENST0000036837312aENSE00001231052chr1:155205635-155205472164GLCM_HUMAN409-463552A:370-424
B:370-424
55
55
1.12dENST0000036837312dENSE00001780706chr1:155205102-155204986117GLCM_HUMAN463-502402A:424-463
B:424-463
40
40
1.13dENST0000036837313dENSE00001917720chr1:155204891-155204243649GLCM_HUMAN502-536352A:463-497
B:463-497
35
35

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:493
 aligned with B2R6A7_HUMAN | B2R6A7 from UniProtKB/TrEMBL  Length:536

    Alignment length:498
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          536 
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529      | 
         B2R6A7_HUMAN    40 ARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHRQ-   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ----2wcgA01 Glycosidases  --------2wcgA02 A:35-77,A:432-498                  2wcgA01 A:5-26,A:78-431 Glycosidases                                                                                                                                                                                                                                                                                                                              2wcgA02 A:35-77,A:432-498 Golgi alpha-mannosidase II                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....ee.......eeee........-----....eeeeeee.......eeeeee.........eeeeeeeeeeeee..eeeee.hhhhhhhhh..hhhhhhhhhhhhhh.......eeeeee..........................hhhhhhhhhhhhhhhhhhh....eeeeee...hhhh.................hhhhhhhhhhhhhhhhhhhh......eee.....hhhhh..........hhhhhhhhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhhhhhhh...eeeeee...............hhhhhhhhhhhhhhhhhh.eeeeeeee...................eeeehhhheeeehhhhhhhhhhhh......eeeeeee.....eeeeeee.....eeeeeee.....eeeeeee...eeeeeee....eeeeee.... Sec.struct. author
             SAPs(SNPs) (1) ------E-------LS-------N------------V---K-I--E-Q----T-------------------------N----------T----------------L-----E---D-SQ-LV---V---C--I-E---H----------------Q-L-NP-------C---F-D-S---L-RF--KVEE-E-EP-E---E--C------HI--Y--------------R-----P-------------L---Q-Q-L----IDR----G-------------C---L-------------IC----V-RCH-H--D----IPRK--H-----------TG------K--LG-----Q-I-CT-G--MSV---L-SG-A-K----L-ERLIRL-TSFN-LF------H-IHQ-RVVC--D---E-----------------NP-P----R----P-L--PKC------P---Y---S------------I----C-- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -----------------------------------------------W----------------------------------------------------------------------TW-S--------L--P------------------------T-S--------P-----------T-----S-TG---W------R--------------------------------------------------------------------N-------------H-------------------------------------------------------------------W------------N-------------H-----------------LY--T------V----------------------------------R------------------P--------------------------------H-- SAPs(SNPs) (2)
             SAPs(SNPs) (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (3)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2wcg A   1 ARPCIPKSFGYSSVVCVCNATYCDSF-----PALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHRQL 498
                                    10        20     |   - |      40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490        
                                                    26    32                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  

Chain A from PDB  Type:PROTEIN  Length:493
 aligned with GLCM_HUMAN | P04062 from UniProtKB/Swiss-Prot  Length:536

    Alignment length:498
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          536 
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529      | 
           GLCM_HUMAN    40 ARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWRRQ-   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ----2wcgA01 Glycosidases  --------2wcgA02 A:35-77,A:432-498                  2wcgA01 A:5-26,A:78-431 Glycosidases                                                                                                                                                                                                                                                                                                                              2wcgA02 A:35-77,A:432-498 Golgi alpha-mannosidase II                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....ee.......eeee........-----....eeeeeee.......eeeeee.........eeeeeeeeeeeee..eeeee.hhhhhhhhh..hhhhhhhhhhhhhh.......eeeeee..........................hhhhhhhhhhhhhhhhhhh....eeeeee...hhhh.................hhhhhhhhhhhhhhhhhhhh......eee.....hhhhh..........hhhhhhhhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhhhhhhh...eeeeee...............hhhhhhhhhhhhhhhhhh.eeeeeeee...................eeeehhhheeeehhhhhhhhhhhh......eeeeeee.....eeeeeee.....eeeeeee.....eeeeeee...eeeeeee....eeeeee.... Sec.struct. author
             SAPs(SNPs) (1) ------E-------LS-------N------------V---K-I--E-Q----T-------------------------N----------T----------------L-----E---D-SQ-LV---V---C--I-E---H----------------Q-L-NP-------C---F-D-S---L-RF--KVEE-E-EP-E---E--C------HI--Y--------------R-----P-------------L---Q-Q-L----IDR----G-------------C---L-------------IC----V-RCH-H--D----IPRK--H-----------TG------K--LG-----Q-I-CT-G--MSV---L-SG-A-K----L-ERLIRL-TSFN-LF------H-IHQ-RVVC--D---E-----------------NP-P----R----P-L--PKC------P---Y---S------------I----C-- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -----------------------------------------------W----------------------------------------------------------------------TW-S--------L--P------------------------T-S--------P-----------T-----S-TG---W------R--------------------------------------------------------------------N-------------H-------------------------------------------------------------------W------------N-------------H-----------------LY--T------V----------------------------------R------------------P--------------------------------H-- SAPs(SNPs) (2)
             SAPs(SNPs) (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (3)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
           Transcript 1 (1) ---------------------------------------------------------------Exon 1.7b  PDB: A:64-113 UniProt: 103-152         -----------------------------------------------------------------------------------------------------Exon 1.10  PDB: A:215-294 UniProt: 254-333                                      Exon 1.11b  PDB: A:295-369 UniProt: 334-408                                Exon 1.12a  PDB: A:370-424 UniProt: 409-463            --------------------------------------Exon 1.13d  PDB: A:463-497         - Transcript 1 (1)
           Transcript 1 (2) Exon 1.6c  PDB: A:1-64 (gaps) UniProt: 39-103 [INCOMPLETE]      ------------------------------------------------Exon 1.8e  PDB: A:113-157 UniProt: 152-196   Exon 1.9b  PDB: A:158-215 UniProt: 197-254                ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.12d  PDB: A:424-463              ----------------------------------- Transcript 1 (2)
                 2wcg A   1 ARPCIPKSFGYSSVVCVCNATYCDSF-----PALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHRQL 498
                                    10        20     |   - |      40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490        
                                                    26    32                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  

Chain B from PDB  Type:PROTEIN  Length:495
 aligned with B2R6A7_HUMAN | B2R6A7 from UniProtKB/TrEMBL  Length:536

    Alignment length:498
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528        
         B2R6A7_HUMAN    39 GARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHRQ 536
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains -----2wcgB01 B:5-28,B:78-431 ------2wcgB02 B:35-77,B:432-497                  2wcgB01 B:5-28,B:78-431 Glycosidases                                                                                                                                                                                                                                                                                                                              2wcgB02 B:35-77,B:432-497 Golgi alpha-mannosidase II               CATH domains
           Pfam domains (1) -Glyco_hydro_30-2wcgB01 B:1-49   4                                                                                                                                                                                                                                                                                                                                                                                                                                                                             --- Pfam domains (1)
           Pfam domains (2) -Glyco_hydro_30-2wcgB02 B:1-49   4                                                                                                                                                                                                                                                                                                                                                                                                                                                                             --- Pfam domains (2)
         Sec.struct. author ......ee.......eeee...........---...eeeeeee.......eeeeee..........eeeeeeeeeeee..eeeee.hhhhhhhhh..hhhhhhhhhhhhhh.......eeeeee..........................hhhhhhhhhhhhhhhhhhh....eeeeee...hhhh.................hhhhhhhhhhhhhhhhhhhh......eee.....hhhhh..........hhhhhhhhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhhhhhhh...eeeeee...............hhhhhhhhhhhhhhhhhh.eeeeeeee...................eeeehhhheeeehhhhhhhhhhhh......eeeeeee.....eeeeeee.....eeeeeee.....eeeeeee...eeeeeee....eeeeee... Sec.struct. author
             SAPs(SNPs) (1) -------E-------LS-------N------------V---K-I--E-Q----T-------------------------N----------T----------------L-----E---D-SQ-LV---V---C--I-E---H----------------Q-L-NP-------C---F-D-S---L-RF--KVEE-E-EP-E---E--C------HI--Y--------------R-----P-------------L---Q-Q-L----IDR----G-------------C---L-------------IC----V-RCH-H--D----IPRK--H-----------TG------K--LG-----Q-I-CT-G--MSV---L-SG-A-K----L-ERLIRL-TSFN-LF------H-IHQ-RVVC--D---E-----------------NP-P----R----P-L--PKC------P---Y---S------------I----C- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------------W----------------------------------------------------------------------TW-S--------L--P------------------------T-S--------P-----------T-----S-TG---W------R--------------------------------------------------------------------N-------------H-------------------------------------------------------------------W------------N-------------H-----------------LY--T------V----------------------------------R------------------P--------------------------------H- SAPs(SNPs) (2)
             SAPs(SNPs) (3) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N--------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (3)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2wcg B   0 FARPCIPKSFGYSSVVCVCNATYCDSFDPP---ALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHRQ 497
                                     9        19        29   |    39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489        
                                                        29  33                                                                                                                                                                                                                                                                                                                                                                                                                                                                                

Chain B from PDB  Type:PROTEIN  Length:495
 aligned with GLCM_HUMAN | P04062 from UniProtKB/Swiss-Prot  Length:536

    Alignment length:498
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528        
           GLCM_HUMAN    39 GARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWRRQ 536
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains -----2wcgB01 B:5-28,B:78-431 ------2wcgB02 B:35-77,B:432-497                  2wcgB01 B:5-28,B:78-431 Glycosidases                                                                                                                                                                                                                                                                                                                              2wcgB02 B:35-77,B:432-497 Golgi alpha-mannosidase II               CATH domains
           Pfam domains (1) -Glyco_hydro_30-2wcgB01 B:1-49   4                                                                                                                                                                                                                                                                                                                                                                                                                                                                             --- Pfam domains (1)
           Pfam domains (2) -Glyco_hydro_30-2wcgB02 B:1-49   4                                                                                                                                                                                                                                                                                                                                                                                                                                                                             --- Pfam domains (2)
         Sec.struct. author ......ee.......eeee...........---...eeeeeee.......eeeeee..........eeeeeeeeeeee..eeeee.hhhhhhhhh..hhhhhhhhhhhhhh.......eeeeee..........................hhhhhhhhhhhhhhhhhhh....eeeeee...hhhh.................hhhhhhhhhhhhhhhhhhhh......eee.....hhhhh..........hhhhhhhhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhhhhhhh...eeeeee...............hhhhhhhhhhhhhhhhhh.eeeeeeee...................eeeehhhheeeehhhhhhhhhhhh......eeeeeee.....eeeeeee.....eeeeeee.....eeeeeee...eeeeeee....eeeeee... Sec.struct. author
             SAPs(SNPs) (1) -------E-------LS-------N------------V---K-I--E-Q----T-------------------------N----------T----------------L-----E---D-SQ-LV---V---C--I-E---H----------------Q-L-NP-------C---F-D-S---L-RF--KVEE-E-EP-E---E--C------HI--Y--------------R-----P-------------L---Q-Q-L----IDR----G-------------C---L-------------IC----V-RCH-H--D----IPRK--H-----------TG------K--LG-----Q-I-CT-G--MSV---L-SG-A-K----L-ERLIRL-TSFN-LF------H-IHQ-RVVC--D---E-----------------NP-P----R----P-L--PKC------P---Y---S------------I----C- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------------W----------------------------------------------------------------------TW-S--------L--P------------------------T-S--------P-----------T-----S-TG---W------R--------------------------------------------------------------------N-------------H-------------------------------------------------------------------W------------N-------------H-----------------LY--T------V----------------------------------R------------------P--------------------------------H- SAPs(SNPs) (2)
             SAPs(SNPs) (3) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N--------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (3)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
           Transcript 1 (1) 1---------------------------------------------------------------Exon 1.7b  PDB: B:64-113 UniProt: 103-152         -----------------------------------------------------------------------------------------------------Exon 1.10  PDB: B:215-294 UniProt: 254-333                                      Exon 1.11b  PDB: B:295-369 UniProt: 334-408                                Exon 1.12a  PDB: B:370-424 UniProt: 409-463            --------------------------------------Exon 1.13d  PDB: B:463-497          Transcript 1 (1)
           Transcript 1 (2) Exon 1.6c  PDB: B:0-64 (gaps) UniProt: 39-103                    ------------------------------------------------Exon 1.8e  PDB: B:113-157 UniProt: 152-196   Exon 1.9b  PDB: B:158-215 UniProt: 197-254                ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.12d  PDB: B:424-463              ---------------------------------- Transcript 1 (2)
                 2wcg B   0 FARPCIPKSFGYSSVVCVCNATYCDSFDPP---ALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHRQ 497
                                     9        19        29   |    39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489        
                                                        29  33                                                                                                                                                                                                                                                                                                                                                                                                                                                                                

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2WCG)

(-) CATH Domains  (2, 4)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (1, 2)

Asymmetric Unit

(-) Gene Ontology  (36, 44)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (B2R6A7_HUMAN | B2R6A7)
molecular function
    GO:0004348    glucosylceramidase activity    Catalysis of the reaction: D-glucosyl-N-acylsphingosine + H2O = D-glucose + N-acylsphingosine.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016798    hydrolase activity, acting on glycosyl bonds    Catalysis of the hydrolysis of any glycosyl bond.
biological process
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0006629    lipid metabolic process    The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0006665    sphingolipid metabolic process    The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).
cellular component
    GO:0005765    lysosomal membrane    The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.

Chain A,B   (GLCM_HUMAN | P04062)
molecular function
    GO:0004348    glucosylceramidase activity    Catalysis of the reaction: D-glucosyl-N-acylsphingosine + H2O = D-glucose + N-acylsphingosine.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016798    hydrolase activity, acting on glycosyl bonds    Catalysis of the hydrolysis of any glycosyl bond.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0005102    receptor binding    Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
biological process
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0009267    cellular response to starvation    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nourishment.
    GO:0071356    cellular response to tumor necrosis factor    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus.
    GO:0046513    ceramide biosynthetic process    The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid.
    GO:0006680    glucosylceramide catabolic process    The chemical reactions and pathways resulting in the breakdown of glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group.
    GO:0006687    glycosphingolipid metabolic process    The chemical reactions and pathways involving glycosphingolipids, any compound with residues of sphingoid and at least one monosaccharide.
    GO:0006629    lipid metabolic process    The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0043407    negative regulation of MAP kinase activity    Any process that stops, prevents, or reduces the frequency, rate or extent of MAP kinase activity.
    GO:0050728    negative regulation of inflammatory response    Any process that stops, prevents, or reduces the frequency, rate or extent of the inflammatory response.
    GO:0032715    negative regulation of interleukin-6 production    Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-6 production.
    GO:0016239    positive regulation of macroautophagy    Any process, such as recognition of nutrient depletion, that activates or increases the rate of macroautophagy to bring cytosolic macromolecules to the vacuole/lysosome for degradation.
    GO:0035307    positive regulation of protein dephosphorylation    Any process that activates or increases the frequency, rate or extent of removal of phosphate groups from a protein.
    GO:1903052    positive regulation of proteolysis involved in cellular protein catabolic process    Any process that activates or increases the frequency, rate or extent of proteolysis involved in cellular protein catabolic process.
    GO:0016241    regulation of macroautophagy    Any process that modulates the frequency, rate or extent of macroautophagy.
    GO:0032434    regulation of proteasomal ubiquitin-dependent protein catabolic process    Any process that modulates the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
    GO:0033561    regulation of water loss via skin    A process that modulates the rate or extent of water loss from an organism via the skin.
    GO:0043627    response to estrogen    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics.
    GO:0051384    response to glucocorticoid    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects.
    GO:0009268    response to pH    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus. pH is a measure of the acidity or basicity of an aqueous solution.
    GO:0033574    response to testosterone    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a testosterone stimulus.
    GO:0097066    response to thyroid hormone    A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroid hormone stimulus.
    GO:0043589    skin morphogenesis    The process in which the anatomical structures of the skin are generated and organized. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner, sensitive and vascular dermis (cutis, corium or true skin) composed mostly of connective tissue.
    GO:0006665    sphingolipid metabolic process    The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).
    GO:0046512    sphingosine biosynthetic process    The chemical reactions and pathways resulting in the formation of sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues.
    GO:0023021    termination of signal transduction    The signaling process in which signal transduction is brought to an end rather than being reversibly modulated.
cellular component
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0043202    lysosomal lumen    The volume enclosed within the lysosomal membrane.
    GO:0005765    lysosomal membrane    The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.
    GO:0005764    lysosome    A small lytic vacuole that has cell cycle-independent morphology and is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        GLCM_HUMAN | P040621ogs 1y7v 2f61 2j25 2nsx 2nt0 2nt1 2v3d 2v3e 2v3f 2vt0 2wkl 2xwd 2xwe 3gxd 3gxf 3gxi 3gxm 3ke0 3keh 3rik 3ril

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2WCG)