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Getting 'Hetero Component' information from database.
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Getting 'Site' information from database.
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2WCG
Biol. Unit 1
Info
Asym.Unit (182 KB)
Biol.Unit 1 (90 KB)
Biol.Unit 2 (90 KB)
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(1)
Title
:
X-RAY STRUCTURE OF ACID-BETA-GLUCOSIDASE WITH N-OCTYL( CYCLIC GUANIDINE)-NOJIRIMYCIN IN THE ACTIVE SITE
Authors
:
B. Brumshtein, M. Aguilar, M. I. Garcia-Moreno, C. O. Mellet, J. M. Garcia-Fernandez, I. Silman, Y. Shaaltiel, D. Aviezer, J. L. Sussman, A. H. Futerman
Date
:
12 Mar 09 (Deposition) - 24 Nov 09 (Release) - 24 Nov 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Lipid Metabolism, Glucocerebrosidase, Membrane, Lysosome, Hydrolase, Glucosidase, Glycoprotein, Gaucher Disease, Sphingolipid Metabolism
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. Brumshtein, M. Aguilar-Moncayo, M. I. Garcia-Moreno, C. Ortiz Mellet, J. M. Garcia Fernandez, I. Silman, Y. Shaaltiel, D. Aviezer, J. L. Sussman, A. H. Futerman
6-Amino-6-Deoxy-5, 6-Di-N-(N'- Octyliminomethylidene)Nojirimycin: Synthesis, Biological Evaluation, And Crystal Structure In Complex With Acid Beta-Glucosidase.
Chembiochem V. 10 1480 2009
[
close entry info
]
Hetero Components
(5, 11)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
2a: 2,6-ANHYDRO-1-DEOXY-D-GALACTITOL (FU4a)
2b: 2,6-ANHYDRO-1-DEOXY-D-GALACTITOL (FU4b)
3a: ALPHA-D-MANNOSE (MANa)
3b: ALPHA-D-MANNOSE (MANb)
4a: (3E,5R,6R,7S,8R,8AR)-3-(OCTYLIMINO... (MT5a)
4b: (3E,5R,6R,7S,8R,8AR)-3-(OCTYLIMINO... (MT5b)
5a: N-ACETYL-D-GLUCOSAMINE (NAGa)
5b: N-ACETYL-D-GLUCOSAMINE (NAGb)
5c: N-ACETYL-D-GLUCOSAMINE (NAGc)
5d: N-ACETYL-D-GLUCOSAMINE (NAGd)
6a: SULFATE ION (SO4a)
6b: SULFATE ION (SO4b)
6c: SULFATE ION (SO4c)
6d: SULFATE ION (SO4d)
6e: SULFATE ION (SO4e)
6f: SULFATE ION (SO4f)
6g: SULFATE ION (SO4g)
6h: SULFATE ION (SO4h)
6i: SULFATE ION (SO4i)
6j: SULFATE ION (SO4j)
6k: SULFATE ION (SO4k)
6l: SULFATE ION (SO4l)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
FU4
1
Ligand/Ion
2,6-ANHYDRO-1-DEOXY-D-GALACTITOL
3
MAN
1
Ligand/Ion
ALPHA-D-MANNOSE
4
MT5
1
Ligand/Ion
(3E,5R,6R,7S,8R,8AR)-3-(OCTYLIMINO)OCTAHYDROIMIDAZO[1,5-A]PYRIDINE-5,6,7,8-TETROL
5
NAG
2
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
6
SO4
6
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC3 (SOFTWARE)
03: AC5 (SOFTWARE)
04: AC7 (SOFTWARE)
05: AC8 (SOFTWARE)
06: BC3 (SOFTWARE)
07: BC5 (SOFTWARE)
08: BC7 (SOFTWARE)
09: BC8 (SOFTWARE)
10: CC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
NAG A:1499 , NAG A:1500 , HOH A:2362
BINDING SITE FOR RESIDUE FU4 A1502
02
AC3
SOFTWARE
TYR A:11 , SER A:12 , ARG A:353 , SER A:356 , ASP A:358
BINDING SITE FOR RESIDUE SO4 A1503
03
AC5
SOFTWARE
LYS A:79 , TRP A:228 , ARG A:277 , HIS A:306 , HOH A:2313 , HOH A:2364
BINDING SITE FOR RESIDUE SO4 A1504
04
AC7
SOFTWARE
GLY A:193 , LYS A:194 , SER A:242 , GLY A:243 , HOH A:2365 , HOH A:2366
BINDING SITE FOR RESIDUE SO4 A1505
05
AC8
SOFTWARE
ARG A:44 , SER A:45 , HOH A:2047
BINDING SITE FOR RESIDUE SO4 A1506
06
BC3
SOFTWARE
GLU A:254 , ARG A:257
BINDING SITE FOR RESIDUE SO4 A1507
07
BC5
SOFTWARE
ARG A:44 , TYR A:487
BINDING SITE FOR RESIDUE SO4 A1508
08
BC7
SOFTWARE
ASP A:127 , PHE A:128 , TRP A:179 , ASN A:234 , GLU A:235 , PHE A:246 , TYR A:313 , GLU A:340 , SER A:345 , TRP A:381 , HOH A:2300 , HOH A:2369
BINDING SITE FOR RESIDUE MT5 A1509
09
BC8
SOFTWARE
ARG A:353
BINDING SITE FOR RESIDUE CL A1510
10
CC1
SOFTWARE
ASN A:19 , THR A:21 , FU4 A:1502 , HOH A:2359 , HOH A:2360 , HOH A:2361
BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 19 RESIDUES 1499 TO 1501
[
close Site info
]
SAPs(SNPs)/Variants
(156, 156)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
001: VAR_063066 (K7E, chain A, )
002: VAR_003255 (V15L, chain A, )
003: VAR_032394 (C16S, chain A, )
004: VAR_032395 (D24N, chain A, )
005: VAR_003256 (F37V, chain A, )
006: VAR_009033 (E41K, chain A, )
007: VAR_003257 (T43I, chain A, )
008: VAR_003258 (G46E, chain A, )
009: VAR_032197 (R48Q, chain A, )
010: VAR_003259 (R48W, chain A, )
011: VAR_032396 (M53T, chain A, )
012: VAR_003260 (K79N, chain A, )
013: VAR_032397 (A90T, chain A, )
014: VAR_009034 (S107L, chain A, )
015: VAR_003261 (G113E, chain A, )
016: VAR_032398 (N117D, chain A, )
017: VAR_032399 (I119S, chain A, )
018: VAR_003262 (I119T, chain A, )
019: VAR_003263 (R120Q, chain A, )
020: VAR_003264 (R120W, chain A, )
021: VAR_032198 (P122L, chain A, )
022: VAR_003265 (P122S, chain A, )
023: VAR_032199 (M123V, chain A, )
024: VAR_032200 (D127V, chain A, )
025: VAR_009035 (R131C, chain A, )
026: VAR_009036 (R131L, chain A, )
027: VAR_032400 (T134I, chain A, )
028: VAR_003266 (T134P, chain A, )
029: VAR_032401 (A136E, chain A, )
030: VAR_003267 (D140H, chain A, )
031: VAR_003268 (K157Q, chain A, )
032: VAR_009037 (P159L, chain A, )
033: VAR_032402 (P159T, chain A, )
034: VAR_032201 (I161N, chain A, )
035: VAR_010059 (I161S, chain A, )
036: VAR_032403 (H162P, chain A, )
037: VAR_032404 (R170C, chain A, )
038: VAR_003269 (R170P, chain A, )
039: VAR_032202 (L174F, chain A, )
040: VAR_003270 (A176D, chain A, )
041: VAR_003271 (P178S, chain A, )
042: VAR_032405 (P182L, chain A, )
043: VAR_003272 (P182T, chain A, )
044: VAR_003273 (W184R, chain A, )
045: VAR_032203 (L185F, chain A, )
046: VAR_003275 (N188K, chain A, )
047: VAR_003274 (N188S, chain A, )
048: VAR_010060 (G189V, chain A, )
049: VAR_009038 (A190E, chain A, )
050: VAR_032406 (A190T, chain A, )
051: VAR_032407 (V191E, chain A, )
052: VAR_003276 (V191G, chain A, )
053: VAR_032204 (G193E, chain A, )
054: VAR_003277 (G195E, chain A, )
055: VAR_009039 (G195W, chain A, )
056: VAR_003278 (S196P, chain A, )
057: VAR_032205 (K198E, chain A, )
058: VAR_010061 (G202E, chain A, )
059: VAR_003279 (G202R, chain A, )
060: VAR_010062 (Y205C, chain A, )
061: VAR_003280 (Y212H, chain A, )
062: VAR_003281 (F213I, chain A, )
063: VAR_003282 (F216Y, chain A, )
064: VAR_032408 (T231R, chain A, )
065: VAR_003283 (S237P, chain A, )
066: VAR_032409 (F251L, chain A, )
067: VAR_009040 (H255Q, chain A, )
068: VAR_003284 (R257Q, chain A, )
069: VAR_009041 (F259L, chain A, )
070: VAR_032206 (L264I, chain A, )
071: VAR_010063 (G265D, chain A, )
072: VAR_003285 (P266R, chain A, )
073: VAR_032410 (S271G, chain A, )
074: VAR_010064 (S271N, chain A, )
075: VAR_003286 (R285C, chain A, )
076: VAR_009042 (R285H, chain A, )
077: VAR_003287 (P289L, chain A, )
078: VAR_003288 (K303I, chain A, )
079: VAR_009043 (Y304C, chain A, )
080: VAR_003289 (A309V, chain A, )
081: VAR_009044 (H311R, chain A, )
082: VAR_003290 (W312C, chain A, )
083: VAR_003291 (Y313H, chain A, )
084: VAR_003292 (D315H, chain A, )
085: VAR_003293 (A318D, chain A, )
086: VAR_003294 (T323I, chain A, )
087: VAR_003295 (L324P, chain A, )
088: VAR_003296 (G325R, chain A, )
089: VAR_003297 (E326K, chain A, )
090: VAR_032411 (R329H, chain A, )
091: VAR_009045 (A341T, chain A, )
092: VAR_003298 (C342G, chain A, )
093: VAR_032207 (E349K, chain A, )
094: VAR_010065 (V352L, chain A, )
095: VAR_010066 (R353G, chain A, )
096: VAR_032208 (R353W, chain A, )
097: VAR_003299 (R359Q, chain A, )
098: VAR_032412 (M361I, chain A, )
099: VAR_032209 (Y363C, chain A, )
100: VAR_003300 (S364T, chain A, )
101: VAR_010067 (S366G, chain A, )
102: VAR_009046 (S366N, chain A, )
103: VAR_003301 (T369M, chain A, )
104: VAR_003302 (N370S, chain A, )
105: VAR_032210 (L371V, chain A, )
106: VAR_010068 (V375L, chain A, )
107: VAR_003303 (G377S, chain A, )
108: VAR_003304 (W378G, chain A, )
109: VAR_003305 (D380A, chain A, )
110: VAR_032211 (D380H, chain A, )
111: VAR_003306 (D380N, chain A, )
112: VAR_032212 (N382K, chain A, )
113: VAR_010069 (P387L, chain A, )
114: VAR_003307 (G389E, chain A, )
115: VAR_032213 (G390R, chain A, )
116: VAR_003308 (P391L, chain A, )
117: VAR_003309 (N392I, chain A, )
118: VAR_009047 (W393R, chain A, )
119: VAR_003310 (V394L, chain A, )
120: VAR_003311 (N396T, chain A, )
121: VAR_032214 (F397S, chain A, )
122: VAR_009048 (V398F, chain A, )
123: VAR_010070 (V398L, chain A, )
124: VAR_003312 (D399N, chain A, )
125: VAR_032413 (D399Y, chain A, )
126: VAR_010071 (P401L, chain A, )
127: VAR_032414 (I402F, chain A, )
128: VAR_010072 (I402T, chain A, )
129: VAR_003313 (D409H, chain A, )
130: VAR_003314 (D409V, chain A, )
131: VAR_010073 (F411I, chain A, )
132: VAR_003315 (Y412H, chain A, )
133: VAR_010074 (K413Q, chain A, )
134: VAR_003316 (P415R, chain A, )
135: VAR_032215 (M416V, chain A, )
136: VAR_003317 (F417V, chain A, )
137: VAR_003318 (Y418C, chain A, )
138: VAR_032415 (G421D, chain A, )
139: VAR_003319 (K425E, chain A, )
140: VAR_063067 (D443N, chain A, )
141: VAR_003321 (L444P, chain A, )
142: VAR_003320 (L444R, chain A, )
143: VAR_003322 (A446P, chain A, )
144: VAR_032416 (H451R, chain A, )
145: VAR_003323 (A456P, chain A, )
146: VAR_063068 (V458L, chain A, )
147: VAR_032216 (L461P, chain A, )
148: VAR_009049 (N462K, chain A, )
149: VAR_003324 (R463C, chain A, )
150: VAR_032217 (R463P, chain A, )
151: VAR_003325 (L470P, chain A, )
152: VAR_009050 (D474Y, chain A, )
153: VAR_003326 (G478S, chain A, )
154: VAR_010075 (T491I, chain A, )
155: VAR_003327 (R496C, chain A, )
156: VAR_003328 (R496H, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
001
UniProt
VAR_063066
K
46
E
GLCM_HUMAN
Unclassified
---
A
K
7
E
002
UniProt
VAR_003255
V
54
L
GLCM_HUMAN
Disease (GD)
---
A
V
15
L
003
UniProt
VAR_032394
C
55
S
GLCM_HUMAN
Disease (GD)
---
A
C
16
S
004
UniProt
VAR_032395
D
63
N
GLCM_HUMAN
Disease (GD1)
---
A
D
24
N
005
UniProt
VAR_003256
F
76
V
GLCM_HUMAN
Disease (GD)
---
A
F
37
V
006
UniProt
VAR_009033
E
80
K
GLCM_HUMAN
Disease (GD2)
1141808
A
E
41
K
007
UniProt
VAR_003257
T
82
I
GLCM_HUMAN
Disease (GD)
---
A
T
43
I
008
UniProt
VAR_003258
G
85
E
GLCM_HUMAN
Disease (GD)
---
A
G
46
E
009
UniProt
VAR_032197
R
87
Q
GLCM_HUMAN
Disease (GD)
---
A
R
48
Q
010
UniProt
VAR_003259
R
87
W
GLCM_HUMAN
Disease (GD)
1141814
A
R
48
W
011
UniProt
VAR_032396
M
92
T
GLCM_HUMAN
Polymorphism
3205619
A
M
53
T
012
UniProt
VAR_003260
K
118
N
GLCM_HUMAN
Disease (GD)
---
A
K
79
N
013
UniProt
VAR_032397
A
129
T
GLCM_HUMAN
Disease (GD)
---
A
A
90
T
014
UniProt
VAR_009034
S
146
L
GLCM_HUMAN
Disease (GD)
---
A
S
107
L
015
UniProt
VAR_003261
G
152
E
GLCM_HUMAN
Disease (GD)
---
A
G
113
E
016
UniProt
VAR_032398
N
156
D
GLCM_HUMAN
Disease (GD)
---
A
N
117
D
017
UniProt
VAR_032399
I
158
S
GLCM_HUMAN
Disease (GD1)
---
A
I
119
S
018
UniProt
VAR_003262
I
158
T
GLCM_HUMAN
Disease (GD)
---
A
I
119
T
019
UniProt
VAR_003263
R
159
Q
GLCM_HUMAN
Disease (GD)
---
A
R
120
Q
020
UniProt
VAR_003264
R
159
W
GLCM_HUMAN
Disease (GD)
---
A
R
120
W
021
UniProt
VAR_032198
P
161
L
GLCM_HUMAN
Disease (GD)
---
A
P
122
L
022
UniProt
VAR_003265
P
161
S
GLCM_HUMAN
Disease (GD)
---
A
P
122
S
023
UniProt
VAR_032199
M
162
V
GLCM_HUMAN
Disease (GD)
---
A
M
123
V
024
UniProt
VAR_032200
D
166
V
GLCM_HUMAN
Disease (GD)
---
A
D
127
V
025
UniProt
VAR_009035
R
170
C
GLCM_HUMAN
Disease (GD2)
---
A
R
131
C
026
UniProt
VAR_009036
R
170
L
GLCM_HUMAN
Disease (GD)
---
A
R
131
L
027
UniProt
VAR_032400
T
173
I
GLCM_HUMAN
Disease (GD)
---
A
T
134
I
028
UniProt
VAR_003266
T
173
P
GLCM_HUMAN
Disease (GD)
---
A
T
134
P
029
UniProt
VAR_032401
A
175
E
GLCM_HUMAN
Disease (GD)
---
A
A
136
E
030
UniProt
VAR_003267
D
179
H
GLCM_HUMAN
Disease (GD)
---
A
D
140
H
031
UniProt
VAR_003268
K
196
Q
GLCM_HUMAN
Disease (GD)
---
A
K
157
Q
032
UniProt
VAR_009037
P
198
L
GLCM_HUMAN
Disease (GD)
---
A
P
159
L
033
UniProt
VAR_032402
P
198
T
GLCM_HUMAN
Disease (GD)
---
A
P
159
T
034
UniProt
VAR_032201
I
200
N
GLCM_HUMAN
Disease (GD)
---
A
I
161
N
035
UniProt
VAR_010059
I
200
S
GLCM_HUMAN
Disease (GD)
---
A
I
161
S
036
UniProt
VAR_032403
H
201
P
GLCM_HUMAN
Disease (GD)
---
A
H
162
P
037
UniProt
VAR_032404
R
209
C
GLCM_HUMAN
Disease (GD)
---
A
R
170
C
038
UniProt
VAR_003269
R
209
P
GLCM_HUMAN
Disease (GD)
---
A
R
170
P
039
UniProt
VAR_032202
L
213
F
GLCM_HUMAN
Disease (GD)
---
A
L
174
F
040
UniProt
VAR_003270
A
215
D
GLCM_HUMAN
Disease (GD)
---
A
A
176
D
041
UniProt
VAR_003271
P
217
S
GLCM_HUMAN
Disease (GD)
---
A
P
178
S
042
UniProt
VAR_032405
P
221
L
GLCM_HUMAN
Disease (GD1)
---
A
P
182
L
043
UniProt
VAR_003272
P
221
T
GLCM_HUMAN
Disease (GD)
---
A
P
182
T
044
UniProt
VAR_003273
W
223
R
GLCM_HUMAN
Disease (GD)
---
A
W
184
R
045
UniProt
VAR_032203
L
224
F
GLCM_HUMAN
Disease (GD)
---
A
L
185
F
046
UniProt
VAR_003275
N
227
K
GLCM_HUMAN
Disease (GD)
381418
A
N
188
K
047
UniProt
VAR_003274
N
227
S
GLCM_HUMAN
Disease (GD)
364897
A
N
188
S
048
UniProt
VAR_010060
G
228
V
GLCM_HUMAN
Disease (GD)
---
A
G
189
V
049
UniProt
VAR_009038
A
229
E
GLCM_HUMAN
Disease (GD)
---
A
A
190
E
050
UniProt
VAR_032406
A
229
T
GLCM_HUMAN
Disease (GD)
---
A
A
190
T
051
UniProt
VAR_032407
V
230
E
GLCM_HUMAN
Disease (GD1)
---
A
V
191
E
052
UniProt
VAR_003276
V
230
G
GLCM_HUMAN
Disease (GD1)
381427
A
V
191
G
053
UniProt
VAR_032204
G
232
E
GLCM_HUMAN
Disease (GD)
---
A
G
193
E
054
UniProt
VAR_003277
G
234
E
GLCM_HUMAN
Disease (GD)
---
A
G
195
E
055
UniProt
VAR_009039
G
234
W
GLCM_HUMAN
Disease (GD)
---
A
G
195
W
056
UniProt
VAR_003278
S
235
P
GLCM_HUMAN
Disease (GD)
1064644
A
S
196
P
057
UniProt
VAR_032205
K
237
E
GLCM_HUMAN
Disease (GD)
---
A
K
198
E
058
UniProt
VAR_010061
G
241
E
GLCM_HUMAN
Disease (GD)
---
A
G
202
E
059
UniProt
VAR_003279
G
241
R
GLCM_HUMAN
Disease (GD)
---
A
G
202
R
060
UniProt
VAR_010062
Y
244
C
GLCM_HUMAN
Disease (GD)
---
A
Y
205
C
061
UniProt
VAR_003280
Y
251
H
GLCM_HUMAN
Disease (GD)
---
A
Y
212
H
062
UniProt
VAR_003281
F
252
I
GLCM_HUMAN
Disease (GD)
381737
A
F
213
I
063
UniProt
VAR_003282
F
255
Y
GLCM_HUMAN
Disease (GD)
---
A
F
216
Y
064
UniProt
VAR_032408
T
270
R
GLCM_HUMAN
Disease (GD)
---
A
T
231
R
065
UniProt
VAR_003283
S
276
P
GLCM_HUMAN
Disease (GD)
---
A
S
237
P
066
UniProt
VAR_032409
F
290
L
GLCM_HUMAN
Disease (GD)
---
A
F
251
L
067
UniProt
VAR_009040
H
294
Q
GLCM_HUMAN
Disease (GD1)
---
A
H
255
Q
068
UniProt
VAR_003284
R
296
Q
GLCM_HUMAN
Disease (GD)
---
A
R
257
Q
069
UniProt
VAR_009041
F
298
L
GLCM_HUMAN
Disease (GD)
---
A
F
259
L
070
UniProt
VAR_032206
L
303
I
GLCM_HUMAN
Disease (GD)
---
A
L
264
I
071
UniProt
VAR_010063
G
304
D
GLCM_HUMAN
Disease (GD)
---
A
G
265
D
072
UniProt
VAR_003285
P
305
R
GLCM_HUMAN
Disease (GD)
---
A
P
266
R
073
UniProt
VAR_032410
S
310
G
GLCM_HUMAN
Polymorphism
1057942
A
S
271
G
074
UniProt
VAR_010064
S
310
N
GLCM_HUMAN
Disease (GD)
---
A
S
271
N
075
UniProt
VAR_003286
R
324
C
GLCM_HUMAN
Disease (GD)
---
A
R
285
C
076
UniProt
VAR_009042
R
324
H
GLCM_HUMAN
Disease (GD)
---
A
R
285
H
077
UniProt
VAR_003287
P
328
L
GLCM_HUMAN
Disease (GD)
---
A
P
289
L
078
UniProt
VAR_003288
K
342
I
GLCM_HUMAN
Disease (GD)
---
A
K
303
I
079
UniProt
VAR_009043
Y
343
C
GLCM_HUMAN
Disease (GD)
---
A
Y
304
C
080
UniProt
VAR_003289
A
348
V
GLCM_HUMAN
Disease (GD)
---
A
A
309
V
081
UniProt
VAR_009044
H
350
R
GLCM_HUMAN
Unclassified
---
A
H
311
R
082
UniProt
VAR_003290
W
351
C
GLCM_HUMAN
Disease (GD)
---
A
W
312
C
083
UniProt
VAR_003291
Y
352
H
GLCM_HUMAN
Disease (GD)
---
A
Y
313
H
084
UniProt
VAR_003292
D
354
H
GLCM_HUMAN
Disease (GD)
---
A
D
315
H
085
UniProt
VAR_003293
A
357
D
GLCM_HUMAN
Disease (GD)
---
A
A
318
D
086
UniProt
VAR_003294
T
362
I
GLCM_HUMAN
Disease (GD)
---
A
T
323
I
087
UniProt
VAR_003295
L
363
P
GLCM_HUMAN
Disease (GD)
---
A
L
324
P
088
UniProt
VAR_003296
G
364
R
GLCM_HUMAN
Disease (GD)
---
A
G
325
R
089
UniProt
VAR_003297
E
365
K
GLCM_HUMAN
Disease (GD)
2230288
A
E
326
K
090
UniProt
VAR_032411
R
368
H
GLCM_HUMAN
Polymorphism
1064648
A
R
329
H
091
UniProt
VAR_009045
A
380
T
GLCM_HUMAN
Disease (GD)
---
A
A
341
T
092
UniProt
VAR_003298
C
381
G
GLCM_HUMAN
Disease (GD)
---
A
C
342
G
093
UniProt
VAR_032207
E
388
K
GLCM_HUMAN
Disease (GD)
---
A
E
349
K
094
UniProt
VAR_010065
V
391
L
GLCM_HUMAN
Disease (GD)
---
A
V
352
L
095
UniProt
VAR_010066
R
392
G
GLCM_HUMAN
Disease (GD)
---
A
R
353
G
096
UniProt
VAR_032208
R
392
W
GLCM_HUMAN
Disease (GD)
---
A
R
353
W
097
UniProt
VAR_003299
R
398
Q
GLCM_HUMAN
Disease (GD)
---
A
R
359
Q
098
UniProt
VAR_032412
M
400
I
GLCM_HUMAN
Disease (GD)
149487315
A
M
361
I
099
UniProt
VAR_032209
Y
402
C
GLCM_HUMAN
Disease (GD)
---
A
Y
363
C
100
UniProt
VAR_003300
S
403
T
GLCM_HUMAN
Disease (GD)
---
A
S
364
T
101
UniProt
VAR_010067
S
405
G
GLCM_HUMAN
Disease (GD)
---
A
S
366
G
102
UniProt
VAR_009046
S
405
N
GLCM_HUMAN
Disease (GD)
---
A
S
366
N
103
UniProt
VAR_003301
T
408
M
GLCM_HUMAN
Disease (GD)
2230289
A
T
369
M
104
UniProt
VAR_003302
N
409
S
GLCM_HUMAN
Disease (GD1)
76763715
A
N
370
S
105
UniProt
VAR_032210
L
410
V
GLCM_HUMAN
Disease (GD)
---
A
L
371
V
106
UniProt
VAR_010068
V
414
L
GLCM_HUMAN
Disease (GD)
---
A
V
375
L
107
UniProt
VAR_003303
G
416
S
GLCM_HUMAN
Disease (GD)
---
A
G
377
S
108
UniProt
VAR_003304
W
417
G
GLCM_HUMAN
Disease (GD)
---
A
W
378
G
109
UniProt
VAR_003305
D
419
A
GLCM_HUMAN
Disease (GD)
---
A
D
380
A
110
UniProt
VAR_032211
D
419
H
GLCM_HUMAN
Disease (GD)
---
A
D
380
H
111
UniProt
VAR_003306
D
419
N
GLCM_HUMAN
Disease (GD)
---
A
D
380
N
112
UniProt
VAR_032212
N
421
K
GLCM_HUMAN
Disease (GD)
---
A
N
382
K
113
UniProt
VAR_010069
P
426
L
GLCM_HUMAN
Disease (GD)
---
A
P
387
L
114
UniProt
VAR_003307
G
428
E
GLCM_HUMAN
Disease (GD)
---
A
G
389
E
115
UniProt
VAR_032213
G
429
R
GLCM_HUMAN
Disease (GD)
---
A
G
390
R
116
UniProt
VAR_003308
P
430
L
GLCM_HUMAN
Disease (GD)
---
A
P
391
L
117
UniProt
VAR_003309
N
431
I
GLCM_HUMAN
Disease (GD)
---
A
N
392
I
118
UniProt
VAR_009047
W
432
R
GLCM_HUMAN
Disease (GD)
---
A
W
393
R
119
UniProt
VAR_003310
V
433
L
GLCM_HUMAN
Disease (GD)
---
A
V
394
L
120
UniProt
VAR_003311
N
435
T
GLCM_HUMAN
Disease (GD1)
---
A
N
396
T
121
UniProt
VAR_032214
F
436
S
GLCM_HUMAN
Disease (GD)
---
A
F
397
S
122
UniProt
VAR_009048
V
437
F
GLCM_HUMAN
Unclassified
---
A
V
398
F
123
UniProt
VAR_010070
V
437
L
GLCM_HUMAN
Disease (GD3)
---
A
V
398
L
124
UniProt
VAR_003312
D
438
N
GLCM_HUMAN
Disease (GD)
---
A
D
399
N
125
UniProt
VAR_032413
D
438
Y
GLCM_HUMAN
Disease (GD)
---
A
D
399
Y
126
UniProt
VAR_010071
P
440
L
GLCM_HUMAN
Disease (GD1)
---
A
P
401
L
127
UniProt
VAR_032414
I
441
F
GLCM_HUMAN
Disease (GD)
---
A
I
402
F
128
UniProt
VAR_010072
I
441
T
GLCM_HUMAN
Disease (GD)
---
A
I
402
T
129
UniProt
VAR_003313
D
448
H
GLCM_HUMAN
Disease (GD)
1064651
A
D
409
H
130
UniProt
VAR_003314
D
448
V
GLCM_HUMAN
Disease (GD)
---
A
D
409
V
131
UniProt
VAR_010073
F
450
I
GLCM_HUMAN
Disease (GD)
---
A
F
411
I
132
UniProt
VAR_003315
Y
451
H
GLCM_HUMAN
Disease (GD)
---
A
Y
412
H
133
UniProt
VAR_010074
K
452
Q
GLCM_HUMAN
Disease (GD)
---
A
K
413
Q
134
UniProt
VAR_003316
P
454
R
GLCM_HUMAN
Disease (GD)
---
A
P
415
R
135
UniProt
VAR_032215
M
455
V
GLCM_HUMAN
Disease (GD)
---
A
M
416
V
136
UniProt
VAR_003317
F
456
V
GLCM_HUMAN
Disease (GD)
---
A
F
417
V
137
UniProt
VAR_003318
Y
457
C
GLCM_HUMAN
Disease (GD)
---
A
Y
418
C
138
UniProt
VAR_032415
G
460
D
GLCM_HUMAN
Disease (GD1)
---
A
G
421
D
139
UniProt
VAR_003319
K
464
E
GLCM_HUMAN
Disease (GD)
---
A
K
425
E
140
UniProt
VAR_063067
D
482
N
GLCM_HUMAN
Polymorphism
75671029
A
D
443
N
141
UniProt
VAR_003321
L
483
P
GLCM_HUMAN
Disease (GD2)
---
A
L
444
P
142
UniProt
VAR_003320
L
483
R
GLCM_HUMAN
Disease (GD)
---
A
L
444
R
143
UniProt
VAR_003322
A
485
P
GLCM_HUMAN
Disease (GD)
---
A
A
446
P
144
UniProt
VAR_032416
H
490
R
GLCM_HUMAN
Disease (GD)
---
A
H
451
R
145
UniProt
VAR_003323
A
495
P
GLCM_HUMAN
Disease (GD)
368060
A
A
456
P
146
UniProt
VAR_063068
V
497
L
GLCM_HUMAN
Polymorphism
---
A
V
458
L
147
UniProt
VAR_032216
L
500
P
GLCM_HUMAN
Disease (GD)
---
A
L
461
P
148
UniProt
VAR_009049
N
501
K
GLCM_HUMAN
Disease (GD)
---
A
N
462
K
149
UniProt
VAR_003324
R
502
C
GLCM_HUMAN
Disease (GD)
---
A
R
463
C
150
UniProt
VAR_032217
R
502
P
GLCM_HUMAN
Disease (GD)
---
A
R
463
P
151
UniProt
VAR_003325
L
509
P
GLCM_HUMAN
Polymorphism
---
A
L
470
P
152
UniProt
VAR_009050
D
513
Y
GLCM_HUMAN
Disease (GD2)
---
A
D
474
Y
153
UniProt
VAR_003326
G
517
S
GLCM_HUMAN
Disease (GD)
---
A
G
478
S
154
UniProt
VAR_010075
T
530
I
GLCM_HUMAN
Disease (GD3)
---
A
T
491
I
155
UniProt
VAR_003327
R
535
C
GLCM_HUMAN
Disease (GD)
---
A
R
496
C
156
UniProt
VAR_003328
R
535
H
GLCM_HUMAN
Disease (GD)
---
A
R
496
H
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_2wcgA01 (A:5-26,A:78-431)
1b: CATH_2wcgB01 (B:5-28,B:78-431)
2a: CATH_2wcgB02 (B:35-77,B:432-497)
2b: CATH_2wcgA02 (A:35-77,A:432-498)
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Alpha-Beta Barrel
(2994)
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:
TIM Barrel
(2806)
Homologous Superfamily
:
Glycosidases
(843)
Human (Homo sapiens)
(94)
1a
2wcgA01
A:5-26,A:78-431
1b
2wcgB01
B:5-28,B:78-431
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Golgi alpha-mannosidase II
(346)
Human (Homo sapiens)
(76)
2a
2wcgB02
B:35-77,B:432-497
2b
2wcgA02
A:35-77,A:432-498
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Pfam Domains
(1, 2)
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1a: PFAM_Glyco_hydro_30_2wcgB01 (B:1-494)
1b: PFAM_Glyco_hydro_30_2wcgB02 (B:1-494)
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:
Glyco_hydro_tim
(488)
Family
:
Glyco_hydro_30
(12)
Homo sapiens (Human)
(11)
1a
Glyco_hydro_30-2wcgB01
B:1-494
1b
Glyco_hydro_30-2wcgB02
B:1-494
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