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(-) Description

Title :  CRYSTAL STRUCTURE OF PORB FROM CORYNEBACTERIUM GLUTAMICUM ( CRYSTAL FORM I)
 
Authors :  K. Ziegler, R. Benz, G. E. Schulz
Date :  15 Mar 08  (Deposition) - 20 May 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.82
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Biol. Unit 7:  G  (1x)
Biol. Unit 8:  H  (1x)
Biol. Unit 9:  I  (1x)
Keywords :  Transmembrane, Membrane Protein, Porin, Membrane, Transport, Ion Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Ziegler, R. Benz, G. E. Schulz
A Putative Alpha-Helical Porin From Corynebacterium Glutamicum.
J. Mol. Biol. V. 379 482 2008
PubMed-ID: 18462756  |  Reference-DOI: 10.1016/J.JMB.2008.04.017

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN CGL0972
    Atcc: 13032
    Chains: A, B, C, D, E, F, G, H, I
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: RESIDUES 28-126
    Organism Scientific: CORYNEBACTERIUM GLUTAMICUM
    Organism Taxid: 1718
    Synonym: PORB, ANION-SPECIFIC PORIN, ANION-SPECIFIC PORIN PRECURSOR

 Structural Features

(-) Chains, Units

  123456789
Asymmetric Unit : ABCDEFGHI
Biological Unit 1 (1x): A        
Biological Unit 2 (1x):  B       
Biological Unit 3 (1x):   C      
Biological Unit 4 (1x):    D     
Biological Unit 5 (1x):     E    
Biological Unit 6 (1x):      F   
Biological Unit 7 (1x):       G  
Biological Unit 8 (1x):        H 
Biological Unit 9 (1x):         I

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 61)

Asymmetric Unit (5, 61)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2CAC13Ligand/IonCACODYLATE ION
3GVT1Ligand/Ion3,6,9,12,15,18,21,24,27-NONAOXAHEPTATRIACONTAN-1-OL
4MRD3Ligand/Ion(4R)-2-METHYLPENTANE-2,4-DIOL
5ZN42Ligand/IonZINC ION
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
2CAC4Ligand/IonCACODYLATE ION
3GVT-1Ligand/Ion3,6,9,12,15,18,21,24,27-NONAOXAHEPTATRIACONTAN-1-OL
4MRD-1Ligand/Ion(4R)-2-METHYLPENTANE-2,4-DIOL
5ZN-1Ligand/IonZINC ION
Biological Unit 2 (3, 4)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2CAC2Ligand/IonCACODYLATE ION
3GVT-1Ligand/Ion3,6,9,12,15,18,21,24,27-NONAOXAHEPTATRIACONTAN-1-OL
4MRD1Ligand/Ion(4R)-2-METHYLPENTANE-2,4-DIOL
5ZN-1Ligand/IonZINC ION
Biological Unit 3 (1, 4)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
2CAC4Ligand/IonCACODYLATE ION
3GVT-1Ligand/Ion3,6,9,12,15,18,21,24,27-NONAOXAHEPTATRIACONTAN-1-OL
4MRD-1Ligand/Ion(4R)-2-METHYLPENTANE-2,4-DIOL
5ZN-1Ligand/IonZINC ION
Biological Unit 4 (0, 0)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
2CAC-1Ligand/IonCACODYLATE ION
3GVT-1Ligand/Ion3,6,9,12,15,18,21,24,27-NONAOXAHEPTATRIACONTAN-1-OL
4MRD-1Ligand/Ion(4R)-2-METHYLPENTANE-2,4-DIOL
5ZN-1Ligand/IonZINC ION
Biological Unit 5 (2, 2)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2CAC-1Ligand/IonCACODYLATE ION
3GVT1Ligand/Ion3,6,9,12,15,18,21,24,27-NONAOXAHEPTATRIACONTAN-1-OL
4MRD-1Ligand/Ion(4R)-2-METHYLPENTANE-2,4-DIOL
5ZN-1Ligand/IonZINC ION
Biological Unit 6 (0, 0)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
2CAC-1Ligand/IonCACODYLATE ION
3GVT-1Ligand/Ion3,6,9,12,15,18,21,24,27-NONAOXAHEPTATRIACONTAN-1-OL
4MRD-1Ligand/Ion(4R)-2-METHYLPENTANE-2,4-DIOL
5ZN-1Ligand/IonZINC ION
Biological Unit 7 (2, 2)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
2CAC1Ligand/IonCACODYLATE ION
3GVT-1Ligand/Ion3,6,9,12,15,18,21,24,27-NONAOXAHEPTATRIACONTAN-1-OL
4MRD1Ligand/Ion(4R)-2-METHYLPENTANE-2,4-DIOL
5ZN-1Ligand/IonZINC ION
Biological Unit 8 (1, 1)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
2CAC-1Ligand/IonCACODYLATE ION
3GVT-1Ligand/Ion3,6,9,12,15,18,21,24,27-NONAOXAHEPTATRIACONTAN-1-OL
4MRD1Ligand/Ion(4R)-2-METHYLPENTANE-2,4-DIOL
5ZN-1Ligand/IonZINC ION
Biological Unit 9 (1, 2)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
2CAC2Ligand/IonCACODYLATE ION
3GVT-1Ligand/Ion3,6,9,12,15,18,21,24,27-NONAOXAHEPTATRIACONTAN-1-OL
4MRD-1Ligand/Ion(4R)-2-METHYLPENTANE-2,4-DIOL
5ZN-1Ligand/IonZINC ION

(-) Sites  (61, 61)

Asymmetric Unit (61, 61)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:26 , CAC A:1092 , CAC A:1093 , GLU F:26BINDING SITE FOR RESIDUE ZN A1089
02AC2SOFTWAREGLU A:37 , CAC A:1092 , CAC A:1093 , GLU F:37BINDING SITE FOR RESIDUE ZN A1090
03AC3SOFTWAREGLU B:26 , LYS B:30 , CAC B:1092 , CAC B:1093 , GLU E:26 , LYS E:30BINDING SITE FOR RESIDUE ZN B1088
04AC4SOFTWAREGLU B:37 , CAC B:1092 , CAC B:1093 , GLU E:37BINDING SITE FOR RESIDUE ZN B1089
05AC5SOFTWAREGLU C:26 , LYS C:30 , CAC C:1095 , CAC C:1101 , GLU H:26 , LYS H:30BINDING SITE FOR RESIDUE ZN C1091
06AC6SOFTWAREGLU C:37 , CAC C:1095 , CAC C:1101 , GLU H:37BINDING SITE FOR RESIDUE ZN C1092
07AC7SOFTWAREGLU D:26 , LYS D:30 , GLU I:26 , CAC I:1090 , CAC I:1091BINDING SITE FOR RESIDUE ZN D1088
08AC8SOFTWAREGLU D:37 , GLU I:37 , CAC I:1090 , CAC I:1091BINDING SITE FOR RESIDUE ZN D1089
09AC9SOFTWAREGLU G:26 , LYS G:30 , CAC G:1093BINDING SITE FOR RESIDUE ZN G1090
10BC1SOFTWAREGLU G:37 , CAC G:1093BINDING SITE FOR RESIDUE ZN G1091
11BC2SOFTWAREASP A:65 , ASP A:69 , ZN A:1095BINDING SITE FOR RESIDUE ZN A1091
12BC3SOFTWAREASP B:65 , ASP B:69 , ZN B:1095 , HOH B:2050BINDING SITE FOR RESIDUE ZN B1090
13BC4SOFTWAREASP C:65 , ASP C:69 , ZN C:1097 , HOH C:2054BINDING SITE FOR RESIDUE ZN C1093
14BC5SOFTWAREASP E:65 , ASP E:69 , ZN E:1092BINDING SITE FOR RESIDUE ZN E1090
15BC6SOFTWAREASP F:65 , ASP F:69 , ZN F:1091 , HOH F:2030BINDING SITE FOR RESIDUE ZN F1088
16BC7SOFTWAREASP G:65 , ASP G:69 , ZN G:1094 , HOH G:2038BINDING SITE FOR RESIDUE ZN G1092
17BC8SOFTWAREASP I:65 , ASP I:69 , ZN I:1092 , HOH I:2035BINDING SITE FOR RESIDUE ZN I1089
18BC9SOFTWAREASP H:65 , ASP H:69 , ZN H:1091 , HOH H:2058BINDING SITE FOR RESIDUE ZN H1090
19CC1SOFTWAREASP D:65 , ASP D:69 , ZN D:1092 , HOH D:2036BINDING SITE FOR RESIDUE ZN D1090
20CC2SOFTWAREGLU A:36 , ZN A:1094 , CAC A:1096 , CAC A:1097 , ZN A:1099 , HOH A:2047 , GLU H:53BINDING SITE FOR RESIDUE ZN A1098
21CC3SOFTWAREZN C:1096 , CAC C:1098 , CAC C:1099 , HOH C:2055 , GLU E:36BINDING SITE FOR RESIDUE ZN C1100
22CC4SOFTWAREGLU F:36 , ZN F:1090 , HOH F:2042BINDING SITE FOR RESIDUE ZN F1089
23CC5SOFTWAREZN D:1091 , HOH D:2039BINDING SITE FOR RESIDUE ZN D1093
24CC6SOFTWAREZN B:1094 , GLU I:53 , HOH I:2030 , HOH I:2036 , HOH I:2037BINDING SITE FOR RESIDUE ZN I1093
25CC7SOFTWAREGLU B:36 , ZN B:1094 , HOH B:2013BINDING SITE FOR RESIDUE ZN B1091
26CC8SOFTWAREGLU C:53 , ZN C:1096 , CAC C:1098 , CAC C:1099BINDING SITE FOR RESIDUE ZN C1094
27CC9SOFTWAREZN A:1094 , CAC A:1096 , CAC A:1097 , ZN A:1098 , GLU H:53BINDING SITE FOR RESIDUE ZN A1099
28DC1SOFTWAREGLU B:26 , GLU B:37 , GLY B:82 , LEU B:83 , ZN B:1088 , ZN B:1089 , CAC B:1093 , GLU E:26 , LYS E:30 , GLU E:37BINDING SITE FOR RESIDUE CAC B1092
29DC2SOFTWAREGLU B:26 , LYS B:30 , GLU B:37 , ZN B:1088 , ZN B:1089 , CAC B:1092 , GLU E:26 , GLU E:37 , GLY E:82 , LEU E:83 , HOH E:2019BINDING SITE FOR RESIDUE CAC B1093
30DC3SOFTWAREASP H:65 , ASP H:69 , ZN H:1090 , HOH H:2058BINDING SITE FOR RESIDUE ZN H1091
31DC4SOFTWAREGLU C:26 , GLU C:37 , GLY C:82 , LEU C:83 , ZN C:1091 , ZN C:1092 , CAC C:1101 , HOH C:2014 , GLU H:26 , LYS H:30 , GLU H:37 , HOH H:2017BINDING SITE FOR RESIDUE CAC C1095
32DC5SOFTWAREGLU G:26 , LYS G:30 , GLU G:37 , LEU G:83 , ZN G:1090 , ZN G:1091BINDING SITE FOR RESIDUE CAC G1093
33DC6SOFTWAREGLU D:26 , GLU D:37 , GLY D:82 , LEU D:83 , ZN D:1088 , ZN D:1089 , GLU I:26 , LYS I:30 , GLU I:37 , CAC I:1091BINDING SITE FOR RESIDUE CAC I1090
34DC7SOFTWAREGLU D:26 , LYS D:30 , GLU D:37 , ZN D:1088 , ZN D:1089 , GLU I:26 , GLU I:37 , GLY I:82 , LEU I:83 , CAC I:1090BINDING SITE FOR RESIDUE CAC I1091
35DC8SOFTWAREGLU A:26 , LYS A:30 , GLU A:37 , ZN A:1089 , ZN A:1090 , CAC A:1093 , GLU F:26 , GLY F:82 , LEU F:83BINDING SITE FOR RESIDUE CAC A1092
36DC9SOFTWAREGLU A:26 , GLY A:82 , ZN A:1089 , ZN A:1090 , CAC A:1092 , GLU F:26 , LYS F:30 , GLU F:37BINDING SITE FOR RESIDUE CAC A1093
37EC1SOFTWARETRP A:19 , GLY A:23 , TRP B:19 , GLY B:23 , ILE B:24 , TRP C:19 , VAL C:20 , GLY C:23 , ILE C:24 , TRP E:19 , VAL E:20 , GLY E:23 , ILE E:24 , GLY F:23 , ILE F:24 , TRP H:19 , VAL H:20 , GLY H:23 , ILE H:24BINDING SITE FOR RESIDUE GVT E1091
38EC2SOFTWAREGLU A:36 , CAC A:1096 , CAC A:1097 , ZN A:1098 , ZN A:1099 , HOH A:2044BINDING SITE FOR RESIDUE ZN A1094
39EC3SOFTWAREGLU C:53 , ZN C:1094 , CAC C:1098 , CAC C:1099 , ZN C:1100BINDING SITE FOR RESIDUE ZN C1096
40EC4SOFTWAREGLU B:53 , GLU F:36 , ZN F:1089 , ZN F:1092 , HOH F:2042BINDING SITE FOR RESIDUE ZN F1090
41EC5SOFTWAREGLU B:46 , GLU B:53 , ZN F:1090 , HOH F:2044BINDING SITE FOR RESIDUE ZN F1092
42EC6SOFTWAREGLU C:36 , GLU D:53 , ZN D:1093 , HOH D:2037BINDING SITE FOR RESIDUE ZN D1091
43EC7SOFTWAREGLU B:36 , ZN B:1091 , HOH B:2013 , GLU I:53 , ZN I:1093BINDING SITE FOR RESIDUE ZN B1094
44EC8SOFTWAREASP A:65 , ASP A:69 , ZN A:1091BINDING SITE FOR RESIDUE ZN A1095
45EC9SOFTWAREASP B:65 , ASP B:69 , ZN B:1090BINDING SITE FOR RESIDUE ZN B1095
46FC1SOFTWAREASP C:65 , ASP C:69 , ZN C:1093BINDING SITE FOR RESIDUE ZN C1097
47FC2SOFTWAREASP E:65 , ASP E:69 , ZN E:1090BINDING SITE FOR RESIDUE ZN E1092
48FC3SOFTWAREASP F:65 , ASP F:69 , ZN F:1088 , HOH F:2043BINDING SITE FOR RESIDUE ZN F1091
49FC4SOFTWAREASP G:65 , ASP G:69 , ZN G:1092BINDING SITE FOR RESIDUE ZN G1094
50FC5SOFTWAREASP I:65 , ASP I:69 , ZN I:1089BINDING SITE FOR RESIDUE ZN I1092
51FC6SOFTWARELEU B:25 , LEU B:74 , ASN F:18 , GLN H:59 , PHE H:60BINDING SITE FOR RESIDUE MRD H1092
52FC7SOFTWAREASP D:65 , ASP D:69 , ZN D:1090BINDING SITE FOR RESIDUE ZN D1092
53FC8SOFTWAREGLY A:33 , VAL A:34 , GLU A:36 , GLN A:39 , ALA A:47 , ZN A:1094 , CAC A:1097 , ZN A:1098 , ZN A:1099 , HOH A:2047BINDING SITE FOR RESIDUE CAC A1096
54FC9SOFTWAREGLU A:36 , ZN A:1094 , CAC A:1096 , ZN A:1098 , ZN A:1099 , HOH A:2046 , GLU H:46 , GLU H:53 , GLU H:68BINDING SITE FOR RESIDUE CAC A1097
55GC1SOFTWAREALA C:49 , GLU C:53 , GLU C:68 , ZN C:1094 , ZN C:1096 , CAC C:1099 , ZN C:1100BINDING SITE FOR RESIDUE CAC C1098
56GC2SOFTWAREGLU C:53 , ZN C:1094 , ZN C:1096 , CAC C:1098 , ZN C:1100 , GLY E:33 , VAL E:34 , GLU E:36 , HOH E:2027BINDING SITE FOR RESIDUE CAC C1099
57GC3SOFTWAREGLU C:26 , LYS C:30 , GLU C:37 , ZN C:1091 , ZN C:1092 , CAC C:1095 , GLU H:26 , GLU H:37 , GLY H:82 , LEU H:83 , HOH H:2016BINDING SITE FOR RESIDUE CAC C1101
58GC4SOFTWAREGLN B:59 , LEU H:29 , HOH H:2046BINDING SITE FOR RESIDUE ACT B1096
59GC5SOFTWAREGLN D:59BINDING SITE FOR RESIDUE ACT E1093
60GC6SOFTWAREASN B:18 , TRP B:19 , LEU C:25 , GLN C:59 , PHE C:60 , LEU C:74 , ARG C:77BINDING SITE FOR RESIDUE MRD B1097
61GC7SOFTWAREASN C:18 , TRP C:19 , LEU F:25 , LEU F:74 , GLN G:59 , PHE G:60BINDING SITE FOR RESIDUE MRD G1095

(-) SS Bonds  (9, 9)

Asymmetric Unit
No.Residues
1A:22 -A:81
2B:22 -B:81
3C:22 -C:81
4D:22 -D:81
5E:22 -E:81
6F:22 -F:81
7G:22 -G:81
8H:22 -H:81
9I:22 -I:81

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2VQG)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2VQG)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2VQG)

(-) Exons   (0, 0)

(no "Exon" information available for 2VQG)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:76
 aligned with Q8NRS3_CORGL | Q8NRS3 from UniProtKB/TrEMBL  Length:126

    Alignment length:76
                                    49        59        69        79        89        99       109      
         Q8NRS3_CORGL    40 LSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKADT 115
               SCOP domains ---------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhh........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------- Transcript
                 2vqg A  13 LSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKADT  88
                                    22        32        42        52        62        72        82      


Chain B from PDB  Type:PROTEIN  Length:77
 aligned with Q8NRS3_CORGL | Q8NRS3 from UniProtKB/TrEMBL  Length:126

    Alignment length:77
                                    47        57        67        77        87        97       107       
         Q8NRS3_CORGL    38 KELSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKAD 114
               SCOP domains ----------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhh........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------- Transcript
                 2vqg B  11 KELSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKAD  87
                                    20        30        40        50        60        70        80       


Chain C from PDB  Type:PROTEIN  Length:77
 aligned with Q8NRS3_CORGL | Q8NRS3 from UniProtKB/TrEMBL  Length:126

    Alignment length:77
                                    50        60        70        80        90       100       110       
         Q8NRS3_CORGL    41 SPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKADTYL 117
               SCOP domains ----------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhh........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------- Transcript
                 2vqg C  14 SPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKADTYL  90
                                    23        33        43        53        63        73        83       


Chain D from PDB  Type:PROTEIN  Length:76
 aligned with Q8NRS3_CORGL | Q8NRS3 from UniProtKB/TrEMBL  Length:126

    Alignment length:76
                                    48        58        68        78        88        98       108      
         Q8NRS3_CORGL    39 ELSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKAD 114
               SCOP domains ---------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhh........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------- Transcript
                 2vqg D  12 ELSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKAD  87
                                    21        31        41        51        61        71        81      


Chain E from PDB  Type:PROTEIN  Length:76
 aligned with Q8NRS3_CORGL | Q8NRS3 from UniProtKB/TrEMBL  Length:126

    Alignment length:76
                                    50        60        70        80        90       100       110      
         Q8NRS3_CORGL    41 SPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKADTY 116
               SCOP domains ---------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhh........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------- Transcript
                 2vqg E  14 SPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKADTY  89
                                    23        33        43        53        63        73        83      


Chain F from PDB  Type:PROTEIN  Length:76
 aligned with Q8NRS3_CORGL | Q8NRS3 from UniProtKB/TrEMBL  Length:126

    Alignment length:76
                                    48        58        68        78        88        98       108      
         Q8NRS3_CORGL    39 ELSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKAD 114
               SCOP domains ---------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhh........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------- Transcript
                 2vqg F  12 ELSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKAD  87
                                    21        31        41        51        61        71        81      


Chain G from PDB  Type:PROTEIN  Length:77
 aligned with Q8NRS3_CORGL | Q8NRS3 from UniProtKB/TrEMBL  Length:126

    Alignment length:77
                                    49        59        69        79        89        99       109       
         Q8NRS3_CORGL    40 LSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKADTY 116
               SCOP domains ----------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhh........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------- Transcript
                 2vqg G  13 LSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKADTY  89
                                    22        32        42        52        62        72        82       


Chain H from PDB  Type:PROTEIN  Length:77
 aligned with Q8NRS3_CORGL | Q8NRS3 from UniProtKB/TrEMBL  Length:126

    Alignment length:77
                                    49        59        69        79        89        99       109       
         Q8NRS3_CORGL    40 LSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKADTY 116
               SCOP domains ----------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhh........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------- Transcript
                 2vqg H  13 LSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKADTY  89
                                    22        32        42        52        62        72        82       


Chain I from PDB  Type:PROTEIN  Length:77
 aligned with Q8NRS3_CORGL | Q8NRS3 from UniProtKB/TrEMBL  Length:126

    Alignment length:77
                                    48        58        68        78        88        98       108       
         Q8NRS3_CORGL    39 ELSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKADT 115
               SCOP domains ----------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------- CATH domains
           Pfam domains (1) PorB-2vqgI01 I:12-88                                                          Pfam domains (1)
           Pfam domains (2) PorB-2vqgI02 I:12-88                                                          Pfam domains (2)
           Pfam domains (3) PorB-2vqgI03 I:12-88                                                          Pfam domains (3)
           Pfam domains (4) PorB-2vqgI04 I:12-88                                                          Pfam domains (4)
           Pfam domains (5) PorB-2vqgI05 I:12-88                                                          Pfam domains (5)
           Pfam domains (6) PorB-2vqgI06 I:12-88                                                          Pfam domains (6)
           Pfam domains (7) PorB-2vqgI07 I:12-88                                                          Pfam domains (7)
           Pfam domains (8) PorB-2vqgI08 I:12-88                                                          Pfam domains (8)
           Pfam domains (9) PorB-2vqgI09 I:12-88                                                          Pfam domains (9)
         Sec.struct. author .......hhhhhhhhhhhhhh........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------- Transcript
                 2vqg I  12 ELSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKADT  88
                                    21        31        41        51        61        71        81
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2VQG)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2VQG)

(-) Pfam Domains  (1, 9)

Asymmetric Unit
(-)
Clan: no clan defined [family: PorB] (4)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I   (Q8NRS3_CORGL | Q8NRS3)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8NRS3_CORGL | Q8NRS3: 2vqh 2vqk 2vql

(-) Related Entries Specified in the PDB File

2vqh CRYSTAL STRUCTURE OF PORB FROM CORYNEBACTERIUM GLUTAMICUM (CRYSTAL FORM II)
2vqk CRYSTAL STRUCTURE OF PORB FROM CORYNEBACTERIUM GLUTAMICUM (CRYSTAL FORM IV)
2vql CRYSTAL STRUCTURE OF PORB FROM CORYNEBACTERIUM GLUTAMICUM (CRYSTAL FORM III)