2QZY - JenaLib

Asymmetric Unit (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   THE STRUCTURE OF CHICKEN MITOCHONDRIAL PEPCK IN COMPLEX WITH PEP

Authors :   T. Holyoak, S. M. Sullivan, T. Nowak

Date :   17 Aug 07 (Deposition) - 04 Sep 07 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.90

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Pepck, Kinase, Decarboxylase, Gluconeogenesis, Gtp-Binding, Lyase, Manganese, Mitochondrion, Nucleotide-Binding, Transit Peptide (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   T. Holyoak, S. M. Sullivan, T. Nowak
Structural Insights Into The Mechanism Of Pepck Catalysis
Biochemistry V. 45 8254 2006
PubMed-ID: 16819824 | Reference-DOI: 10.1021/BI060269G

Molecule 1 - PHOSPHOENOLPYRUVATE CARBOXYKINASE [GTP]
	Chains	:	A, B
	EC Number	:	4.1.1.32
	Fragment	:	MATURE MITOCHONDRIAL PROTEIN, UNP RESIDUES 34-640
	Organism Common	:	CHICKEN
	Organism Scientific	:	GALLUS GALLUS
	Organism Taxid	:	9031
	Other Details	:	MATURE MITOCHONDRIAL PROTEIN
	Synonym	:	PHOSPHOENOLPYRUVATE CARBOXYLASE, PEPCK-M

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (4, 6)

No.	Name	Count	Type	Full Name
1	20S	1	Ligand/Ion	BETA-D-FRUCTOFURANOSYL 6-O-OCTANOYL-ALPHA-D-GLUCOPYRANOSIDE
2	EPE	1	Ligand/Ion	4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
3	MN	2	Ligand/Ion	MANGANESE (II) ION
4	PEP	2	Ligand/Ion	PHOSPHOENOLPYRUVATE

Biological Unit 1 (2, 2)

No.	Name	Count	Type	Full Name
1	20S	-1	Ligand/Ion	BETA-D-FRUCTOFURANOSYL 6-O-OCTANOYL-ALPHA-D-GLUCOPYRANOSIDE
2	EPE	1	Ligand/Ion	4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
3	MN	-1	Ligand/Ion	MANGANESE (II) ION
4	PEP	1	Ligand/Ion	PHOSPHOENOLPYRUVATE

Biological Unit 2 (2, 2)

No.	Name	Count	Type	Full Name
1	20S	1	Ligand/Ion	BETA-D-FRUCTOFURANOSYL 6-O-OCTANOYL-ALPHA-D-GLUCOPYRANOSIDE
2	EPE	-1	Ligand/Ion	4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
3	MN	-1	Ligand/Ion	MANGANESE (II) ION
4	PEP	1	Ligand/Ion	PHOSPHOENOLPYRUVATE

(no "Site" information available for 2QZY)

(no "SS Bond" information available for 2QZY)

Asymmetric Unit

No.	Residues
1	Leu A:219	-	Pro A:220
2	Leu B:219	-	Pro B:220

(no "SAP(SNP)/Variant" information available for 2QZY)

Asymmetric Unit (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PEPCK_GTP	PS00505	Phosphoenolpyruvate carboxykinase (GTP) signature.	PCKGM_CHICK	303-311	2	A:303-311 B:303-311

Biological Unit 1 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PEPCK_GTP	PS00505	Phosphoenolpyruvate carboxykinase (GTP) signature.	PCKGM_CHICK	303-311	1	A:303-311 -

Biological Unit 2 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PEPCK_GTP	PS00505	Phosphoenolpyruvate carboxykinase (GTP) signature.	PCKGM_CHICK	303-311	1	- B:303-311

(no "Exon" information available for 2QZY)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:596
 aligned with PCKGM_CHICK | P21642 from UniProtKB/Swiss-Prot  Length:641

    Alignment length:608
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633        
          PCKGM_CHICK    34 LSTSLSALPAAARDFVEEAVRLCRPREVLLCDGSEEEGKELLRGLQDDGVLHPLPKYDNCWLARTDPRDVARVESKTVLVTPEQSDAVPPPPPSGGPPQLGNWMSPNAFQAAVQERFPGCMAGRPLYVIPFSMGPPTSPLAKLGVQVTDSPYVVLSMRIMTRVGPAVLQRLDDDFVRCLHSVGRPLPLTEPLVSSWPCDRSPVLVAHIPSERRIVSFGSGYGGNSLLGKKCFALRIASRMAQQQGWLAEHMLILGVTSPSGEKRYMAAAFPSACGKTNLAMMTPSLPGWRIHCVGDDIAWMKFDDEGRLRAINPERGFFGVAPGTSSRTNPNAMATIARNTIFTNVGLRSDGGVYWDGLDEPTEPGVTYTSWLGKPWKHGDPEPCAHPNSRFCAPADQCPIMDPRWDDPEGVPIDAIIFGGRRPRGVPLVVEAFGWRHGVFMGSAMRSEATAAAEHKGGRLMHDPFAMRPFFGYNAGRYLEHWLSTGLRSNARLPRLFHVNWFLRDNEGRFVWPGFGHNARVLAWIFGRIQGRDTARPTPIGWVPKEGDLDLGGLPGVDYSQLFPMEKGFWEEECRQLREYYGENFGADLPRDVMAELEGLEERVRKM 641
               SCOP domains d2qzya1 A:34-278 automated matches                                                                                                                                                                                                                   d2qzya2 A:279-641 automated matches                                                                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains 2qzyA01 A:34-81,A:108-277                       --2qzyA02             ----2qzyA01 A:34-81,A:108-277 Phosphoenolpyruvate Carboxykinase, domain 1                                                                                                     -2qzyA03 A:279-349,A:435-640  [code=3.90.228.20, no name defined]       -2qzyA02 A:84-103,A:351-432 Phosphoenolpyruvate Carboxykinase, domain 2            --2qzyA03 A:279-349,A:435-640  [code=3.90.228.20,             no name defined]                                                                                                                                  - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhh..eee.......eee.........hhh.eeee..hhhhh...............eehhhhhhhhhhhhh.......eeeeeeeee........eeeeeee.hhhhhhhhhhhheehhhhhh......eeeeee.................hhhhheeeeehhh.eeeee...hhhhhh.......hhhhhhhhhhhh.eee..eeeeee.....eeeeeee.....hhhhhhh........eeeeee...eeeee.....eeee....eeeee........hhhhhhhh....eee..eee....ee.............ee.....ee.............eeeee.hhh............eeeeeeeeee........eee..hhhhhhhhhhh...------------...hhhhhhhhh..hhhhhhhhhhhhh........eeeeee.............hhhhhhhhhhhhhhhhh....eeee..eeee.............hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PEPCK_GTP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qzy A  34 LSTSLSALPAAARDFVEEAVRLCRPREVLLCDGSEEEGKELLRGLQDDGVLHPLPKYDNCWLARTDPRDVARVESKTVLVTPEQSDAVPPPPPSGGPPQLGNWMSPNAFQAAVQERFPGCMAGRPLYVIPFSMGPPTSPLAKLGVQVTDSPYVVLSMRIMTRVGPAVLQRLDDDFVRCLHSVGRPLPLTEPLVSSWPCDPSRVLVAHIPSERRIVSFGSGYGGNSLLGKKCFALRIASRMAQQQGWLAEHMLILGVTSPSGEKRYMAAAFPSACGKTNLAMMTPSLPGWRIHCVGDDIAWMKFDDEGRLRAINPERGFFGVAPGTSSRTNPNAMATIARNTIFTNVGLRSDGGVYWDGLDEPTEPGVTYTSWLGKPWKHGDPEPCAHPNSRFCAPADQCPIMDPRWDDPEGVPIDAIIFGGRRPRGVPLVVEAFGWRHGVFMGSAMRS------------LMHDPFAMRPFFGYNAGRYLEHWLSTGLRSNARLPRLFHVNWFLRDNEGRFVWPGFGHNARVLAWIFGRIQGRDTARPTPIGWVPKEGDLDLGGLPGVDYSQLFPMEKGFWEEECRQLREYYGENFGADLPRDVMAELEGLEERVRKM 641
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       | -         -|      503       513       523       533       543       553       563       573       583       593       603       613       623       633        
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         481          494

Chain B from PDB  Type:PROTEIN  Length:597
 aligned with PCKGM_CHICK | P21642 from UniProtKB/Swiss-Prot  Length:641

    Alignment length:608
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633        
          PCKGM_CHICK    34 LSTSLSALPAAARDFVEEAVRLCRPREVLLCDGSEEEGKELLRGLQDDGVLHPLPKYDNCWLARTDPRDVARVESKTVLVTPEQSDAVPPPPPSGGPPQLGNWMSPNAFQAAVQERFPGCMAGRPLYVIPFSMGPPTSPLAKLGVQVTDSPYVVLSMRIMTRVGPAVLQRLDDDFVRCLHSVGRPLPLTEPLVSSWPCDRSPVLVAHIPSERRIVSFGSGYGGNSLLGKKCFALRIASRMAQQQGWLAEHMLILGVTSPSGEKRYMAAAFPSACGKTNLAMMTPSLPGWRIHCVGDDIAWMKFDDEGRLRAINPERGFFGVAPGTSSRTNPNAMATIARNTIFTNVGLRSDGGVYWDGLDEPTEPGVTYTSWLGKPWKHGDPEPCAHPNSRFCAPADQCPIMDPRWDDPEGVPIDAIIFGGRRPRGVPLVVEAFGWRHGVFMGSAMRSEATAAAEHKGGRLMHDPFAMRPFFGYNAGRYLEHWLSTGLRSNARLPRLFHVNWFLRDNEGRFVWPGFGHNARVLAWIFGRIQGRDTARPTPIGWVPKEGDLDLGGLPGVDYSQLFPMEKGFWEEECRQLREYYGENFGADLPRDVMAELEGLEERVRKM 641
               SCOP domains d2qzyb1 B:34-278 automated matches                                                                                                                                                                                                                   d2qzyb2 B:279-641 automated matches                                                                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains 2qzyB01 B:34-81,B:108-277                       --2qzyB02             ----2qzyB01 B:34-81,B:108-277 Phosphoenolpyruvate Carboxykinase, domain 1                                                                                                     -2qzyB03 B:279-349,B:435-639  [code=3.90.228.20, no name defined]       -2qzyB02 B:84-103,B:351-432 Phosphoenolpyruvate Carboxykinase, domain 2            --2qzyB03 B:279-349,B:435-639  [code=3.90.228.20,            no name defined]                                                                                                                                  -- CATH domains
           Pfam domains (1) -------------PEPCK-2qzyB01 B:47-641                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              Pfam domains (1)
           Pfam domains (2) -------------PEPCK-2qzyB02 B:47-641                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              Pfam domains (2)
         Sec.struct. author ........hhhhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhh..eee.......eee.........hhh.eeee..hhhhhh..............eehhhhhhhhhhhhh.......eeeeeeeee........eeeeeee.hhhhhhhhhhhh..hhhhhh......eeeeee.................hhhhheeeeehhh.eeeee...hhhhhh.......hhhhhhhhhhhh.eee..eeeeee.....eeeeeee.....hhhhhhh........eeeeee...eeeee.....eeee....eeeee........hhhhhhhh....eee..eee....ee.............ee.....ee.............eeeee.hhh............eeeeeeeeee........eee..hhhhhhhhhhh.ee.-----------.ee.hhhhhhhh..hhhhhhhhhhhhh........eeeeee.............hhhhhhhhhhhhhhhhh....eeee..eeee.............hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PEPCK_GTP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qzy B  34 LSTSLSALPAAARDFVEEAVRLCRPREVLLCDGSEEEGKELLRGLQDDGVLHPLPKYDNCWLARTDPRDVARVESKTVLVTPEQSDAVPPPPPSGGPPQLGNWMSPNAFQAAVQERFPGCMAGRPLYVIPFSMGPPTSPLAKLGVQVTDSPYVVLSMRIMTRVGPAVLQRLDDDFVRCLHSVGRPLPLTEPLVSSWPCDPSRVLVAHIPSERRIVSFGSGYGGNSLLGKKCFALRIASRMAQQQGWLAEHMLILGVTSPSGEKRYMAAAFPSACGKTNLAMMTPSLPGWRIHCVGDDIAWMKFDDEGRLRAINPERGFFGVAPGTSSRTNPNAMATIARNTIFTNVGLRSDGGVYWDGLDEPTEPGVTYTSWLGKPWKHGDPEPCAHPNSRFCAPADQCPIMDPRWDDPEGVPIDAIIFGGRRPRGVPLVVEAFGWRHGVFMGSAMRSE-----------LMHDPFAMRPFFGYNAGRYLEHWLSTGLRSNARLPRLFHVNWFLRDNEGRFVWPGFGHNARVLAWIFGRIQGRDTARPTPIGWVPKEGDLDLGGLPGVDYSQLFPMEKGFWEEECRQLREYYGENFGADLPRDVMAELEGLEERVRKM 641
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473        |-         -|      503       513       523       533       543       553       563       573       583       593       603       613       623       633        
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          482         494

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: PEP carboxykinase N-terminal domain (54)

Superfamily: PEP carboxykinase N-terminal domain (54)

Family: automated matches (6)

Protein domain: automated matches (6)

Chicken (Gallus gallus) [TaxId: 9031] (3)

1a	d2qzya1	A:34-278
1b	d2qzyb1	B:34-278

Fold: PEP carboxykinase-like (61)

Superfamily: PEP carboxykinase-like (61)

Family: automated matches (7)

Protein domain: automated matches (7)

Chicken (Gallus gallus) [TaxId: 9031] (3)

2a	d2qzya2	A:279-641
2b	d2qzyb2	B:279-641

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Phosphoenolpyruvate Carboxykinase; domain 1 (42)

Homologous Superfamily: Phosphoenolpyruvate Carboxykinase, domain 1 (42)

Chicken (Gallus gallus) (3)

1a	2qzyA01	A:34-81,A:108-277
1b	2qzyB01	B:34-81,B:108-277

Architecture: Alpha-Beta Complex (3881)

Topology: Phosphoenolpyruvate Carboxykinase; domain 3 (62)

Homologous Superfamily: [code=3.90.228.20, no name defined] (42)

Chicken (Gallus gallus) (3)

2a	2qzyA03	A:279-349,A:435-640
2b	2qzyB03	B:279-349,B:435-639

Class: Mainly Beta (13760)

Architecture: Beta Complex (381)

Topology: Phosphoenolpyruvate Carboxykinase; domain 2 (42)

Homologous Superfamily: Phosphoenolpyruvate Carboxykinase, domain 2 (42)

Chicken (Gallus gallus) (3)

3a	2qzyA02	A:84-103,A:351-432
3b	2qzyB02	B:84-103,B:351-432

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: PEP-carboxyk (36)

Family: PEPCK (19)

Gallus gallus (Chicken) (1)

1a	PEPCK-2qzyB01	B:47-641
1b	PEPCK-2qzyB02	B:47-641

Asymmetric Unit(hide GO term definitions)

Chain A,B (PCKGM_CHICK | P21642)

molecular function
	GO:0005525	GTP binding	Interacting selectively and non-covalently with GTP, guanosine triphosphate.
	GO:0016831	carboxy-lyase activity	Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound.
	GO:0016829	lyase activity	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0004613	phosphoenolpyruvate carboxykinase (GTP) activity	Catalysis of the reaction: GTP + oxaloacetate = GDP + phosphoenolpyruvate + CO2.
	GO:0004611	phosphoenolpyruvate carboxykinase activity	Catalysis of the reaction: source of phosphate + oxaloacetate = phosphoenolpyruvate + CO2 + other reaction products.
	GO:0017076	purine nucleotide binding	Interacting selectively and non-covalently with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate.
biological process
	GO:0006094	gluconeogenesis	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol.
cellular component
	GO:0005759	mitochondrial matrix	The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
	GO:0005739	mitochondrion	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		20S	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		EPE	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		MN	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		PEP	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
(no "Sites" information available for 2qzy)

	Cis Peptide Bonds
		Leu A:219 - Pro A:220	[ RasMol ]
		Leu B:219 - Pro B:220	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	2qzy
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	PCKGM_CHICK \| P21642
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	4.1.1.32
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	PCKGM_CHICK \| P21642
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	PCKGM_CHICK \| P21642	:	2faf 2fah

2faf	CHICKEN MPEPCK HOLOENZYME
2fah	CHICKEN MPEPCK IN COMPLEX WITH MALONIC ACID AND GDP

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 6)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 2)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 4)

CATH Domains (3, 6)

Pfam Domains (1, 2)

Gene Ontology (11, 11)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File