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Sequence, Chains, Asymmetric and Biological Units

Title THE STRUCTURE OF CHICKEN MITOCHONDRIAL PEPCK IN COMPLEX WITH
Keywords PEPCK, KINASE, DECARBOXYLASE, GLUCONEOGENESIS, GTP-BINDING, MANGANESE, MITOCHONDRION, NUCLEOTIDE-BINDING, TRANSIT PEPTI
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2QZY     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PHOSPHOENOLPYRUVATE CARBOXYKINASE [GTP]  A 596 4653 0
2  Protein   PHOSPHOENOLPYRUVATE CARBOXYKINASE [GTP]  B 597 4662 0
3  Ligand    C 2 0 32
4  Ligand   PHOSPHOENOLPYRUVATE CARBOXYKINASE [GTP]  A 3 0 26
5  Ligand   PHOSPHOENOLPYRUVATE CARBOXYKINASE [GTP]  B 2 0 11
6 Water     996 0 996
total       2196 9315 1065
Proteins
Unit 1 LEU34 SER35 THR36 SER37 LEU38 SER39 ALA40 LEU41 PRO42 ALA43 ALA44 ALA45 ARG46 ASP47 PHE48 VAL49 GLU50 GLU51 ALA52 VAL53 ARG54 LEU55 CYS56 ARG57 PRO58 ARG59 GLU60 VAL61 LEU62 LEU63 CYS64 ASP65 GLY66 SER67 GLU68 GLU69 GLU70 GLY71 LYS72 GLU73 LEU74 LEU75 ARG76 GLY77 LEU78 GLN79 ASP80 ASP81 GLY82 VAL83 LEU84 HIS85 PRO86 LEU87 PRO88 LYS89 TYR90 ASP91 ASN92 CYS93 TRP94 LEU95 ALA96 ARG97 THR98 ASP99 PRO100 ARG101 ASP102 VAL103 ALA104 ARG105 VAL106 GLU107 SER108 LYS109 THR110 VAL111 LEU112 VAL113 THR114 PRO115 GLU116 GLN117 SER118 ASP119 ALA120 VAL121 PRO122 PRO123 PRO124 PRO125 PRO126 SER127 GLY128 GLY129 PRO130 PRO131 GLN132 LEU133 GLY134 ASN135 TRP136 MET137 SER138 PRO139 ASN140 ALA141 PHE142 GLN143 ALA144 ALA145 VAL146 GLN147 GLU148 ARG149 PHE150 PRO151 GLY152 CYS153 MET154 ALA155 GLY156 ARG157 PRO158 LEU159 TYR160 VAL161 ILE162 PRO163 PHE164 SER165 MET166 GLY167 PRO168 PRO169 THR170 SER171 PRO172 LEU173 ALA174 LYS175 LEU176 GLY177 VAL178 GLN179 VAL180 THR181 ASP182 SER183 PRO184 TYR185 VAL186 VAL187 LEU188 SER189 MET190 ARG191 ILE192 MET193 THR194 ARG195 VAL196 GLY197 PRO198 ALA199 VAL200 LEU201 GLN202 ARG203 LEU204 ASP205 ASP206 ASP207 PHE208 VAL209 ARG210 CYS211 LEU212 HIS213 SER214 VAL215 GLY216 ARG217 PRO218 LEU219 PRO220 LEU221 THR222 GLU223 PRO224 LEU225 VAL226 SER227 SER228 TRP229 PRO230 CYS231 ASP232 PRO233 SER234 ARG235 VAL236 LEU237 VAL238 ALA239 HIS240 ILE241 PRO242 SER243 GLU244 ARG245 ARG246 ILE247 VAL248 SER249 PHE250 GLY251 SER252 GLY253 TYR254 GLY255 GLY256 ASN257 SER258 LEU259 LEU260 GLY261 LYS262 LYS263 CYS264 PHE265 ALA266 LEU267 ARG268 ILE269 ALA270 SER271 ARG272 MET273 ALA274 GLN275 GLN276 GLN277 GLY278 TRP279 LEU280 ALA281 GLU282 HIS283 MET284 LEU285 ILE286 LEU287 GLY288 VAL289 THR290 SER291 PRO292 SER293 GLY294 GLU295 LYS296 ARG297 TYR298 MET299 ALA300 ALA301 ALA302 PHE303 PRO304 SER305 ALA306 CYS307 GLY308 LYS309 THR310 ASN311 LEU312 ALA313 MET314 MET315 THR316 PRO317 SER318 LEU319 PRO320 GLY321 TRP322 ARG323 ILE324 HIS325 CYS326 VAL327 GLY328 ASP329 ASP330 ILE331 ALA332 TRP333 MET334 LYS335 PHE336 ASP337 ASP338 GLU339 GLY340 ARG341 LEU342 ARG343 ALA344 ILE345 ASN346 PRO347 GLU348 ARG349 GLY350 PHE351 PHE352 GLY353 VAL354 ALA355 PRO356 GLY357 THR358 SER359 SER360 ARG361 THR362 ASN363 PRO364 ASN365 ALA366 MET367 ALA368 THR369 ILE370 ALA371 ARG372 ASN373 THR374 ILE375 PHE376 THR377 ASN378 VAL379 GLY380 LEU381 ARG382 SER383 ASP384 GLY385 GLY386 VAL387 TYR388 TRP389 ASP390 GLY391 LEU392 ASP393 GLU394 PRO395 THR396 GLU397 PRO398 GLY399 VAL400 THR401 TYR402 THR403 SER404 TRP405 LEU406 GLY407 LYS408 PRO409 TRP410 LYS411 HIS412 GLY413 ASP414 PRO415 GLU416 PRO417 CYS418 ALA419 HIS420 PRO421 ASN422 SER423 ARG424 PHE425 CYS426 ALA427 PRO428 ALA429 ASP430 GLN431 CYS432 PRO433 ILE434 MET435 ASP436 PRO437 ARG438 TRP439 ASP440 ASP441 PRO442 GLU443 GLY444 VAL445 PRO446 ILE447 ASP448 ALA449 ILE450 ILE451 PHE452 GLY453 GLY454 ARG455 ARG456 PRO457 ARG458 GLY459 VAL460 PRO461 LEU462 VAL463 VAL464 GLU465 ALA466 PHE467 GLY468 TRP469 ARG470 HIS471 GLY472 VAL473 PHE474 MET475 GLY476 SER477 ALA478 MET479 ARG480 SER481 LEU494 MET495 HIS496 ASP497 PRO498 PHE499 ALA500 MET501 ARG502 PRO503 PHE504 PHE505 GLY506 TYR507 ASN508 ALA509 GLY510 ARG511 TYR512 LEU513 GLU514 HIS515 TRP516 LEU517 SER518 THR519 GLY520 LEU521 ARG522 SER523 ASN524 ALA525 ARG526 LEU527 PRO528 ARG529 LEU530 PHE531 HIS532 VAL533 ASN534 TRP535 PHE536 LEU537 ARG538 ASP539 ASN540 GLU541 GLY542 ARG543 PHE544 VAL545 TRP546 PRO547 GLY548 PHE549 GLY550 HIS551 ASN552 ALA553 ARG554 VAL555 LEU556 ALA557 TRP558 ILE559 PHE560 GLY561 ARG562 ILE563 GLN564 GLY565 ARG566 ASP567 THR568 ALA569 ARG570 PRO571 THR572 PRO573 ILE574 GLY575 TRP576 VAL577 PRO578 LYS579 GLU580 GLY581 ASP582 LEU583 ASP584 LEU585 GLY586 GLY587 LEU588 PRO589 GLY590 VAL591 ASP592 TYR593 SER594 GLN595 LEU596 PHE597 PRO598 MET599 GLU600 LYS601 GLY602 PHE603 TRP604 GLU605 GLU606 GLU607 CYS608 ARG609 GLN610 LEU611 ARG612 GLU613 TYR614 TYR615 GLY616 GLU617 ASN618 PHE619 GLY620 ALA621 ASP622 LEU623 PRO624 ARG625 ASP626 VAL627 MET628 ALA629 GLU630 LEU631 GLU632 GLY633 LEU634 GLU635 GLU636 ARG637 VAL638 ARG639 LYS640 MET641
Unit 2 LEU34 SER35 THR36 SER37 LEU38 SER39 ALA40 LEU41 PRO42 ALA43 ALA44 ALA45 ARG46 ASP47 PHE48 VAL49 GLU50 GLU51 ALA52 VAL53 ARG54 LEU55 CYS56 ARG57 PRO58 ARG59 GLU60 VAL61 LEU62 LEU63 CYS64 ASP65 GLY66 SER67 GLU68 GLU69 GLU70 GLY71 LYS72 GLU73 LEU74 LEU75 ARG76 GLY77 LEU78 GLN79 ASP80 ASP81 GLY82 VAL83 LEU84 HIS85 PRO86 LEU87 PRO88 LYS89 TYR90 ASP91 ASN92 CYS93 TRP94 LEU95 ALA96 ARG97 THR98 ASP99 PRO100 ARG101 ASP102 VAL103 ALA104 ARG105 VAL106 GLU107 SER108 LYS109 THR110 VAL111 LEU112 VAL113 THR114 PRO115 GLU116 GLN117 SER118 ASP119 ALA120 VAL121 PRO122 PRO123 PRO124 PRO125 PRO126 SER127 GLY128 GLY129 PRO130 PRO131 GLN132 LEU133 GLY134 ASN135 TRP136 MET137 SER138 PRO139 ASN140 ALA141 PHE142 GLN143 ALA144 ALA145 VAL146 GLN147 GLU148 ARG149 PHE150 PRO151 GLY152 CYS153 MET154 ALA155 GLY156 ARG157 PRO158 LEU159 TYR160 VAL161 ILE162 PRO163 PHE164 SER165 MET166 GLY167 PRO168 PRO169 THR170 SER171 PRO172 LEU173 ALA174 LYS175 LEU176 GLY177 VAL178 GLN179 VAL180 THR181 ASP182 SER183 PRO184 TYR185 VAL186 VAL187 LEU188 SER189 MET190 ARG191 ILE192 MET193 THR194 ARG195 VAL196 GLY197 PRO198 ALA199 VAL200 LEU201 GLN202 ARG203 LEU204 ASP205 ASP206 ASP207 PHE208 VAL209 ARG210 CYS211 LEU212 HIS213 SER214 VAL215 GLY216 ARG217 PRO218 LEU219 PRO220 LEU221 THR222 GLU223 PRO224 LEU225 VAL226 SER227 SER228 TRP229 PRO230 CYS231 ASP232 PRO233 SER234 ARG235 VAL236 LEU237 VAL238 ALA239 HIS240 ILE241 PRO242 SER243 GLU244 ARG245 ARG246 ILE247 VAL248 SER249 PHE250 GLY251 SER252 GLY253 TYR254 GLY255 GLY256 ASN257 SER258 LEU259 LEU260 GLY261 LYS262 LYS263 CYS264 PHE265 ALA266 LEU267 ARG268 ILE269 ALA270 SER271 ARG272 MET273 ALA274 GLN275 GLN276 GLN277 GLY278 TRP279 LEU280 ALA281 GLU282 HIS283 MET284 LEU285 ILE286 LEU287 GLY288 VAL289 THR290 SER291 PRO292 SER293 GLY294 GLU295 LYS296 ARG297 TYR298 MET299 ALA300 ALA301 ALA302 PHE303 PRO304 SER305 ALA306 CYS307 GLY308 LYS309 THR310 ASN311 LEU312 ALA313 MET314 MET315 THR316 PRO317 SER318 LEU319 PRO320 GLY321 TRP322 ARG323 ILE324 HIS325 CYS326 VAL327 GLY328 ASP329 ASP330 ILE331 ALA332 TRP333 MET334 LYS335 PHE336 ASP337 ASP338 GLU339 GLY340 ARG341 LEU342 ARG343 ALA344 ILE345 ASN346 PRO347 GLU348 ARG349 GLY350 PHE351 PHE352 GLY353 VAL354 ALA355 PRO356 GLY357 THR358 SER359 SER360 ARG361 THR362 ASN363 PRO364 ASN365 ALA366 MET367 ALA368 THR369 ILE370 ALA371 ARG372 ASN373 THR374 ILE375 PHE376 THR377 ASN378 VAL379 GLY380 LEU381 ARG382 SER383 ASP384 GLY385 GLY386 VAL387 TYR388 TRP389 ASP390 GLY391 LEU392 ASP393 GLU394 PRO395 THR396 GLU397 PRO398 GLY399 VAL400 THR401 TYR402 THR403 SER404 TRP405 LEU406 GLY407 LYS408 PRO409 TRP410 LYS411 HIS412 GLY413 ASP414 PRO415 GLU416 PRO417 CYS418 ALA419 HIS420 PRO421 ASN422 SER423 ARG424 PHE425 CYS426 ALA427 PRO428 ALA429 ASP430 GLN431 CYS432 PRO433 ILE434 MET435 ASP436 PRO437 ARG438 TRP439 ASP440 ASP441 PRO442 GLU443 GLY444 VAL445 PRO446 ILE447 ASP448 ALA449 ILE450 ILE451 PHE452 GLY453 GLY454 ARG455 ARG456 PRO457 ARG458 GLY459 VAL460 PRO461 LEU462 VAL463 VAL464 GLU465 ALA466 PHE467 GLY468 TRP469 ARG470 HIS471 GLY472 VAL473 PHE474 MET475 GLY476 SER477 ALA478 MET479 ARG480 SER481 GLU482 LEU494 MET495 HIS496 ASP497 PRO498 PHE499 ALA500 MET501 ARG502 PRO503 PHE504 PHE505 GLY506 TYR507 ASN508 ALA509 GLY510 ARG511 TYR512 LEU513 GLU514 HIS515 TRP516 LEU517 SER518 THR519 GLY520 LEU521 ARG522 SER523 ASN524 ALA525 ARG526 LEU527 PRO528 ARG529 LEU530 PHE531 HIS532 VAL533 ASN534 TRP535 PHE536 LEU537 ARG538 ASP539 ASN540 GLU541 GLY542 ARG543 PHE544 VAL545 TRP546 PRO547 GLY548 PHE549 GLY550 HIS551 ASN552 ALA553 ARG554 VAL555 LEU556 ALA557 TRP558 ILE559 PHE560 GLY561 ARG562 ILE563 GLN564 GLY565 ARG566 ASP567 THR568 ALA569 ARG570 PRO571 THR572 PRO573 ILE574 GLY575 TRP576 VAL577 PRO578 LYS579 GLU580 GLY581 ASP582 LEU583 ASP584 LEU585 GLY586 GLY587 LEU588 PRO589 GLY590 VAL591 ASP592 TYR593 SER594 GLN595 LEU596 PHE597 PRO598 MET599 GLU600 LYS601 GLY602 PHE603 TRP604 GLU605 GLU606 GLU607 CYS608 ARG609 GLN610 LEU611 ARG612 GLU613 TYR614 TYR615 GLY616 GLU617 ASN618 PHE619 GLY620 ALA621 ASP622 LEU623 PRO624 ARG625 ASP626 VAL627 MET628 ALA629 GLU630 LEU631 GLU632 GLY633 LEU634 GLU635 GLU636 ARG637 VAL638 ARG639 LYS640 MET641
Ligands
Unit 3 TQY1 FRU2
Unit 4 EPE1002 MN1101 PEP1102
Unit 5 MN1201 PEP1202
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany