Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym.Unit - manually
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
(-)Biological Unit 3
(-)Biological Unit 4
collapse expand < >
Image Asym.Unit - manually
Asym.Unit - manually  (Jmol Viewer)
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)
Image Biological Unit 3
Biological Unit 3  (Jmol Viewer)
Image Biological Unit 4
Biological Unit 4  (Jmol Viewer)

(-) Description

Title :  2.2 ANGSTROM STRUCTURE OF THE HUMAN FERROCHELATASE VARIANT E343K WITH SUBSTRATE BOUND
 
Authors :  A. E. Medlock, T. A. Dailey, T. A. Ross, H. A. Dailey, W. N. Lanzilotta
Date :  20 Jun 07  (Deposition) - 30 Oct 07  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Ferrochelatase, Heme Biosynthesis, Protopophyrin Ix, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  A. E. Medlock, T. A. Dailey, T. A. Ross, H. A. Dailey, W. N. Lanzilotta
A Pi-Helix Switch Selective For Porphyrin Deprotonation And Product Release In Human Ferrochelatase.
J. Mol. Biol. V. 373 1006 2007
PubMed-ID: 17884090  |  Reference-DOI: 10.1016/J.JMB.2007.08.040
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - FERROCHELATASE
    ChainsA, B, C, D
    EC Number4.99.1.1
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneFECH
    MutationYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymPROTOHEME FERRO-LYASE, HEME SYNTHETASE

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit ABCD
Biological Unit 1 (1x)A   
Biological Unit 2 (1x) B  
Biological Unit 3 (1x)  C 
Biological Unit 4 (1x)   D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 13)

Asymmetric Unit (4, 13)
No.NameCountTypeFull Name
1CHD2Ligand/IonCHOLIC ACID
2FES4Ligand/IonFE2/S2 (INORGANIC) CLUSTER
3IMD1Ligand/IonIMIDAZOLE
4PP96Ligand/IonPROTOPORPHYRIN IX
Biological Unit 1 (2, 2)
No.NameCountTypeFull Name
1CHD-1Ligand/IonCHOLIC ACID
2FES1Ligand/IonFE2/S2 (INORGANIC) CLUSTER
3IMD-1Ligand/IonIMIDAZOLE
4PP91Ligand/IonPROTOPORPHYRIN IX
Biological Unit 2 (2, 2)
No.NameCountTypeFull Name
1CHD-1Ligand/IonCHOLIC ACID
2FES1Ligand/IonFE2/S2 (INORGANIC) CLUSTER
3IMD-1Ligand/IonIMIDAZOLE
4PP91Ligand/IonPROTOPORPHYRIN IX
Biological Unit 3 (2, 2)
No.NameCountTypeFull Name
1CHD-1Ligand/IonCHOLIC ACID
2FES1Ligand/IonFE2/S2 (INORGANIC) CLUSTER
3IMD-1Ligand/IonIMIDAZOLE
4PP91Ligand/IonPROTOPORPHYRIN IX
Biological Unit 4 (4, 7)
No.NameCountTypeFull Name
1CHD2Ligand/IonCHOLIC ACID
2FES1Ligand/IonFE2/S2 (INORGANIC) CLUSTER
3IMD1Ligand/IonIMIDAZOLE
4PP93Ligand/IonPROTOPORPHYRIN IX

(-) Sites  (13, 13)

Asymmetric Unit (13, 13)
No.NameEvidenceResiduesDescription
01AC1SOFTWARECYS A:196 , SER A:402 , CYS A:403 , CYS A:406 , CYS A:411 , HOH A:1043BINDING SITE FOR RESIDUE FES A 1001
02AC2SOFTWARECYS B:196 , SER B:402 , CYS B:403 , CYS B:406 , CYS B:411BINDING SITE FOR RESIDUE FES B 1002
03AC3SOFTWARECYS C:196 , ARG C:272 , SER C:402 , CYS C:403 , CYS C:406 , CYS C:411BINDING SITE FOR RESIDUE FES C 1003
04AC4SOFTWARECYS D:196 , ARG D:272 , SER D:402 , CYS D:403 , CYS D:406 , CYS D:411BINDING SITE FOR RESIDUE FES D 1004
05AC5SOFTWAREMET A:76 , GLY A:77 , GLY A:78 , PHE A:88 , LEU A:92 , LEU A:98 , ARG A:115 , ILE A:119 , TYR A:123 , SER A:130 , TYR A:191 , SER A:197 , THR A:198 , HIS A:263 , LEU A:265 , TYR A:276 , VAL A:305 , TRP A:310 , HIS A:341 , ILE A:342 , LYS A:343 , HOH A:1097 , HOH A:1115BINDING SITE FOR RESIDUE PP9 A 701
06AC6SOFTWAREMET B:76 , GLY B:78 , PHE B:88 , LEU B:89 , LEU B:92 , LEU B:98 , MET B:99 , ARG B:115 , ILE B:119 , TYR B:123 , SER B:130 , THR B:198 , HIS B:263 , TYR B:276 , VAL B:305 , ALA B:336 , HIS B:341 , ILE B:342 , LYS B:343 , HOH B:1135 , HOH B:1153BINDING SITE FOR RESIDUE PP9 B 702
07AC7SOFTWAREILE C:111 , ARG C:114 , PRO C:307 , MET C:308 , HOH C:1084 , PRO D:102 , PHE D:110 , ARG D:114 , PP9 D:704 , CHD D:801 , HOH D:1136BINDING SITE FOR RESIDUE PP9 D 703
08AC8SOFTWAREPRO C:102 , LEU C:107 , PHE C:110 , ILE D:111 , ARG D:114 , PRO D:307 , MET D:308 , PP9 D:703 , CHD D:802 , HOH D:1110BINDING SITE FOR RESIDUE PP9 D 704
09AC9SOFTWAREMET C:76 , GLY C:77 , GLY C:78 , PHE C:88 , PHE C:93 , LEU C:98 , MET C:99 , ARG C:115 , ILE C:119 , TYR C:123 , SER C:130 , TYR C:191 , SER C:197 , THR C:198 , HIS C:263 , ALA C:336 , PHE C:337 , HIS C:341 , ILE C:342 , LYS C:343 , HOH C:1042 , HOH C:1074BINDING SITE FOR RESIDUE PP9 C 705
10BC1SOFTWAREMET D:76 , GLY D:77 , GLY D:78 , PHE D:88 , LEU D:89 , LEU D:92 , PHE D:93 , LEU D:98 , ARG D:115 , ILE D:119 , TYR D:123 , SER D:130 , TYR D:191 , THR D:198 , HIS D:263 , PRO D:266 , VAL D:305 , TRP D:310 , ALA D:336 , PHE D:337 , HIS D:341 , ILE D:342 , LYS D:343 , HOH D:1064 , HOH D:1090BINDING SITE FOR RESIDUE PP9 D 706
11BC2SOFTWAREARG C:115 , PRO C:307 , HOH C:1054 , HOH C:1084 , PP9 D:703 , HOH D:1136BINDING SITE FOR RESIDUE CHD D 801
12BC3SOFTWAREHOH C:1106 , ARG D:115 , GLY D:306 , PRO D:307 , PP9 D:704BINDING SITE FOR RESIDUE CHD D 802
13BC4SOFTWAREPRO B:277 , PRO D:277 , SER D:281 , TRP D:301 , HOH D:1160BINDING SITE FOR RESIDUE IMD D 901

(-) SS Bonds  (2, 2)

Asymmetric Unit
No.Residues
1A:323 -A:360
2B:323 -B:360

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1His A:167 -Pro A:168
2Gly A:312 -Pro A:313
3His B:167 -Pro B:168
4Gly B:312 -Pro B:313
5His C:167 -Pro C:168
6Gly C:312 -Pro C:313
7His D:167 -Pro D:168
8Gly D:312 -Pro D:313

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (22, 88)

Asymmetric Unit (22, 88)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_030554I71KHEMH_HUMANDisease (EPP)  ---A/B/C/DI71K
02UniProtVAR_012028R96QHEMH_HUMANPolymorphism1041951A/B/C/DR96Q
03UniProtVAR_030555Q139LHEMH_HUMANDisease (EPP)  ---A/B/C/DQ139L
04UniProtVAR_030556S151PHEMH_HUMANDisease (EPP)  ---A/B/C/DS151P
05UniProtVAR_030557E178KHEMH_HUMANDisease (EPP)  ---A/B/C/DE178K
06UniProtVAR_030558L182RHEMH_HUMANDisease (EPP)  ---A/B/C/DL182R
07UniProtVAR_002384I186THEMH_HUMANDisease (EPP)  ---A/B/C/DI186T
08UniProtVAR_030559Y191HHEMH_HUMANDisease (EPP)  ---A/B/C/DY191H
09UniProtVAR_030560P192THEMH_HUMANDisease (EPP)  ---A/B/C/DP192T
10UniProtVAR_030561C236YHEMH_HUMANDisease (EPP)761962617A/B/C/DC236Y
11UniProtVAR_030562F260LHEMH_HUMANDisease (EPP)  ---A/B/C/DF260L
12UniProtVAR_054629S264LHEMH_HUMANDisease (EPP)  ---A/B/C/DS264L
13UniProtVAR_002385M267IHEMH_HUMANDisease (EPP)118204037A/B/C/DM267I
14UniProtVAR_030563T283IHEMH_HUMANDisease (EPP)  ---A/B/C/DT283I
15UniProtVAR_030564M288KHEMH_HUMANDisease (EPP)  ---A/B/C/DM288K
16UniProtVAR_030565P334LHEMH_HUMANDisease (EPP)150146721A/B/C/DP334L
17UniProtVAR_030566V362GHEMH_HUMANDisease (EPP)118204040A/B/C/DV362G
18UniProtVAR_030567K379NHEMH_HUMANDisease (EPP)  ---A/B/C/DK379N
19UniProtVAR_002386H386PHEMH_HUMANDisease (EPP)  ---A/B/C/DH386P
20UniProtVAR_030568C406SHEMH_HUMANDisease (EPP)  ---A/B/C/DC406S
21UniProtVAR_030569C406YHEMH_HUMANDisease (EPP)  ---A/B/C/DC406Y
22UniProtVAR_002387F417SHEMH_HUMANDisease (EPP)118204039A/B/C/DF417S

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (22, 22)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_030554I71KHEMH_HUMANDisease (EPP)  ---AI71K
02UniProtVAR_012028R96QHEMH_HUMANPolymorphism1041951AR96Q
03UniProtVAR_030555Q139LHEMH_HUMANDisease (EPP)  ---AQ139L
04UniProtVAR_030556S151PHEMH_HUMANDisease (EPP)  ---AS151P
05UniProtVAR_030557E178KHEMH_HUMANDisease (EPP)  ---AE178K
06UniProtVAR_030558L182RHEMH_HUMANDisease (EPP)  ---AL182R
07UniProtVAR_002384I186THEMH_HUMANDisease (EPP)  ---AI186T
08UniProtVAR_030559Y191HHEMH_HUMANDisease (EPP)  ---AY191H
09UniProtVAR_030560P192THEMH_HUMANDisease (EPP)  ---AP192T
10UniProtVAR_030561C236YHEMH_HUMANDisease (EPP)761962617AC236Y
11UniProtVAR_030562F260LHEMH_HUMANDisease (EPP)  ---AF260L
12UniProtVAR_054629S264LHEMH_HUMANDisease (EPP)  ---AS264L
13UniProtVAR_002385M267IHEMH_HUMANDisease (EPP)118204037AM267I
14UniProtVAR_030563T283IHEMH_HUMANDisease (EPP)  ---AT283I
15UniProtVAR_030564M288KHEMH_HUMANDisease (EPP)  ---AM288K
16UniProtVAR_030565P334LHEMH_HUMANDisease (EPP)150146721AP334L
17UniProtVAR_030566V362GHEMH_HUMANDisease (EPP)118204040AV362G
18UniProtVAR_030567K379NHEMH_HUMANDisease (EPP)  ---AK379N
19UniProtVAR_002386H386PHEMH_HUMANDisease (EPP)  ---AH386P
20UniProtVAR_030568C406SHEMH_HUMANDisease (EPP)  ---AC406S
21UniProtVAR_030569C406YHEMH_HUMANDisease (EPP)  ---AC406Y
22UniProtVAR_002387F417SHEMH_HUMANDisease (EPP)118204039AF417S

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (22, 22)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_030554I71KHEMH_HUMANDisease (EPP)  ---BI71K
02UniProtVAR_012028R96QHEMH_HUMANPolymorphism1041951BR96Q
03UniProtVAR_030555Q139LHEMH_HUMANDisease (EPP)  ---BQ139L
04UniProtVAR_030556S151PHEMH_HUMANDisease (EPP)  ---BS151P
05UniProtVAR_030557E178KHEMH_HUMANDisease (EPP)  ---BE178K
06UniProtVAR_030558L182RHEMH_HUMANDisease (EPP)  ---BL182R
07UniProtVAR_002384I186THEMH_HUMANDisease (EPP)  ---BI186T
08UniProtVAR_030559Y191HHEMH_HUMANDisease (EPP)  ---BY191H
09UniProtVAR_030560P192THEMH_HUMANDisease (EPP)  ---BP192T
10UniProtVAR_030561C236YHEMH_HUMANDisease (EPP)761962617BC236Y
11UniProtVAR_030562F260LHEMH_HUMANDisease (EPP)  ---BF260L
12UniProtVAR_054629S264LHEMH_HUMANDisease (EPP)  ---BS264L
13UniProtVAR_002385M267IHEMH_HUMANDisease (EPP)118204037BM267I
14UniProtVAR_030563T283IHEMH_HUMANDisease (EPP)  ---BT283I
15UniProtVAR_030564M288KHEMH_HUMANDisease (EPP)  ---BM288K
16UniProtVAR_030565P334LHEMH_HUMANDisease (EPP)150146721BP334L
17UniProtVAR_030566V362GHEMH_HUMANDisease (EPP)118204040BV362G
18UniProtVAR_030567K379NHEMH_HUMANDisease (EPP)  ---BK379N
19UniProtVAR_002386H386PHEMH_HUMANDisease (EPP)  ---BH386P
20UniProtVAR_030568C406SHEMH_HUMANDisease (EPP)  ---BC406S
21UniProtVAR_030569C406YHEMH_HUMANDisease (EPP)  ---BC406Y
22UniProtVAR_002387F417SHEMH_HUMANDisease (EPP)118204039BF417S

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 3 (22, 22)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_030554I71KHEMH_HUMANDisease (EPP)  ---CI71K
02UniProtVAR_012028R96QHEMH_HUMANPolymorphism1041951CR96Q
03UniProtVAR_030555Q139LHEMH_HUMANDisease (EPP)  ---CQ139L
04UniProtVAR_030556S151PHEMH_HUMANDisease (EPP)  ---CS151P
05UniProtVAR_030557E178KHEMH_HUMANDisease (EPP)  ---CE178K
06UniProtVAR_030558L182RHEMH_HUMANDisease (EPP)  ---CL182R
07UniProtVAR_002384I186THEMH_HUMANDisease (EPP)  ---CI186T
08UniProtVAR_030559Y191HHEMH_HUMANDisease (EPP)  ---CY191H
09UniProtVAR_030560P192THEMH_HUMANDisease (EPP)  ---CP192T
10UniProtVAR_030561C236YHEMH_HUMANDisease (EPP)761962617CC236Y
11UniProtVAR_030562F260LHEMH_HUMANDisease (EPP)  ---CF260L
12UniProtVAR_054629S264LHEMH_HUMANDisease (EPP)  ---CS264L
13UniProtVAR_002385M267IHEMH_HUMANDisease (EPP)118204037CM267I
14UniProtVAR_030563T283IHEMH_HUMANDisease (EPP)  ---CT283I
15UniProtVAR_030564M288KHEMH_HUMANDisease (EPP)  ---CM288K
16UniProtVAR_030565P334LHEMH_HUMANDisease (EPP)150146721CP334L
17UniProtVAR_030566V362GHEMH_HUMANDisease (EPP)118204040CV362G
18UniProtVAR_030567K379NHEMH_HUMANDisease (EPP)  ---CK379N
19UniProtVAR_002386H386PHEMH_HUMANDisease (EPP)  ---CH386P
20UniProtVAR_030568C406SHEMH_HUMANDisease (EPP)  ---CC406S
21UniProtVAR_030569C406YHEMH_HUMANDisease (EPP)  ---CC406Y
22UniProtVAR_002387F417SHEMH_HUMANDisease (EPP)118204039CF417S

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 4 (22, 22)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_030554I71KHEMH_HUMANDisease (EPP)  ---DI71K
02UniProtVAR_012028R96QHEMH_HUMANPolymorphism1041951DR96Q
03UniProtVAR_030555Q139LHEMH_HUMANDisease (EPP)  ---DQ139L
04UniProtVAR_030556S151PHEMH_HUMANDisease (EPP)  ---DS151P
05UniProtVAR_030557E178KHEMH_HUMANDisease (EPP)  ---DE178K
06UniProtVAR_030558L182RHEMH_HUMANDisease (EPP)  ---DL182R
07UniProtVAR_002384I186THEMH_HUMANDisease (EPP)  ---DI186T
08UniProtVAR_030559Y191HHEMH_HUMANDisease (EPP)  ---DY191H
09UniProtVAR_030560P192THEMH_HUMANDisease (EPP)  ---DP192T
10UniProtVAR_030561C236YHEMH_HUMANDisease (EPP)761962617DC236Y
11UniProtVAR_030562F260LHEMH_HUMANDisease (EPP)  ---DF260L
12UniProtVAR_054629S264LHEMH_HUMANDisease (EPP)  ---DS264L
13UniProtVAR_002385M267IHEMH_HUMANDisease (EPP)118204037DM267I
14UniProtVAR_030563T283IHEMH_HUMANDisease (EPP)  ---DT283I
15UniProtVAR_030564M288KHEMH_HUMANDisease (EPP)  ---DM288K
16UniProtVAR_030565P334LHEMH_HUMANDisease (EPP)150146721DP334L
17UniProtVAR_030566V362GHEMH_HUMANDisease (EPP)118204040DV362G
18UniProtVAR_030567K379NHEMH_HUMANDisease (EPP)  ---DK379N
19UniProtVAR_002386H386PHEMH_HUMANDisease (EPP)  ---DH386P
20UniProtVAR_030568C406SHEMH_HUMANDisease (EPP)  ---DC406S
21UniProtVAR_030569C406YHEMH_HUMANDisease (EPP)  ---DC406Y
22UniProtVAR_002387F417SHEMH_HUMANDisease (EPP)118204039DF417S

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (1, 4)

Asymmetric Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FERROCHELATASEPS00534 Ferrochelatase signature.HEMH_HUMAN258-276
 
 
 
  4A:258-276
B:258-276
C:258-276
D:258-276
Biological Unit 1 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FERROCHELATASEPS00534 Ferrochelatase signature.HEMH_HUMAN258-276
 
 
 
  1A:258-276
-
-
-
Biological Unit 2 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FERROCHELATASEPS00534 Ferrochelatase signature.HEMH_HUMAN258-276
 
 
 
  1-
B:258-276
-
-
Biological Unit 3 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FERROCHELATASEPS00534 Ferrochelatase signature.HEMH_HUMAN258-276
 
 
 
  1-
-
C:258-276
-
Biological Unit 4 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FERROCHELATASEPS00534 Ferrochelatase signature.HEMH_HUMAN258-276
 
 
 
  1-
-
-
D:258-276

(-) Exons   (10, 40)

Asymmetric Unit (10, 40)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1aENST000002620931aENSE00001229850chr18:55254004-55253786219HEMH_HUMAN1-23230--
1.2aENST000002620932aENSE00000669631chr18:55247431-55247305127HEMH_HUMAN23-65434A:65-65
B:65-65
C:65-65
D:65-65
1
1
1
1
1.3ENST000002620933ENSE00001229830chr18:55240597-55240478120HEMH_HUMAN65-105414A:65-105
B:65-105
C:65-105
D:65-105
41
41
41
41
1.4ENST000002620934ENSE00000669629chr18:55238772-55238624149HEMH_HUMAN105-155514A:105-155
B:105-155
C:105-155
D:105-155
51
51
51
51
1.5ENST000002620935ENSE00000669628chr18:55233813-55233679135HEMH_HUMAN155-200464A:155-200
B:155-200
C:155-200
D:155-200
46
46
46
46
1.6ENST000002620936ENSE00000669627chr18:55230212-55230106107HEMH_HUMAN200-235364A:200-235
B:200-235
C:200-235
D:200-235
36
36
36
36
1.7ENST000002620937ENSE00001229801chr18:55226475-5522637799HEMH_HUMAN236-268334A:236-268
B:236-268
C:236-268
D:236-268
33
33
33
33
1.8ENST000002620938ENSE00000669625chr18:55222184-55222077108HEMH_HUMAN269-304364A:269-304
B:269-304
C:269-304
D:269-304
36
36
36
36
1.9ENST000002620939ENSE00001229786chr18:55221656-55221492165HEMH_HUMAN305-359554A:305-359
B:305-359
C:305-359
D:305-359
55
55
55
55
1.10ENST0000026209310ENSE00000669622chr18:55218606-5521854760HEMH_HUMAN360-379204A:360-379
B:360-379
C:360-379
D:360-379
20
20
20
20
1.11bENST0000026209311bENSE00001229844chr18:55218078-552155152564HEMH_HUMAN380-423444A:380-423
B:380-423
C:380-423
D:380-423
44
44
44
44

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:359
 aligned with HEMH_HUMAN | P22830 from UniProtKB/Swiss-Prot  Length:423

    Alignment length:359
                                    74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414         
           HEMH_HUMAN    65 RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQQL 423
               SCOP domains d2qd1a_ A: Ferrochelatase                                                                                                                                                                                                                                                                                                                                               SCOP domains
               CATH domains 2qd1A01 A:65-227,A:371-423  [code=3.40.50.1400, no name defined]                                                                                                   2qd1A02 A:228-370  [code=3.40.50.1400, no name defined]                                                                                        2qd1A01 A:65-227,A:371-423                            CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeee.....hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee.....hhhhhhhhhhhh...eeeeee........hhhhhhhhhhhhhhhhh.....eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhheeeeeee..hhhhhh...hhhhhhhhhhhhhhhhh.....eeeeee...........hhhhhhhhhhh....eeeee.......hhhhhh.......hhhhhhhh..eeee......hhhhhhhhhhhhhhhhhhh...hhhhhh......hhhhhhhhhhhhh... Sec.struct. author
             SAPs(SNPs) (1) ------K------------------------Q------------------------------------------L-----------P--------------------------K---R---T----HT-------------------------------------------Y-----------------------L---L--I---------------I----K---------------------------------------------L---------------------------G----------------N------P-------------------S----------S------ SAPs(SNPs) (1)
             SAPs(SNPs) (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y----------------- SAPs(SNPs) (2)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FERROCHELATASE     --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1---------------------------------------Exon 1.4  PDB: A:105-155 UniProt: 105-155          --------------------------------------------Exon 1.6  PDB: A:200-235            Exon 1.7  PDB: A:236-268         Exon 1.8  PDB: A:269-304            Exon 1.9  PDB: A:305-359 UniProt: 305-359              Exon 1.10           Exon 1.11b  PDB: A:380-423 UniProt: 380-423  Transcript 1 (1)
           Transcript 1 (2) Exon 1.3  PDB: A:65-105 UniProt: 65-105  -------------------------------------------------Exon 1.5  PDB: A:155-200 UniProt: 155-200     ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2qd1 A  65 RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIKTLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQQL 423
                                    74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414         

Chain B from PDB  Type:PROTEIN  Length:359
 aligned with HEMH_HUMAN | P22830 from UniProtKB/Swiss-Prot  Length:423

    Alignment length:359
                                    74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414         
           HEMH_HUMAN    65 RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQQL 423
               SCOP domains d2qd1b_ B: Ferrochelatase                                                                                                                                                                                                                                                                                                                                               SCOP domains
               CATH domains 2qd1B01 B:65-227,B:371-423  [code=3.40.50.1400, no name defined]                                                                                                   2qd1B02 B:228-370  [code=3.40.50.1400, no name defined]                                                                                        2qd1B01 B:65-227,B:371-423                            CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeee.....hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee.....hhhhhhhhhhhh...eeeeee........hhhhhhhhhhhhhhhhh.....eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhheeeeeee..hhhhhh...hhhhhhhhhhhhhhhhh.....eeeeee...........hhhhhhhhhhhh...eeeee.......hhhhhh.......hhhhhhhh..eeee......hhhhhhhhhhhhhhhhhhh...hhhhhh.......hhhhhhhhhhhh... Sec.struct. author
             SAPs(SNPs) (1) ------K------------------------Q------------------------------------------L-----------P--------------------------K---R---T----HT-------------------------------------------Y-----------------------L---L--I---------------I----K---------------------------------------------L---------------------------G----------------N------P-------------------S----------S------ SAPs(SNPs) (1)
             SAPs(SNPs) (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y----------------- SAPs(SNPs) (2)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FERROCHELATASE     --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1---------------------------------------Exon 1.4  PDB: B:105-155 UniProt: 105-155          --------------------------------------------Exon 1.6  PDB: B:200-235            Exon 1.7  PDB: B:236-268         Exon 1.8  PDB: B:269-304            Exon 1.9  PDB: B:305-359 UniProt: 305-359              Exon 1.10           Exon 1.11b  PDB: B:380-423 UniProt: 380-423  Transcript 1 (1)
           Transcript 1 (2) Exon 1.3  PDB: B:65-105 UniProt: 65-105  -------------------------------------------------Exon 1.5  PDB: B:155-200 UniProt: 155-200     ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2qd1 B  65 RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIKTLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQQL 423
                                    74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414         

Chain C from PDB  Type:PROTEIN  Length:359
 aligned with HEMH_HUMAN | P22830 from UniProtKB/Swiss-Prot  Length:423

    Alignment length:359
                                    74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414         
           HEMH_HUMAN    65 RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQQL 423
               SCOP domains d2qd1c_ C: Ferrochelatase                                                                                                                                                                                                                                                                                                                                               SCOP domains
               CATH domains 2qd1C01 C:65-227,C:371-423  [code=3.40.50.1400, no name defined]                                                                                                   2qd1C02 C:228-370  [code=3.40.50.1400, no name defined]                                                                                        2qd1C01 C:65-227,C:371-423                            CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeee.....hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee.....hhhhhhhhhhhh...eeeeee........hhhhhhhhhhhhhhhhh.....eeeee.....hhhhhhhhhhhhhhhhhh....hhhhheeeeeee..hhhhhh...hhhhhhhhhhhhhhhhh.....eeeeee...........hhhhhhhhhhhh...eeeee.......hhhhhh.......hhhhhhh...eeee......hhhhhhhhhhhhhhhhhhh....hhhhh.......hhhhhhhhhhhh... Sec.struct. author
             SAPs(SNPs) (1) ------K------------------------Q------------------------------------------L-----------P--------------------------K---R---T----HT-------------------------------------------Y-----------------------L---L--I---------------I----K---------------------------------------------L---------------------------G----------------N------P-------------------S----------S------ SAPs(SNPs) (1)
             SAPs(SNPs) (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y----------------- SAPs(SNPs) (2)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FERROCHELATASE     --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1---------------------------------------Exon 1.4  PDB: C:105-155 UniProt: 105-155          --------------------------------------------Exon 1.6  PDB: C:200-235            Exon 1.7  PDB: C:236-268         Exon 1.8  PDB: C:269-304            Exon 1.9  PDB: C:305-359 UniProt: 305-359              Exon 1.10           Exon 1.11b  PDB: C:380-423 UniProt: 380-423  Transcript 1 (1)
           Transcript 1 (2) Exon 1.3  PDB: C:65-105 UniProt: 65-105  -------------------------------------------------Exon 1.5  PDB: C:155-200 UniProt: 155-200     ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2qd1 C  65 RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIKTLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQQL 423
                                    74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414         

Chain D from PDB  Type:PROTEIN  Length:359
 aligned with HEMH_HUMAN | P22830 from UniProtKB/Swiss-Prot  Length:423

    Alignment length:359
                                    74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414         
           HEMH_HUMAN    65 RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQQL 423
               SCOP domains d2qd1d_ D: Ferrochelatase                                                                                                                                                                                                                                                                                                                                               SCOP domains
               CATH domains 2qd1D01 D:65-227,D:371-423  [code=3.40.50.1400, no name defined]                                                                                                   2qd1D02 D:228-370  [code=3.40.50.1400, no name defined]                                                                                        2qd1D01 D:65-227,D:371-423                            CATH domains
           Pfam domains (1) ---Ferrochelatase-2qd1D01 D:68-389                                                                                                                                                                                                                                                                                                   ---------------------------------- Pfam domains (1)
           Pfam domains (2) ---Ferrochelatase-2qd1D02 D:68-389                                                                                                                                                                                                                                                                                                   ---------------------------------- Pfam domains (2)
           Pfam domains (3) ---Ferrochelatase-2qd1D03 D:68-389                                                                                                                                                                                                                                                                                                   ---------------------------------- Pfam domains (3)
           Pfam domains (4) ---Ferrochelatase-2qd1D04 D:68-389                                                                                                                                                                                                                                                                                                   ---------------------------------- Pfam domains (4)
         Sec.struct. author ....eeeeeee.....hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee.....hhhhhhhhhhhh...eeeeee........hhhhhhhhhhhhhhhhh.....eeeee.....hhhhhhhhhhhhhhhhhh....hhhhheeeeeee..hhhhhh...hhhhhhhhhhhhhhhhh.....eeeeee...........hhhhhhhhhhhh...eeeee.......hhhhhh.......hhhhhhhh..eeee......hhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhh.... Sec.struct. author
             SAPs(SNPs) (1) ------K------------------------Q------------------------------------------L-----------P--------------------------K---R---T----HT-------------------------------------------Y-----------------------L---L--I---------------I----K---------------------------------------------L---------------------------G----------------N------P-------------------S----------S------ SAPs(SNPs) (1)
             SAPs(SNPs) (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y----------------- SAPs(SNPs) (2)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FERROCHELATASE     --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1---------------------------------------Exon 1.4  PDB: D:105-155 UniProt: 105-155          --------------------------------------------Exon 1.6  PDB: D:200-235            Exon 1.7  PDB: D:236-268         Exon 1.8  PDB: D:269-304            Exon 1.9  PDB: D:305-359 UniProt: 305-359              Exon 1.10           Exon 1.11b  PDB: D:380-423 UniProt: 380-423  Transcript 1 (1)
           Transcript 1 (2) Exon 1.3  PDB: D:65-105 UniProt: 65-105  -------------------------------------------------Exon 1.5  PDB: D:155-200 UniProt: 155-200     ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2qd1 D  65 RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIKTLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQQL 423
                                    74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414         

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric Unit

(-) CATH Domains  (1, 8)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
1a2qd1A02A:228-370
1b2qd1B02B:228-370
1c2qd1C02C:228-370
1d2qd1D02D:228-370
1e2qd1A01A:65-227,A:371-423
1f2qd1B01B:65-227,B:371-423
1g2qd1C01C:65-227,C:371-423
1h2qd1D01D:65-227,D:371-423

(-) Pfam Domains  (1, 4)

Asymmetric Unit

(-) Gene Ontology  (25, 25)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (HEMH_HUMAN | P22830)
molecular function
    GO:0051537    2 iron, 2 sulfur cluster binding    Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.
    GO:0004325    ferrochelatase activity    Catalysis of the reaction: protoheme = Fe(2+) + protoporphyrin IX.
    GO:0008198    ferrous iron binding    Interacting selectively and non-covalently with ferrous iron, Fe(II).
    GO:0051536    iron-sulfur cluster binding    Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0071549    cellular response to dexamethasone stimulus    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dexamethasone stimulus.
    GO:0006091    generation of precursor metabolites and energy    The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances.
    GO:0006783    heme biosynthetic process    The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors.
    GO:0006779    porphyrin-containing compound biosynthetic process    The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.
    GO:0046501    protoporphyrinogen IX metabolic process    The chemical reactions and pathways involving protoporphyrinogen IX, the specific substrate for the enzyme ferrochelatase, which catalyzes the insertion of iron to form protoheme. It is probably also the substrate for chlorophyll formation.
    GO:0046685    response to arsenic-containing substance    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.
    GO:0042493    response to drug    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease.
    GO:0045471    response to ethanol    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus.
    GO:0017085    response to insecticide    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insecticide stimulus. Insecticides are chemicals used to kill insects.
    GO:0010288    response to lead ion    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lead ion stimulus.
    GO:0009416    response to light stimulus    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.
    GO:0010038    response to metal ion    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus.
    GO:0051597    response to methylmercury    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylmercury stimulus.
    GO:0070541    response to platinum ion    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platinum stimulus.
cellular component
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005743    mitochondrial inner membrane    The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
    GO:0005759    mitochondrial matrix    The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    CHD  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    FES  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    IMD  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    PP9  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Gly A:312 - Pro A:313   [ RasMol ]  
    Gly B:312 - Pro B:313   [ RasMol ]  
    Gly C:312 - Pro C:313   [ RasMol ]  
    Gly D:312 - Pro D:313   [ RasMol ]  
    His A:167 - Pro A:168   [ RasMol ]  
    His B:167 - Pro B:168   [ RasMol ]  
    His C:167 - Pro C:168   [ RasMol ]  
    His D:167 - Pro D:168   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]
    Biological Unit 3  [ Jena3D ]
    Biological Unit 4  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  2qd1
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  HEMH_HUMAN | P22830
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  4.99.1.1
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  177000
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  HEMH_HUMAN | P22830
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HEMH_HUMAN | P228301hrk 2hrc 2hre 2pnj 2po5 2po7 2qd2 2qd3 2qd4 2qd5 3aqi 3hcn 3hco 3hcp 3hcr 3w1w 4f4d 4kla 4klc 4klr 4kmm 4mk4

(-) Related Entries Specified in the PDB File

2qd3 2qd4 2qd5