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(-) Description

Title :  SALL-Y70T WITH SAM AND CL
 
Authors :  J. P. Noel, F. Pojer
Date :  05 Jun 07  (Deposition) - 11 Dec 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (3x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  B  (3x)
Keywords :  Chlorinase, Y70T Mutant Sam And Cl Complex, Biosynthetic Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. S. Eustaquio, F. Pojer, J. P. Noel, B. S. Moore
Discovery And Characterization Of A Marine Bacterial Sam-Dependent Chlorinase
Nat. Chem. Biol. V. 4 69 2008
PubMed-ID: 18059261  |  Reference-DOI: 10.1038/NCHEMBIO.2007.56

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Plasmid: PHIS8
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: SALL
    Mutation: YES
    Organism Scientific: SALINISPORA TROPICA
    Organism Taxid: 369723
    Strain: CNB-440

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (3x): A 
Biological Unit 2 (1x):  B
Biological Unit 3 (3x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 4)

Asymmetric Unit (2, 4)
No.NameCountTypeFull Name
1CL2Ligand/IonCHLORIDE ION
2SAM2Ligand/IonS-ADENOSYLMETHIONINE
Biological Unit 1 (1, 3)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2SAM3Ligand/IonS-ADENOSYLMETHIONINE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2SAM1Ligand/IonS-ADENOSYLMETHIONINE
Biological Unit 3 (1, 3)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2SAM3Ligand/IonS-ADENOSYLMETHIONINE

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR A:75 , TRP A:129 , TYR A:130 , GLY A:131 , SAM A:500BINDING SITE FOR RESIDUE CL A 284
2AC2SOFTWARETHR B:75 , TRP B:129 , TYR B:130 , GLY B:131 , SAM B:500BINDING SITE FOR RESIDUE CL B 284
3AC3SOFTWAREASP A:11 , VAL A:12 , ALA A:18 , PHE A:45 , VAL A:71 , TYR A:72 , PRO A:73 , THR A:128 , TRP A:129 , ASP A:183 , PHE A:186 , ASN A:188 , TRP A:190 , PHE A:228 , SER A:242 , LEU A:250 , ASN A:251 , GLN A:252 , CL A:284BINDING SITE FOR RESIDUE SAM A 500
4AC4SOFTWAREASP B:11 , PHE B:45 , TYR B:72 , PRO B:73 , THR B:128 , TRP B:129 , ASP B:183 , PHE B:186 , ASN B:188 , TRP B:190 , PHE B:228 , SER B:242 , LEU B:250 , ASN B:251 , GLN B:252 , CL B:284 , HOH B:541BINDING SITE FOR RESIDUE SAM B 500

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2Q6O)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Gln A:123 -Pro A:124
2Gln B:123 -Pro B:124

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2Q6O)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2Q6O)

(-) Exons   (0, 0)

(no "Exon" information available for 2Q6O)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:269
 aligned with SALL_SALTO | A4X3Q0 from UniProtKB/Swiss-Prot  Length:283

    Alignment length:269
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262         
           SALL_SALTO     3 HNLIAFLSDVGSADEAHALCKGVMYGVAPAATIVDITHDVAPFDVREGALFLADVPHSFPAHTVICAYVYPETGTATHTIAVRNEKGQLLVGPNNGLLSFALDASPAVECHEVLSPDVMNQPVTPTWYGKDIVAACAAHLAAGTDLAAVGPRIDPKQIVRLPYASASEVEGGIRGEVVRIDRAFGNVWTNIPTHLIGSMLQDGERLEVKIEALSDTVLELPFCKTFGEVDEGQPLLYLNSRGRLALGLNQSNFIEKWPVVPGDSITVSP 271
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee......hhhhhhhhhhhhhh...eeee........hhhhhhhhhhhhhhhh...eeeeee..........eeeeee....eeeee....hhhhhhhh.eeeeee..hhhhh.......hhhhhhhhhhhhhhhh..hhhhhh...hhhhh........ee....eeeeeeee......eeeeee.hhhh........eeeee......eeee.ee.hhhhh....eeeee....eeeeee...hhhhhh......eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2q6o A   3 HNLIAFLSDVGSADEAHALCKGVMYGVAPAATIVDITHDVAPFDVREGALFLADVPHSFPAHTVICATVYPETGTATHTIAVRNEKGQLLVGPNNGLLSFALDASPAVECHEVLSPDVMNQPVTPTWYGKDIVAACAAHLAAGTDLAAVGPRIDPKQIVRLPYASASEVEGGIRGEVVRIDRAFGNVWTNIPTHLIGSMLQDGERLEVKIEALSDTVLELPFCKTFGEVDEGQPLLYLNSRGRLALGLNQSNFIEKWPVVPGDSITVSP 271
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262         


Chain B from PDB  Type:PROTEIN  Length:269
 aligned with SALL_SALTO | A4X3Q0 from UniProtKB/Swiss-Prot  Length:283

    Alignment length:269
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262         
           SALL_SALTO     3 HNLIAFLSDVGSADEAHALCKGVMYGVAPAATIVDITHDVAPFDVREGALFLADVPHSFPAHTVICAYVYPETGTATHTIAVRNEKGQLLVGPNNGLLSFALDASPAVECHEVLSPDVMNQPVTPTWYGKDIVAACAAHLAAGTDLAAVGPRIDPKQIVRLPYASASEVEGGIRGEVVRIDRAFGNVWTNIPTHLIGSMLQDGERLEVKIEALSDTVLELPFCKTFGEVDEGQPLLYLNSRGRLALGLNQSNFIEKWPVVPGDSITVSP 271
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee......hhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhhhhh...eeeeee..........eeeeee....eeeee......hhhhhh.eeeeee..hhhhh.......hhhhhhhhhhhhhhhh..hhhhhh...hhhhh........ee....eeeeeeee......eeeeee...hhhhhh....eeeee......eeee....hhhhh....eeeee....eeeeee...hhhhhh......eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2q6o B   3 HNLIAFLSDVGSADEAHALCKGVMYGVAPAATIVDITHDVAPFDVREGALFLADVPHSFPAHTVICATVYPETGTATHTIAVRNEKGQLLVGPNNGLLSFALDASPAVECHEVLSPDVMNQPVTPTWYGKDIVAACAAHLAAGTDLAAVGPRIDPKQIVRLPYASASEVEGGIRGEVVRIDRAFGNVWTNIPTHLIGSMLQDGERLEVKIEALSDTVLELPFCKTFGEVDEGQPLLYLNSRGRLALGLNQSNFIEKWPVVPGDSITVSP 271
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2Q6O)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2Q6O)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2Q6O)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (SALL_SALTO | A4X3Q0)
molecular function
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0016765    transferase activity, transferring alkyl or aryl (other than methyl) groups    Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor).

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  2q6o
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SALL_SALTO | A4X3Q0: 2q6i 2q6k 2q6l

(-) Related Entries Specified in the PDB File

2q6i SALL WITH CLDA AND L_MET
2q6k SALL WITH ADENOSINE
2q6l SALL Y70T/G131S WITH CLDA AND L-MET