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(-) Description

Title :  SALL WITH ADENOSINE
 
Authors :  F. Pojer, J. P. Noel
Date :  05 Jun 07  (Deposition) - 11 Dec 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.55
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (3x)
Biol. Unit 2:  A  (6x)
Keywords :  Chlorinase, Complex With Adenosine, Biosynthetic Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. S. Eustaquio, F. Pojer, J. P. Noel, B. S. Moore
Discovery And Characterization Of A Marine Bacterial Sam-Dependent Chlorinase
Nat. Chem. Biol. V. 4 69 2008
PubMed-ID: 18059261  |  Reference-DOI: 10.1038/NCHEMBIO.2007.56

(-) Compounds

Molecule 1 - CHLORINASE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Plasmid: PHIS8
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Organism Scientific: SALINISPORA TROPICA
    Organism Taxid: 369723
    Strain: CNB-440

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (3x): A
Biological Unit 2 (6x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric Unit (2, 3)
No.NameCountTypeFull Name
1ADN1Ligand/IonADENOSINE
2PEG2Ligand/IonDI(HYDROXYETHYL)ETHER
Biological Unit 1 (2, 9)
No.NameCountTypeFull Name
1ADN3Ligand/IonADENOSINE
2PEG6Ligand/IonDI(HYDROXYETHYL)ETHER
Biological Unit 2 (2, 18)
No.NameCountTypeFull Name
1ADN6Ligand/IonADENOSINE
2PEG12Ligand/IonDI(HYDROXYETHYL)ETHER

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:11 , PHE A:45 , TYR A:70 , TYR A:72 , PRO A:73 , THR A:75 , THR A:128 , TRP A:129 , TYR A:130 , GLY A:131 , PHE A:186 , ASN A:188 , PHE A:228 , LEU A:250 , GLN A:252BINDING SITE FOR RESIDUE ADN A 699
2AC2SOFTWAREGLN A:2 , ASN A:4 , TYR A:27 , PRO A:31 , HIS A:64 , HOH A:876BINDING SITE FOR RESIDUE PEG A 401
3AC3SOFTWAREASP A:16 , GLU A:17 , ALA A:18 , LEU A:21 , ASP A:56 , TRP A:129 , ARG A:181 , ASP A:183 , TRP A:190 , SER A:242 , HOH A:778BINDING SITE FOR RESIDUE PEG A 402

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2Q6K)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Gln A:123 -Pro A:124

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2Q6K)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2Q6K)

(-) Exons   (0, 0)

(no "Exon" information available for 2Q6K)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:257
 aligned with SALL_SALTO | A4X3Q0 from UniProtKB/Swiss-Prot  Length:283

    Alignment length:271
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270 
           SALL_SALTO     1 MQHNLIAFLSDVGSADEAHALCKGVMYGVAPAATIVDITHDVAPFDVREGALFLADVPHSFPAHTVICAYVYPETGTATHTIAVRNEKGQLLVGPNNGLLSFALDASPAVECHEVLSPDVMNQPVTPTWYGKDIVAACAAHLAAGTDLAAVGPRIDPKQIVRLPYASASEVEGGIRGEVVRIDRAFGNVWTNIPTHLIGSMLQDGERLEVKIEALSDTVLELPFCKTFGEVDEGQPLLYLNSRGRLALGLNQSNFIEKWPVVPGDSITVSP 271
               SCOP domains d2q6ka1 A:1-163 automated matches                                                                                                                                  ------     --d2q6ka2 A:177-271 autom       ated m  atches                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee......hhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhhhhh...eeeeee..........eeeeee....eeeee....hhhhhhhh.eeeeee..hhhhh.......hhhhhhhhhhhhhhhhh.hhhhhh.eehhhhh.........-----.eeeeeee......eeeeeehhhhh-------.eeeee--...eeeee....hhhhh....eeeee....eeeeee...hhhhhh......eeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2q6k A   1 MQHNLIAFLSDVGSADEAHALCKGVMYGVAPAATIVDITHDVAPFDVREGALFLADVPHSFPAHTVICAYVYPETGTATHTIAVRNEKGQLLVGPNNGLLSFALDASPAVECHEVLSPDVMNQPVTPTWYGKDIVAACAAHLAAGTDLAAVGPRIDPKQIVRLPYASAS-----IRGEVVRIDRAFGNVWTNIPTHLIG-------RLEVKI--LSDTVLELPFCKTFGEVDEGQPLLYLNSRGRLALGLNQSNFIEKWPVVPGDSITVSP 271
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160        |-    |  180       190        |-      |210 |  |  220       230       240       250       260       270 
                                                                                                                                                                                                  169   175                     199     207  212  |                                                        
                                                                                                                                                                                                                                                215
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 2)

Asymmetric Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2Q6K)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2Q6K)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain A   (SALL_SALTO | A4X3Q0)
molecular function
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0016765    transferase activity, transferring alkyl or aryl (other than methyl) groups    Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor).

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SALL_SALTO | A4X3Q0: 2q6i 2q6l 2q6o

(-) Related Entries Specified in the PDB File

2q6i THE SAME PROTEIN COMPLEXED WITH CLDA AND L-MET
2q6l SALL DOUBLE MUTANT Y70T G131S WITH CLDA AND L-MET
2q6o SALL SINGLE MUTANT Y70T WITH SAM AND CL