2OS7 - JenaLib

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Asym.Unit - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CAF1M PERIPLASMIC CHAPERONE TETRAMER

Authors :   S. D. Knight, A. Z. Zavialov

Date :   05 Feb 07 (Deposition) - 17 Apr 07 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.90

Chains :   Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B  (2x)
Biol. Unit 2: C,D,E,F  (1x)

Keywords :   Immunoglobulin Fold, Hetero Beta Barrel, Chaperone (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. Z. Zavialov, S. D. Knight
A Novel Self-Capping Mechanism Controls Aggregation Of Periplasmic Chaperone Caf1M
Mol. Microbiol. V. 64 153 2007
PubMed-ID: 17376079 | Reference-DOI: 10.1111/J.1365-2958.2007.05644.X

Molecule 1 - CHAPERONE PROTEIN CAF1M
	Chains	:	A, B, C, D, E, F
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PTCA1
	Expression System Strain	:	B834 (DE3)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	CAF1M
	Organism Scientific	:	YERSINIA PESTIS
	Organism Taxid	:	632
	Synonym	:	CAPSULE PROTEIN FRACTION 1

		1	2	3	4	5	6
Asymmetric Unit	:	A	B	C	D	E	F
Biological Unit 1 (2x)	:	A	B
Biological Unit 2 (1x)	:			C	D	E	F

Summary Information (see also Sequences/Alignments below)

(no "Ligand,Modified Residues,Ions" information available for 2OS7)

(no "Site" information available for 2OS7)

Asymmetric Unit

No.	Residues
1	A:98	-	A:137
2	B:98	-	B:137
3	C:98	-	C:137
4	D:98	-	D:137
5	E:98	-	E:137
6	F:98	-	F:137

Asymmetric Unit

No.	Residues
1	Thr A:64	-	Pro A:65
2	Thr B:64	-	Pro B:65
3	Thr C:64	-	Pro C:65
4	Thr D:64	-	Pro D:65
5	Thr E:64	-	Pro E:65
6	Thr F:64	-	Pro F:65

(no "SAP(SNP)/Variant" information available for 2OS7)

Asymmetric Unit (1, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PILI_CHAPERONE	PS00635	Gram-negative pili assembly chaperone signature.	CAF1M_YERPE	110-127	6	A:87-104 B:87-103 C:87-103 D:87-103 E:87-103 F:88-103

Biological Unit 1 (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PILI_CHAPERONE	PS00635	Gram-negative pili assembly chaperone signature.	CAF1M_YERPE	110-127	4	A:87-104 B:87-103 - - - -

Biological Unit 2 (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PILI_CHAPERONE	PS00635	Gram-negative pili assembly chaperone signature.	CAF1M_YERPE	110-127	4	- - C:87-103 D:87-103 E:87-103 F:88-103

(no "Exon" information available for 2OS7)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:206
 aligned with CAF1M_YERPE | P26926 from UniProtKB/Swiss-Prot  Length:258

    Alignment length:231
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255 
          CAF1M_YERPE    26 PDIKFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQQNSLRIAQAGGVFPRDKESLKWLCVKGIPPKDEDIWVDDATNKQKFNPDKDVGVFVQFAINNCIKLLVRPNELKGTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDLPKGLAGARNVSWRIINDQGGLDRLYSKNV 256
               SCOP domains d2os7a1 A:3-147 Chaperone protein Caf1m                                                                                                          d2os7a2 A:148-233 Caf1m                                                                SCOP domains
               CATH domains -----------2os7A01 A:14-145 PapD-like                                                                                                          ---2os7A02 A:149-232  [code=2.60.40.1070, no name defined]                             - CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhheee...eeeee.....eeeeee......eeeeeeee...........ee....eeee....eeeeeeee..........eeeeeeeeee...--------------------..eeeeee.eeeeeeeee......hhhhhhhhheeeee..eeeeee.....eeeeeeee..ee....ee...eeeeee....-----.eeeee..........eee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------PILI_CHAPERONE    --------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2os7 A   3 PDIKFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQQNSLRIAQAGGVFPRDKESLKWLCVKGIPPK--------------------VGVFVQFAINNCIKLLVRPNELKGTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDLPKG-----NVSWRIINDQGGLDRLYSKNV 233
                                    12        22        32        42        52        62        72        82        92       102  |      -         -   |   132       142       152       162       172       182       192       202    |    -|      222       232 
                                                                                                                                105                  126                                                                              207   213

Chain B from PDB  Type:PROTEIN  Length:196
 aligned with CAF1M_YERPE | P26926 from UniProtKB/Swiss-Prot  Length:258

    Alignment length:228
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248        
          CAF1M_YERPE    29 KFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQQNSLRIAQAGGVFPRDKESLKWLCVKGIPPKDEDIWVDDATNKQKFNPDKDVGVFVQFAINNCIKLLVRPNELKGTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDLPKGLAGARNVSWRIINDQGGLDRLYSKNV 256
               SCOP domains d2os7b1 B:6-147 Chaperone protein Caf1m                                                                                                       d2os7b2 B:148-233 Caf1m                                                                SCOP domains
               CATH domains --------2os7B01 B:14-145 PapD-like                                                                                                          ---2os7B02 B:149-232  [code=2.60.40.1070, no name defined]                             - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee..ee...eeeeee....eeeeeee.....eeeeeee.----------.eeee..eeee....eeeeeeee..........eeeeeeeeee.--------------................eeeeeeeeeee.....hhhhhhhhheeee....eeeee.......eeeeee..ee.........eeeee..--------.eeeee..........eee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------PILI_CHAPERONE    --------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2os7 B   6 KFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIY----------PFVVTPPLFRLDAKQQNSLRIAQAGGVFPRDKESLKWLCVKGIP--------------QKFNPDKDVGVFVQFAINNCIKLLVRPNELKGTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDL--------NVSWRIINDQGGLDRLYSKNV 233
                                    15        25        35        45   |     -    |   65        75        85        95       | -         -  |    125       135       145       155       165       175       185       195        |-       215       225        
                                                                      49         60                                        103            118                                                                                   204      213

Chain C from PDB  Type:PROTEIN  Length:205
 aligned with CAF1M_YERPE | P26926 from UniProtKB/Swiss-Prot  Length:258

    Alignment length:231
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255 
          CAF1M_YERPE    26 PDIKFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQQNSLRIAQAGGVFPRDKESLKWLCVKGIPPKDEDIWVDDATNKQKFNPDKDVGVFVQFAINNCIKLLVRPNELKGTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDLPKGLAGARNVSWRIINDQGGLDRLYSKNV 256
               SCOP domains d2os7c1 C:3-147 Chaperone protein Caf1m                                                                                                          d2os7c2 C:148-233 Caf1m                                                                SCOP domains
               CATH domains -----------2os7C01 C:14-145 PapD-like                                                                                                          ---2os7C02 C:149-232  [code=2.60.40.1070, no name defined]                             - CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhh.eee...eeeee.....eeeeee......eeeeeeee...........eeee..eeee....eeeeeeee..........eeeeeeeeee.----------------------.eeeeeeeeeeeeeeeee......hhhhhhhhheeeee..eeeeee.....eeeeeeee..ee....ee...eeeeee..----...eeeeee..........eeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------PILI_CHAPERONE    --------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2os7 C   3 PDIKFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQQNSLRIAQAGGVFPRDKESLKWLCVKGIP----------------------VGVFVQFAINNCIKLLVRPNELKGTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDLP----GARNVSWRIINDQGGLDRLYSKNV 233
                                    12        22        32        42        52        62        72        82        92       102|        -         -   |   132       142       152       162       172       182       192       202  |    212       222       232 
                                                                                                                              103                    126                                                                            205  210

Chain D from PDB  Type:PROTEIN  Length:195
 aligned with CAF1M_YERPE | P26926 from UniProtKB/Swiss-Prot  Length:258

    Alignment length:227
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       
          CAF1M_YERPE    29 KFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQQNSLRIAQAGGVFPRDKESLKWLCVKGIPPKDEDIWVDDATNKQKFNPDKDVGVFVQFAINNCIKLLVRPNELKGTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDLPKGLAGARNVSWRIINDQGGLDRLYSKN 255
               SCOP domains d2os7d1 D:6-147 Chaperone protein Caf1m                                                                                                       d2os7d2 D:148-232 Caf1m                                                               SCOP domains
               CATH domains --------2os7D01 D:14-145 PapD-like                                                                                                          ---2os7D02 D:149-232  [code=2.60.40.1070, no name defined]                              CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..ee...eeee......eeeeeee.....eeeeeeee----------.eeee..eeee....eeeeeeee..........eeeeeeeeee.--------------.........eeeeeeeeeeeeeeee.......hhhhhhhhheeee...eeeeee.......eeeeee..ee.........eeeeee.--------.eeeee..........eee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------PILI_CHAPERONE    -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2os7 D   6 KFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIY----------PFVVTPPLFRLDAKQQNSLRIAQAGGVFPRDKESLKWLCVKGIP--------------QKFNPDKDVGVFVQFAINNCIKLLVRPNELKGTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDL--------NVSWRIINDQGGLDRLYSKN 232
                                    15        25        35        45   |     -    |   65        75        85        95       | -         -  |    125       135       145       155       165       175       185       195        |-       215       225       
                                                                      49         60                                        103            118                                                                                   204      213

Chain E from PDB  Type:PROTEIN  Length:202
 aligned with CAF1M_YERPE | P26926 from UniProtKB/Swiss-Prot  Length:258

    Alignment length:230
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255
          CAF1M_YERPE    26 PDIKFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQQNSLRIAQAGGVFPRDKESLKWLCVKGIPPKDEDIWVDDATNKQKFNPDKDVGVFVQFAINNCIKLLVRPNELKGTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDLPKGLAGARNVSWRIINDQGGLDRLYSKN 255
               SCOP domains d2os7e1 E:3-147 Chaperone protein Caf1m                                                                                                          d2os7e2 E:148-232 Caf1m                                                               SCOP domains
               CATH domains -----------2os7E01 E:14-145 PapD-like                                                                                                          ---2os7E02 E:149-232  [code=2.60.40.1070, no name defined]                              CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeehhhh.eee...eeeee.....eeeeee......eeeeeeee...........eeee..eeee....eeeeeeee..........eeeeeeeeee.----------------------.eeeeeeeeeeeeeeeee......hhhhhhhhheeeee..eeeeee.....eeeeeeee..ee....ee...eeeee...------..eeeee..........eee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------PILI_CHAPERONE    -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2os7 E   3 PDIKFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQQNSLRIAQAGGVFPRDKESLKWLCVKGIP----------------------VGVFVQFAINNCIKLLVRPNELKGTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDLP------RNVSWRIINDQGGLDRLYSKN 232
                                    12        22        32        42        52        62        72        82        92       102|        -         -   |   132       142       152       162       172       182       192       202  |    212       222       232
                                                                                                                              103                    126                                                                            205    212

Chain F from PDB  Type:PROTEIN  Length:190
 aligned with CAF1M_YERPE | P26926 from UniProtKB/Swiss-Prot  Length:258

    Alignment length:228
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248        
          CAF1M_YERPE    29 KFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQQNSLRIAQAGGVFPRDKESLKWLCVKGIPPKDEDIWVDDATNKQKFNPDKDVGVFVQFAINNCIKLLVRPNELKGTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDLPKGLAGARNVSWRIINDQGGLDRLYSKNV 256
               SCOP domains d2os7f1 F:6-147 Chaperone protein Caf1m                                                                                                       d2os7f2 F:148-233 Caf1m                                                                SCOP domains
               CATH domains --------2os7F01 F:14-145 PapD-like                                                                                                          ---2os7F02 F:149-232  [code=2.60.40.1070, no name defined]                             - CATH domains
           Pfam domains (1) -------Pili_assembly_N-2os7F01 F:13-148                                                                                                        ------------------Pili_assembly_C-2os7F07 F:167-230                               --- Pfam domains (1)
           Pfam domains (2) -------Pili_assembly_N-2os7F02 F:13-148                                                                                                        ------------------Pili_assembly_C-2os7F08 F:167-230                               --- Pfam domains (2)
           Pfam domains (3) -------Pili_assembly_N-2os7F03 F:13-148                                                                                                        ------------------Pili_assembly_C-2os7F09 F:167-230                               --- Pfam domains (3)
           Pfam domains (4) -------Pili_assembly_N-2os7F04 F:13-148                                                                                                        ------------------Pili_assembly_C-2os7F10 F:167-230                               --- Pfam domains (4)
           Pfam domains (5) -------Pili_assembly_N-2os7F05 F:13-148                                                                                                        ------------------Pili_assembly_C-2os7F11 F:167-230                               --- Pfam domains (5)
           Pfam domains (6) -------Pili_assembly_N-2os7F06 F:13-148                                                                                                        ------------------Pili_assembly_C-2os7F12 F:167-230                               --- Pfam domains (6)
         Sec.struct. author .eeeeee..ee...eeeee.....eeeeeee.....eeeeeeee----------..eee..eeee....eeeeeee------.....eeeeeeeeee.--------------.........eeeeeeeeeeeeeeeee......hhhhhhhhheeeee..eeeeee.....eeeeeeee..ee....ee...eeeee..--------.eeeee..........eee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------PILI_CHAPERONE    --------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2os7 F   6 KFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIY----------PFVVTPPLFRLDAKQQNSLRIA------PRDKESLKWLCVKGIP--------------QKFNPDKDVGVFVQFAINNCIKLLVRPNELKGTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDL--------NVSWRIINDQGGLDRLYSKNV 233
                                    15        25        35        45   |     -    |   65        75     |   -  |     95       | -         -  |    125       135       145       155       165       175       185       195        |-       215       225        
                                                                      49         60                   81     88            103            118                                                                                   204      213

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: C2 domain-like (198)

Superfamily: Periplasmic chaperone C-domain (38)

Family: Periplasmic chaperone C-domain (33)

Protein domain: Caf1m (8)

Yersinia pestis [TaxId: 632] (8)

1a	d2os7a2	A:148-233
1b	d2os7b2	B:148-233
1c	d2os7c2	C:148-233
1d	d2os7d2	D:148-232
1e	d2os7e2	E:148-232
1f	d2os7f2	F:148-233

Fold: Immunoglobulin-like beta-sandwich (7299)

Superfamily: PapD-like (47)

Family: Pilus chaperone (36)

Protein domain: Chaperone protein Caf1m (8)

Yersinia pestis [TaxId: 632] (8)

2a	d2os7a1	A:3-147
2b	d2os7b1	B:6-147
2c	d2os7c1	C:3-147
2d	d2os7d1	D:6-147
2e	d2os7e1	E:3-147
2f	d2os7f1	F:6-147

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Beta (13760)

Architecture: Sandwich (5577)

Topology: Immunoglobulin-like (3897)

Homologous Superfamily: [code=2.60.40.1070, no name defined] (29)

Yersinia pestis. Organism_taxid: 632. (5)

1a	2os7C02	C:149-232
1b	2os7D02	D:149-232
1c	2os7F02	F:149-232
1d	2os7A02	A:149-232
1e	2os7E02	E:149-232
1f	2os7B02	B:149-232

Homologous Superfamily: PapD-like (38)

Yersinia pestis. Organism_taxid: 632. (5)

2a	2os7A01	A:14-145
2b	2os7D01	D:14-145
2c	2os7F01	F:14-145
2d	2os7C01	C:14-145
2e	2os7E01	E:14-145
2f	2os7B01	B:14-145

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: E-set (290)

Family: Pili_assembly_N (20)

Yersinia pestis (4)

1a	Pili_assembly_N-2os7F01	F:13-148
1b	Pili_assembly_N-2os7F02	F:13-148
1c	Pili_assembly_N-2os7F03	F:13-148
1d	Pili_assembly_N-2os7F04	F:13-148
1e	Pili_assembly_N-2os7F05	F:13-148
1f	Pili_assembly_N-2os7F06	F:13-148

Clan: no clan defined [family: Pili_assembly_C] (20)

Family: Pili_assembly_C (20)

Yersinia pestis (4)

2a	Pili_assembly_C-2os7F07	F:167-230
2b	Pili_assembly_C-2os7F08	F:167-230
2c	Pili_assembly_C-2os7F09	F:167-230
2d	Pili_assembly_C-2os7F10	F:167-230
2e	Pili_assembly_C-2os7F11	F:167-230
2f	Pili_assembly_C-2os7F12	F:167-230

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F (CAF1M_YERPE | P26926)

molecular function
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0071555	cell wall organization	A process that results in the assembly, arrangement of constituent parts, or disassembly of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.
	GO:0061077	chaperone-mediated protein folding	The process of inhibiting aggregation and assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that is dependent on interaction with a chaperone.
	GO:0043711	pilus organization	A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a pilus, a short filamentous structure on a bacterial cell, flagella-like in structure and generally present in many copies.
cellular component
	GO:0030288	outer membrane-bounded periplasmic space	The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin peptidoglycan layer (PGL), also referred to as a thin cell wall.
	GO:0042597	periplasmic space	The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).

Asymmetric Unit
	Complete Structure
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	Ligands, Modified Residues, Ions
(no "Ligands, Modified Residues, Ions" information available for 2os7)

	Sites
(no "Sites" information available for 2os7)

	Cis Peptide Bonds
		Thr A:64 - Pro A:65	[ RasMol ]
		Thr B:64 - Pro B:65	[ RasMol ]
		Thr C:64 - Pro C:65	[ RasMol ]
		Thr D:64 - Pro D:65	[ RasMol ]
		Thr E:64 - Pro E:65	[ RasMol ]
		Thr F:64 - Pro F:65	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	2os7
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
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	CAF1M_YERPE \| P26926
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		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
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	CAF1M_YERPE \| P26926
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UniProtKB/Swiss-Prot
	CAF1M_YERPE \| P26926	:	1p5u 1p5v 1z9s 3dos 3dpb 3dsn 4ay0 4ayf 4az8 4b0m

1p5u	X-RAY STRUCTURE OF THE TERNARY CAF1M:CAF1:CAF1 CHAPERONE: SUBUNIT:SUBUNIT COMPLEX
1p5v	X-RAY STRUCTURE OF THE CAF1M:CAF1 CHAPERONE:SUBUNIT PREASSEMBLY COMPLEX
1z9s	CRYSTAL STRUCTURE OF THE NATIVE CHAPERONE:SUBUNIT:SUBUNIT CAF1M:CAF1:CAF1 COMPLEX

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (6, 6)

Cis Peptide Bonds (6, 6)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 6)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 12)

CATH Domains (2, 12)

Pfam Domains (2, 12)

Gene Ontology (6, 6)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File