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2OS7
Asym. Unit
Info
Asym.Unit (196 KB)
Biol.Unit 1 (128 KB)
Biol.Unit 2 (126 KB)
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(1)
Title
:
CAF1M PERIPLASMIC CHAPERONE TETRAMER
Authors
:
S. D. Knight, A. Z. Zavialov
Date
:
05 Feb 07 (Deposition) - 17 Apr 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B (2x)
Biol. Unit 2: C,D,E,F (1x)
Keywords
:
Immunoglobulin Fold, Hetero Beta Barrel, Chaperone
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Z. Zavialov, S. D. Knight
A Novel Self-Capping Mechanism Controls Aggregation Of Periplasmic Chaperone Caf1M
Mol. Microbiol. V. 64 153 2007
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Hetero Components
(0, 0)
Info
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 6)
Info
All PROSITE Patterns/Profiles
1: PILI_CHAPERONE (A:87-104,B:87-103,C:87-103,D:87-10...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PILI_CHAPERONE
PS00635
Gram-negative pili assembly chaperone signature.
CAF1M_YERPE
110-127
6
A:87-104
B:87-103
C:87-103
D:87-103
E:87-103
F:88-103
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 12)
Info
All SCOP Domains
1a: SCOP_d2os7a2 (A:148-233)
1b: SCOP_d2os7b2 (B:148-233)
1c: SCOP_d2os7c2 (C:148-233)
1d: SCOP_d2os7d2 (D:148-232)
1e: SCOP_d2os7e2 (E:148-232)
1f: SCOP_d2os7f2 (F:148-233)
2a: SCOP_d2os7a1 (A:3-147)
2b: SCOP_d2os7b1 (B:6-147)
2c: SCOP_d2os7c1 (C:3-147)
2d: SCOP_d2os7d1 (D:6-147)
2e: SCOP_d2os7e1 (E:3-147)
2f: SCOP_d2os7f1 (F:6-147)
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Classes
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Folds
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)
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)
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)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
C2 domain-like
(198)
Superfamily
:
Periplasmic chaperone C-domain
(38)
Family
:
Periplasmic chaperone C-domain
(33)
Protein domain
:
Caf1m
(8)
Yersinia pestis [TaxId: 632]
(8)
1a
d2os7a2
A:148-233
1b
d2os7b2
B:148-233
1c
d2os7c2
C:148-233
1d
d2os7d2
D:148-232
1e
d2os7e2
E:148-232
1f
d2os7f2
F:148-233
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
PapD-like
(47)
Family
:
Pilus chaperone
(36)
Protein domain
:
Chaperone protein Caf1m
(8)
Yersinia pestis [TaxId: 632]
(8)
2a
d2os7a1
A:3-147
2b
d2os7b1
B:6-147
2c
d2os7c1
C:3-147
2d
d2os7d1
D:6-147
2e
d2os7e1
E:3-147
2f
d2os7f1
F:6-147
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CATH Domains
(2, 12)
Info
all CATH domains
1a: CATH_2os7C02 (C:149-232)
1b: CATH_2os7D02 (D:149-232)
1c: CATH_2os7F02 (F:149-232)
1d: CATH_2os7A02 (A:149-232)
1e: CATH_2os7E02 (E:149-232)
1f: CATH_2os7B02 (B:149-232)
2a: CATH_2os7A01 (A:14-145)
2b: CATH_2os7D01 (D:14-145)
2c: CATH_2os7F01 (F:14-145)
2d: CATH_2os7C01 (C:14-145)
2e: CATH_2os7E01 (E:14-145)
2f: CATH_2os7B01 (B:14-145)
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Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
[code=2.60.40.1070, no name defined]
(29)
Yersinia pestis. Organism_taxid: 632.
(5)
1a
2os7C02
C:149-232
1b
2os7D02
D:149-232
1c
2os7F02
F:149-232
1d
2os7A02
A:149-232
1e
2os7E02
E:149-232
1f
2os7B02
B:149-232
Homologous Superfamily
:
PapD-like
(38)
Yersinia pestis. Organism_taxid: 632.
(5)
2a
2os7A01
A:14-145
2b
2os7D01
D:14-145
2c
2os7F01
F:14-145
2d
2os7C01
C:14-145
2e
2os7E01
E:14-145
2f
2os7B01
B:14-145
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Pfam Domains
(2, 12)
Info
all PFAM domains
1a: PFAM_Pili_assembly_N_2os7F01 (F:13-148)
1b: PFAM_Pili_assembly_N_2os7F02 (F:13-148)
1c: PFAM_Pili_assembly_N_2os7F03 (F:13-148)
1d: PFAM_Pili_assembly_N_2os7F04 (F:13-148)
1e: PFAM_Pili_assembly_N_2os7F05 (F:13-148)
1f: PFAM_Pili_assembly_N_2os7F06 (F:13-148)
2a: PFAM_Pili_assembly_C_2os7F07 (F:167-230)
2b: PFAM_Pili_assembly_C_2os7F08 (F:167-230)
2c: PFAM_Pili_assembly_C_2os7F09 (F:167-230)
2d: PFAM_Pili_assembly_C_2os7F10 (F:167-230)
2e: PFAM_Pili_assembly_C_2os7F11 (F:167-230)
2f: PFAM_Pili_assembly_C_2os7F12 (F:167-230)
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Clans
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)
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)
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)
Organisms
(
)
(
)
Clan
:
E-set
(290)
Family
:
Pili_assembly_N
(20)
Yersinia pestis
(4)
1a
Pili_assembly_N-2os7F01
F:13-148
1b
Pili_assembly_N-2os7F02
F:13-148
1c
Pili_assembly_N-2os7F03
F:13-148
1d
Pili_assembly_N-2os7F04
F:13-148
1e
Pili_assembly_N-2os7F05
F:13-148
1f
Pili_assembly_N-2os7F06
F:13-148
Clan
:
no clan defined [family: Pili_assembly_C]
(20)
Family
:
Pili_assembly_C
(20)
Yersinia pestis
(4)
2a
Pili_assembly_C-2os7F07
F:167-230
2b
Pili_assembly_C-2os7F08
F:167-230
2c
Pili_assembly_C-2os7F09
F:167-230
2d
Pili_assembly_C-2os7F10
F:167-230
2e
Pili_assembly_C-2os7F11
F:167-230
2f
Pili_assembly_C-2os7F12
F:167-230
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