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Asym./Biol. Unit - manually (Jmol Viewer)

Asym./Biol. Unit (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF THE COMPLEX OF HUMAN MITOGEN ACTIVATED PROTEIN KINASE KINASE 5 PHOX DOMAIN (MAP2K5-PHOX) WITH HUMAN MITOGEN ACTIVATED PROTEIN KINASE KINASE KINASE 3 (MAP3K3B-PHOX)

Authors :   P. Filippakopoulos, P. Savitsky, E. Ugochukwu, A. Edwards, C. Arrowsm M. Sundstrom, F. Von Delft, S. Knapp, Structural Genomics Consort

Date :   30 Nov 06 (Deposition) - 12 Dec 06 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.83

Chains :   Asym./Biol. Unit : A,B

Keywords :   Mitogen Activated Protein Kinase Kinase 5, Map2K5, Mek5, Mkk5, Prkmk5, Map Kinase 5, Phox, Phox-Domain, Mitogen Activated Protein Kinase Kinase Kinase 3, Mekk3, Mapkkk3, Map/Erk Kinase Kinase 3, Structural Genomics, Structural Genomics Consortium, Sgc, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   P. Filippakopoulos, P. Savitsky, E. Ugochukwu, A. Edwards, C. Arrowsmith, M. Sundstrom, F. Von Delft, S. Knapp
Crystal Structure Of The Complex Of Human Mitogen Activated Protein Kinase Kinase 5 Phox Domain (Map2K5-Phox) With Huma Mitogen Activated Protein Kinase Kinase Kinase 3 (Map3K3B-Phox)
To Be Published
PubMed: search

Molecule 1 - DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5
	Chains	:	A
	EC Number	:	2.7.12.2
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PNIC28-BSA4
	Expression System Strain	:	BL21(DE3)-R3
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Fragment	:	MAP2K5-PHOX
	Gene	:	MAP2K5, MEK5, MKK5, PRKMK5
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	MAP KINASE KINASE 5, MAPKK 5, MAPK/ERK KINASE 5

Molecule 2 - MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3
	Chains	:	B
	EC Number	:	2.7.11.25
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PNIC28-BSA4
	Expression System Strain	:	BL21(DE3)-R3
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Fragment	:	MAP3K3B-PHOX
	Gene	:	MAP3K3, MAPKKK3, MEKK3
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	MAPK/ERK KINASE KINASE 3, MEK KINASE 3, MEKK 3

		1	2
Asymmetric/Biological Unit	:	A	B

Summary Information (see also Sequences/Alignments below)

(no "Ligand,Modified Residues,Ions" information available for 2O2V)

(no "Site" information available for 2O2V)

(no "SS Bond" information available for 2O2V)

Asymmetric/Biological Unit

No.	Residues
1	Arg B:62	-	Pro B:63

(no "SAP(SNP)/Variant" information available for 2O2V)

Asymmetric/Biological Unit (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PB1	PS51745	PB1 domain profile.	MP2K5_HUMAN	18-109	1	A:18-108
1	PB1	PS51745	PB1 domain profile.	M3K3_HUMAN	44-123	1	B:44-123

Asymmetric/Biological Unit (9, 9)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1b	ENST00000178640	1b	ENSE00001917690	chr15:67835047-67835808	762	MP2K5_HUMAN	1-45	45	1	A:16-45 (gaps)	30
1.2	ENST00000178640	2	ENSE00001036453	chr15:67842372-67842420	49	MP2K5_HUMAN	46-62	17	1	A:46-62	17
1.3a	ENST00000178640	3a	ENSE00001036480	chr15:67855621-67855688	68	MP2K5_HUMAN	62-84	23	1	A:62-84	23
1.4	ENST00000178640	4	ENSE00001137335	chr15:67873092-67873161	70	MP2K5_HUMAN	85-108	24	1	A:85-108	24
1.5	ENST00000178640	5	ENSE00001198269	chr15:67878228-67878268	41	MP2K5_HUMAN	108-121	14	1	A:108-108	1
1.6	ENST00000178640	6	ENSE00001198265	chr15:67879184-67879251	68	MP2K5_HUMAN	122-144	23	0	-	-
1.7	ENST00000178640	7	ENSE00001198260	chr15:67885264-67885312	49	MP2K5_HUMAN	144-160	17	0	-	-
1.8	ENST00000178640	8	ENSE00001137304	chr15:67893023-67893087	65	MP2K5_HUMAN	161-182	22	0	-	-
1.9	ENST00000178640	9	ENSE00001198254	chr15:67923226-67923265	40	MP2K5_HUMAN	182-195	14	0	-	-
1.13	ENST00000178640	13	ENSE00001389429	chr15:67938569-67938637	69	MP2K5_HUMAN	196-218	23	0	-	-
1.14	ENST00000178640	14	ENSE00000942561	chr15:67938726-67938807	82	MP2K5_HUMAN	219-246	28	0	-	-
1.15	ENST00000178640	15	ENSE00000942562	chr15:67950891-67950952	62	MP2K5_HUMAN	246-266	21	0	-	-
1.16	ENST00000178640	16	ENSE00001246489	chr15:67956935-67956983	49	MP2K5_HUMAN	267-283	17	0	-	-
1.17	ENST00000178640	17	ENSE00001036523	chr15:67984817-67984890	74	MP2K5_HUMAN	283-307	25	0	-	-
1.18	ENST00000178640	18	ENSE00001036516	chr15:67985856-67985906	51	MP2K5_HUMAN	308-324	17	0	-	-
1.19	ENST00000178640	19	ENSE00000885350	chr15:67995675-67995746	72	MP2K5_HUMAN	325-348	24	0	-	-
1.20	ENST00000178640	20	ENSE00001036564	chr15:68020254-68020283	30	MP2K5_HUMAN	349-358	10	0	-	-
1.21	ENST00000178640	21	ENSE00000942566	chr15:68040569-68040595	27	MP2K5_HUMAN	359-367	9	0	-	-
1.22	ENST00000178640	22	ENSE00001137226	chr15:68040907-68040939	33	MP2K5_HUMAN	368-378	11	0	-	-
1.23	ENST00000178640	23	ENSE00001137221	chr15:68061940-68062001	62	MP2K5_HUMAN	379-399	21	0	-	-
1.24	ENST00000178640	24	ENSE00001137214	chr15:68065045-68065090	46	MP2K5_HUMAN	399-414	16	0	-	-
1.25d	ENST00000178640	25d	ENSE00001890016	chr15:68098984-68099461	478	MP2K5_HUMAN	415-448	34	0	-	-

2.1	ENST00000361733	1	ENSE00001428739	chr17:61699801-61700123	323	M3K3_HUMAN	1-2	2	0	-	-
2.2	ENST00000361733	2	ENSE00001257248	chr17:61710041-61710162	122	M3K3_HUMAN	2-42	41	1	B:42-42	1
2.4	ENST00000361733	4	ENSE00000741937	chr17:61723394-61723434	41	M3K3_HUMAN	43-56	14	1	B:43-56	14
2.5	ENST00000361733	5	ENSE00001106004	chr17:61729917-61730016	100	M3K3_HUMAN	56-89	34	1	B:56-89	34
2.6	ENST00000361733	6	ENSE00000741940	chr17:61735154-61735267	114	M3K3_HUMAN	90-127	38	1	B:90-123	34
2.7	ENST00000361733	7	ENSE00000925304	chr17:61744300-61744420	121	M3K3_HUMAN	128-168	41	0	-	-
2.8	ENST00000361733	8	ENSE00001047122	chr17:61759126-61759259	134	M3K3_HUMAN	168-212	45	0	-	-
2.9	ENST00000361733	9	ENSE00000741943	chr17:61762877-61762950	74	M3K3_HUMAN	213-237	25	0	-	-
2.10	ENST00000361733	10	ENSE00000741949	chr17:61765887-61765954	68	M3K3_HUMAN	237-260	24	0	-	-
2.11	ENST00000361733	11	ENSE00000857855	chr17:61766149-61766241	93	M3K3_HUMAN	260-291	32	0	-	-
2.12	ENST00000361733	12	ENSE00000857856	chr17:61766904-61767095	192	M3K3_HUMAN	291-355	65	0	-	-
2.13	ENST00000361733	13	ENSE00000741987	chr17:61767624-61767772	149	M3K3_HUMAN	355-404	50	0	-	-
2.14	ENST00000361733	14	ENSE00000741989	chr17:61768462-61768593	132	M3K3_HUMAN	405-448	44	0	-	-
2.15	ENST00000361733	15	ENSE00000741993	chr17:61769093-61769222	130	M3K3_HUMAN	449-492	44	0	-	-
2.16	ENST00000361733	16	ENSE00001601451	chr17:61769602-61769779	178	M3K3_HUMAN	492-551	60	0	-	-
2.17	ENST00000361733	17	ENSE00001402070	chr17:61770909-61773667	2759	M3K3_HUMAN	551-626	76	0	-	-

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:92
 aligned with MP2K5_HUMAN | Q13163 from UniProtKB/Swiss-Prot  Length:448

    Alignment length:93
                                    25        35        45        55        65        75        85        95       105   
          MP2K5_HUMAN    16 VLVIRIKIPNSGAVDWTVHSGPQLLFRDVLDVIGQVLPEATTTAFEYEDEDGDRITVRSDEEMKAMLSYYYSTVMEQQVNGQLIEPLQIFPRA 108
               SCOP domains d2o2va_ A: Mitogen a ctivated protein kinase kinase 5, Map2k5                                 SCOP domains
               CATH domains 2o2vA00 A:16-108  [c ode=3.10.20.240, no name defined]                                        CATH domains
               Pfam domains --PB1-2o2vA01 A:18-1 01                                                               ------- Pfam domains
         Sec.struct. author .eeeeeee...eeeeeee..-...hhhhhhhhhhhhh......eeeee.....eeee.hhhhhhhhhhhhhhhhhhhhhhh.....eeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --PB1  PDB: A:18-108 UniProt: 18-109                                                          PROSITE
           Transcript 1 (1) Exon 1.1b  PDB: A:16-45 (gaps)Exon 1.2         ----------------------Exon 1.4  PDB: A:85-108  Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------Exon 1.3a  PDB: A:62-84-----------------------1 Transcript 1 (2)
                 2o2v A  16 VLVIRIKIPNSGAVDWTVHS-PQLLFRDVLDVIGQVLPEATTTAFEYEDEDGDRITVRSDEEMKAMLSYYYSTVMEQQVNGQLIEPLQIFPRA 108
                                    25        35 |      45        55        65        75        85        95       105   
                                              35 |                                                                       
                                                37

Chain B from PDB  Type:PROTEIN  Length:82
 aligned with M3K3_HUMAN | Q99759 from UniProtKB/Swiss-Prot  Length:626

    Alignment length:82
                                    51        61        71        81        91       101       111       121  
           M3K3_HUMAN    42 QSDVRIKFEHNGERRIIAFSRPVKYEDVEHKVTTVFGQPLDLHYMNNELSILLKNQDDLDKAIDILDRSSSMKSLRILLLSQ 123
               SCOP domains d2o2vb1 B:42-123 Mitogen-activated protein kinase kinase kinase 3, MEKK 3          SCOP domains
               CATH domains --2o2vB01 B:44-123  [code=3.10.20.240, no name defined]                            CATH domains
               Pfam domains --PB1-2o2vB01 B:44-123                                                             Pfam domains
         Sec.struct. author ...eeeeeee..eeeeeee....hhhhhhhhhhhhhh...eeeeee..eeeee.hhhhhhhhhhhhhhh.....eeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --PB1  PDB: B:44-123 UniProt: 44-123                                               PROSITE (2)
           Transcript 2 (1) 2Exon 2.4      ---------------------------------Exon 2.6  PDB: B:90-123            Transcript 2 (1)
           Transcript 2 (2) --------------Exon 2.5  PDB: B:56-89            ---------------------------------- Transcript 2 (2)
                 2o2v B  42 QSDVRIKFEHNGERRIIAFSRPVKYEDVEHKVTTVFGQPLDLHYMNNELSILLKNQDDLDKAIDILDRSSSMKSLRILLLSQ 123
                                    51        61        71        81        91       101       111       121

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: Roll (3276)

Topology: Ubiquitin-like (UB roll) (674)

Homologous Superfamily: [code=3.10.20.240, no name defined] (17)

Human (Homo sapiens) (9)

1a	2o2vB01	B:44-123
1b	2o2vA00	A:16-108

Asymmetric/Biological Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: Ubiquitin (279)

Family: PB1 (15)

Homo sapiens (Human) (8)

1a	PB1-2o2vB01	B:44-123
1b	PB1-2o2vA01	A:18-101

Asymmetric/Biological Unit(hide GO term definitions)

Chain A (MP2K5_HUMAN | Q13163)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0016301	kinase activity	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0004672	protein kinase activity	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
	GO:0004674	protein serine/threonine kinase activity	Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
	GO:0004713	protein tyrosine kinase activity	Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
	GO:0004702	signal transducer, downstream of receptor, with serine/threonine kinase activity	Conveys a signal from an upstream receptor or intracellular signal transducer by catalysis of the reaction: ATP protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0070375	ERK5 cascade	An intracellular protein kinase cascade containing at least ERK5 (also called BMK1; a MAPK), a MEK (a MAPKK) and a MAP3K. The cascade can also contain two additional tiers: the upstream MAP4K and the downstream MAP Kinase-activated kinase (MAPKAPK). The kinases in each tier phosphorylate and activate the kinases in the downstream tier to transmit a signal within a cell.
	GO:0000165	MAPK cascade	An intracellular protein kinase cascade containing at least a MAPK, a MAPKK and a MAP3K. The cascade can also contain two additional tiers: the upstream MAP4K and the downstream MAP Kinase-activated kinase (MAPKAPK). The kinases in each tier phosphorylate and activate the kinases in the downstream tier to transmit a signal within a cell.
	GO:0000187	activation of MAPK activity	The initiation of the activity of the inactive enzyme MAP kinase (MAPK).
	GO:0071363	cellular response to growth factor stimulus	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.
	GO:0071499	cellular response to laminar fluid shear stress	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a laminar fluid shear stress stimulus. Laminar fluid flow is the force acting on an object in a system where the fluid is moving across a solid surface in parallel layers.
	GO:0007507	heart development	The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
	GO:0032088	negative regulation of NF-kappaB transcription factor activity	Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB.
	GO:0090051	negative regulation of cell migration involved in sprouting angiogenesis	Any process that decreases the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogenesis.
	GO:2000342	negative regulation of chemokine (C-X-C motif) ligand 2 production	Any process that stops, prevents or reduces the frequency, rate or extent of chemokine (C-X-C motif) ligand 2 production.
	GO:0043154	negative regulation of cysteine-type endopeptidase activity involved in apoptotic process	Any process that stops, prevents, or reduces the frequency, rate or extent of a cysteine-type endopeptidase activity involved in the apoptotic process.
	GO:2001240	negative regulation of extrinsic apoptotic signaling pathway in absence of ligand	Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway in absence of ligand.
	GO:0034115	negative regulation of heterotypic cell-cell adhesion	Any process that stops, prevents, or reduces the frequency, rate, or extent of heterotypic cell-cell adhesion.
	GO:0045415	negative regulation of interleukin-8 biosynthetic process	Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-8.
	GO:0060761	negative regulation of response to cytokine stimulus	Any process that decreases the rate, frequency, or extent of a response to cytokine stimulus.
	GO:0000122	negative regulation of transcription from RNA polymerase II promoter	Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter.
	GO:0018108	peptidyl-tyrosine phosphorylation	The phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine.
	GO:0016310	phosphorylation	The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
	GO:0030307	positive regulation of cell growth	Any process that activates or increases the frequency, rate, extent or direction of cell growth.
	GO:0050679	positive regulation of epithelial cell proliferation	Any process that activates or increases the rate or extent of epithelial cell proliferation.
	GO:0051247	positive regulation of protein metabolic process	Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a protein.
	GO:0045944	positive regulation of transcription from RNA polymerase II promoter	Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
	GO:0006468	protein phosphorylation	The process of introducing a phosphate group on to a protein.
	GO:0007165	signal transduction	The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
	GO:0005819	spindle	The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.

Chain B (M3K3_HUMAN | Q99759)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0004709	MAP kinase kinase kinase activity	Catalysis of the phosphorylation and activation of a MAP kinase kinase; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases.
	GO:0016301	kinase activity	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0004672	protein kinase activity	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
	GO:0004674	protein serine/threonine kinase activity	Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0000165	MAPK cascade	An intracellular protein kinase cascade containing at least a MAPK, a MAPKK and a MAP3K. The cascade can also contain two additional tiers: the upstream MAP4K and the downstream MAP Kinase-activated kinase (MAPKAPK). The kinases in each tier phosphorylate and activate the kinases in the downstream tier to transmit a signal within a cell.
	GO:0000186	activation of MAPKK activity	The initiation of the activity of the inactive enzyme MAP kinase kinase (MAPKK).
	GO:0001568	blood vessel development	The process whose specific outcome is the progression of a blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood.
	GO:0035556	intracellular signal transduction	The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.
	GO:0016310	phosphorylation	The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
	GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	Any process that activates or increases the frequency, rate or extent of I-kappaB kinase/NF-kappaB signaling.
	GO:1900745	positive regulation of p38MAPK cascade	Any process that activates or increases the frequency, rate or extent of p38MAPK cascade.
	GO:0046777	protein autophosphorylation	The phosphorylation by a protein of one or more of its own amino acid residues (cis-autophosphorylation), or residues on an identical protein (trans-autophosphorylation).
	GO:0006468	protein phosphorylation	The process of introducing a phosphate group on to a protein.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

Asymmetric/Biological Unit
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	Ligands, Modified Residues, Ions
(no "Ligands, Modified Residues, Ions" information available for 2o2v)

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(no "Sites" information available for 2o2v)

	Cis Peptide Bonds
		Arg B:62 - Pro B:63	[ RasMol ]

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	2o2v
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		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	M3K3_HUMAN \| Q99759
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt
	MP2K5_HUMAN \| Q13163
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

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	2.7.11.25
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc
	2.7.12.2
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

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		Disease Information	:	OMIM

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		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
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Access by UniProt ID/Accession number
	M3K3_HUMAN \| Q99759
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)
	MP2K5_HUMAN \| Q13163
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	M3K3_HUMAN \| Q99759	:	2c60 2jrh 2pph 4y5o 4yl6
	MP2K5_HUMAN \| Q13163	:	2npt 4ic7

(no "Related Entries Specified in the PDB File" available for 2O2V)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (1, 1)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 2)

Exons (9, 9)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 2)

CATH Domains (1, 2)

Pfam Domains (1, 2)

Gene Ontology (44, 60)

Visualization

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Still Images

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Databases

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File