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(-) Description

Title :  STRUCTURE OF THE C-TERMINAL MEMBRANE DOMAIN OF HCV NS5B PROTEIN
 
Authors :  R. Montserret, F. Penin
Date :  15 Apr 15  (Deposition) - 20 Apr 16  (Release) - 20 Apr 16  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (41x)
NMR Structure *:  A  (1x)
Keywords :  Membrane Domain, Ns5B Protein, Hepatitis C Virus, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Montserret, F. Penin
Structure Of The C-Terminal Membrane Domain Of Hcv Ns5B Protein.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - NON-STRUCTURAL PROTEIN 5B, NS5B
    Chains: A
    Engineered: YES
    Fragment: C-TERMINAL DOMAIN (UNP RESIDUES 2982-3011)
    Mutation: YES
    Organism Common: HCV
    Organism Scientific: HEPATITIS C VIRUS
    Organism Taxid: 11108
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1
NMR Structure (41x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2N1P)

(-) Sites  (0, 0)

(no "Site" information available for 2N1P)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2N1P)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2N1P)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2N1P)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2N1P)

(-) Exons   (0, 0)

(no "Exon" information available for 2N1P)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:30
                                                             
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                  2n1p A  1 HSVSHARPRWFWFSLLLLAAGVGIYLLPNR 30
                                    10        20        30
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2N1P)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2N1P)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2N1P)

(-) Gene Ontology  (143, 143)

NMR Structure(hide GO term definitions)

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  2n1p
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  POLG_HCVH | P27958
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        POLG_HCVH | P27958: 1a1r 1a1v 1cwx 1hei 1jr6 1n1l 1onb 1r7c 1r7d 1r7e 1r7f 1r7g 1rgq 2a4r 2f9v 2hd0 2jxf 2kdr 2o8m 2obo 2obq 2oc0 2oc1 2oc7 2oc8 2oin 2p59 2qv1 2xi2 2xi3 2xni 4cl1 4jzn 4jzo 4mwf 4n0y 4q0x 4xvj 4z0x 5eoc 5erw 5fgb 5fgc

(-) Related Entries Specified in the PDB File

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