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(-) Description

Title :  SOLUTION NMR STRUCTURE OF PROTEIN CGL2762 FROM CORYNEBACTERIUM GLUTAMICUM: NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET CGR3
 
Authors :  K. K. Singarapu, D. K. Sukumaran, D. Parish, C. X. Chen, K. Cunningham, R. Xiao, G. V. T. Swapna, G. T. Montelione, T. Szyperski, Northeast Structural Genomics Consortium (Nesg)
Date :  28 Dec 06  (Deposition) - 27 Feb 07  (Release) - 09 Jun 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Gft Nmr, Psi-2, Protein Structure, Structural Genomics, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. K. Singarapu, R. Xiao, D. K. Sukumaran, T. Acton, G. T. Montelione, T. Szyperski
Nmr Structure Of Protein Cgl2762 From Corynebacterium Glutamicum Implicated In Dna Transposition Reveals A Helix-Turn-Helix Motif Attached To A Flexibly Disordered Leucine Zipper.
Proteins V. 70 1650 2008
PubMed-ID: 18175328  |  Reference-DOI: 10.1002/PROT.21840
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PROTEIN CGL2762
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)+MAGIC
    Expression System Taxid: 562
    Expression System Vector: PET21
    Expression System Vector Type: VECTOR
    Gene: TNP8A ISCG8A
    Organism Scientific: CORYNEBACTERIUM GLUTAMICUM
    Organism Taxid: 1718
    Strain: XL10
    Synonym: TRANSPOSASE

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:97
 aligned with Q8NM20_CORGL | Q8NM20 from UniProtKB/TrEMBL  Length:89

    Alignment length:97
                                                                                                                   89        
                                    10        20        30        40        50        60        70        80        |-       
          Q8NM20_CORGL    1 MPTKTYSEEFKRDAVALYENSDGASLQQIANDLGINRVTLKNWIIKYGSNHNVQGTTPSAAVSEAEQIRQLKKENALQRARTRHPAESC--------  -
               SCOP domains d2jn6a1 A:1-89 Uncharacterized protein Cgl2762                                           -------- SCOP domains
               CATH domains ------2jn6A01 A:7-91 Homeodomain-like                                                      ------ CATH domains
               Pfam domains HTH_Tnp_1-2jn6A01 A:1-77                                                     -------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhh....hhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------- Transcript
                  2jn6 A  1 MPTKTYSEEFKRDAVALYENSDGASLQQIANDLGINRVTLKNWIIKYGSNHNVQGTTPSAAVSEAEQIRQLKKENALQRARTRHPAESCLEHHHHHH 97
                                    10        20        30        40        50        60        70        80        90
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: HTH (544)

(-) Gene Ontology  (3, 3)

NMR Structure(hide GO term definitions)
Chain A   (Q8NM20_CORGL | Q8NM20)
molecular function
    GO:0003677    DNA binding    Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
    GO:0004803    transposase activity    Catalysis of the transposition of transposable elements or transposons. Transposases are involved in recombination required for transposition and are site-specific for the transposon/transposable element.
biological process
    GO:0006313    transposition, DNA-mediated    Any process involved in a type of transpositional recombination which occurs via a DNA intermediate.

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(-) Related Entries Specified in the PDB File

cgr3 RELATED ID: 15086 RELATED DB: BMRB