2JIH - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF HUMAN ADAMTS-1 CATALYTIC DOMAIN AND CYSTEINE-RICH DOMAIN (COMPLEX-FORM)

Authors :   S. Gerhardt, G. Hassall, P. Hawtin, E. Mccall, L. Flavell, C. Minshull, D. Hargreaves, A. Ting, R. A. Pauptit, A. E. Parker, W. M. Abbott

Date :   28 Jun 07 (Deposition) - 15 Jan 08 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.10

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Zinc, Zymogen, Protease, Adamts-1, Hydrolase, Metalloprotease, Heparin-Binding, Metalloproteinase, Metzincin, Polymorphism, Glycoprotein, Metal-Binding, Extracellular Matrix, Cleavage On Pair Of Basic Residues (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. Gerhardt, G. Hassall, P. Hawtin, E. Mccall, L. Flavell, C. Minshull, D. Hargreaves, A. Ting, R. A. Pauptit, A. E. Parker, W. M. Abbott
Crystal Structures Of Human Adamts-1 Reveal A Conserved Catalytic Domain And A Disintegrin-Like Domain With A Fold Homologous To Cysteine-Rich Domains.
J. Mol. Biol. V. 373 891 2007
PubMed-ID: 17897672 | Reference-DOI: 10.1016/J.JMB.2007.07.047

Molecule 1 - ADAMTS-1
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	SPODOPTERA FRUGIPERDA
	Expression System Plasmid	:	PFASTBAC
	Expression System Strain	:	SF21
	Expression System Taxid	:	7108
	Expression System Vector Type	:	BACULOVIRUS
	Fragment	:	CATALYTIC DOMAIN AND CYSTEINE-RICH DOMAIN, RESIDUES 253-548
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Other Details	:	MARIMASTAT (N4-(2,2-DIMETHYL-1- METHYLCARBAMOYL-PROPYL)-2, N1-DIHYDROXY-3-ISOBUTYL- SUCCINAMIDE)
	Synonym	:	A DISINTEGRIN AND METALLOPROTEINASE WITH THROMBOSPONDIN MOTIFS 1, ADAM-TS 1, ADAM-TS1, METH-1

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (6, 33)

No.	Name	Count	Type	Full Name
1	097	2	Ligand/Ion	(2S,3R)-N~4~-[(1S)-2,2-DIMETHYL-1-(METHYLCARBAMOYL)PROPYL]-N~1~,2-DIHYDROXY-3-(2-METHYLPROPYL)BUTANEDIAMIDE
2	CD	6	Ligand/Ion	CADMIUM ION
3	MG	6	Ligand/Ion	MAGNESIUM ION
4	NA	5	Ligand/Ion	SODIUM ION
5	NI	12	Ligand/Ion	NICKEL (II) ION
6	ZN	2	Ligand/Ion	ZINC ION

Biological Unit 1 (1, 1)

No.	Name	Count	Type	Full Name
1	097	1	Ligand/Ion	(2S,3R)-N~4~-[(1S)-2,2-DIMETHYL-1-(METHYLCARBAMOYL)PROPYL]-N~1~,2-DIHYDROXY-3-(2-METHYLPROPYL)BUTANEDIAMIDE
2	CD	-1	Ligand/Ion	CADMIUM ION
3	MG	-1	Ligand/Ion	MAGNESIUM ION
4	NA	-1	Ligand/Ion	SODIUM ION
5	NI	-1	Ligand/Ion	NICKEL (II) ION
6	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 2 (1, 1)

No.	Name	Count	Type	Full Name
1	097	1	Ligand/Ion	(2S,3R)-N~4~-[(1S)-2,2-DIMETHYL-1-(METHYLCARBAMOYL)PROPYL]-N~1~,2-DIHYDROXY-3-(2-METHYLPROPYL)BUTANEDIAMIDE
2	CD	-1	Ligand/Ion	CADMIUM ION
3	MG	-1	Ligand/Ion	MAGNESIUM ION
4	NA	-1	Ligand/Ion	SODIUM ION
5	NI	-1	Ligand/Ion	NICKEL (II) ION
6	ZN	-1	Ligand/Ion	ZINC ION

Asymmetric Unit (33, 33)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASP A:368 , THR A:369 , LEU A:370 , GLY A:371 , HIS A:401 , GLU A:402 , HIS A:405 , HIS A:411 , ALA A:431 , SER A:432 , MET A:433 , LEU A:434 , ZN A:1553 , HOH A:2066 , HOH A:2122	BINDING SITE FOR RESIDUE 097 A1001
02	AC2	SOFTWARE	ASP B:368 , THR B:369 , LEU B:370 , GLY B:371 , HIS B:401 , GLU B:402 , HIS B:405 , HIS B:411 , ALA B:431 , SER B:432 , MET B:433 , LEU B:434 , ZN B:1554 , HOH B:2087 , HOH B:2088	BINDING SITE FOR RESIDUE 097 B1001
03	AC3	SOFTWARE	HIS A:401 , HIS A:405 , HIS A:411 , 097 A:1001	BINDING SITE FOR RESIDUE ZN A1553
04	AC4	SOFTWARE	HIS B:401 , HIS B:405 , HIS B:411 , 097 B:1001	BINDING SITE FOR RESIDUE ZN B1554
05	AC5	SOFTWARE	GLU A:261 , ASP A:344 , ASP A:465 , HOH A:2038 , HOH A:2081	BINDING SITE FOR RESIDUE CD A1554
06	AC6	SOFTWARE	GLU A:315 , GLU A:320 , HOH A:2023 , HOH A:2026	BINDING SITE FOR RESIDUE CD A1555
07	AC7	SOFTWARE	GLU A:494 , HIS B:313 , HOH B:2010 , HOH B:2022 , HOH B:2028	BINDING SITE FOR RESIDUE NI A1556
08	AC8	SOFTWARE	HIS A:280 , HOH A:2046 , ASP B:483	BINDING SITE FOR RESIDUE CD A1557
09	AC9	SOFTWARE	GLU A:261 , ASP A:344 , ASP A:351 , CYS A:462 , ASP A:465 , HOH A:2080	BINDING SITE FOR RESIDUE CD A1558
10	BC1	SOFTWARE	ASP A:483 , HOH A:2089 , HIS B:280	BINDING SITE FOR RESIDUE CD B1555
11	BC2	SOFTWARE	HIS A:313 , GLU B:494 , ASP B:495	BINDING SITE FOR RESIDUE NI B1556
12	BC3	SOFTWARE	GLU B:261 , ASP B:344 , ASP B:465 , HOH B:2026 , HOH B:2063	BINDING SITE FOR RESIDUE CD B1557
13	BC4	SOFTWARE	GLU B:261 , ASP B:344 , ASP B:351 , CYS B:462 , ASP B:465 , HOH B:2061	BINDING SITE FOR RESIDUE NI B1558
14	BC5	SOFTWARE	HIS A:313 , HOH A:2009 , GLU B:494	BINDING SITE FOR RESIDUE NI B1559
15	BC6	SOFTWARE	GLU A:320 , HOH A:2024 , HOH A:2025	BINDING SITE FOR RESIDUE NI A1559
16	BC7	SOFTWARE	HIS A:339 , HOH A:2035	BINDING SITE FOR RESIDUE MG A1560
17	BC8	SOFTWARE	HIS A:428 , HOH A:2064	BINDING SITE FOR RESIDUE NI A1561
18	BC9	SOFTWARE	GLU A:494 , ASP A:495 , HIS B:313	BINDING SITE FOR RESIDUE NI A1562
19	CC1	SOFTWARE	HIS A:498 , HOH A:2100	BINDING SITE FOR RESIDUE NI A1563
20	CC2	SOFTWARE	HIS A:525 , HOH A:2073 , HOH A:2104	BINDING SITE FOR RESIDUE NI A1564
21	CC3	SOFTWARE	HIS B:439 , ASP B:530 , ASN B:542	BINDING SITE FOR RESIDUE MG B1560
22	CC4	SOFTWARE	HIS B:428 , HOH B:2051	BINDING SITE FOR RESIDUE NI B1561
23	CC5	SOFTWARE	HIS B:459	BINDING SITE FOR RESIDUE MG B1562
24	CC6	SOFTWARE	HIS B:498	BINDING SITE FOR RESIDUE NI B1563
25	CC7	SOFTWARE	ASP A:360 , LEU A:361 , CYS A:367 , THR A:369 , GLU A:389 , NA A:1566	BINDING SITE FOR RESIDUE NA A1565
26	CC8	SOFTWARE	ASP A:360 , CYS A:367 , NA A:1565 , HOH A:2050	BINDING SITE FOR RESIDUE NA A1566
27	CC9	SOFTWARE	PRO A:410 , ASP A:412 , MET A:430 , SER A:447	BINDING SITE FOR RESIDUE NA A1567
28	DC1	SOFTWARE	ASP B:360 , LEU B:361 , CYS B:367 , ASP B:368 , THR B:369 , GLU B:389 , NA B:1565 , HOH B:2039	BINDING SITE FOR RESIDUE NA B1564
29	DC2	SOFTWARE	ASP B:360 , CYS B:367 , NA B:1564 , HOH B:2039	BINDING SITE FOR RESIDUE NA B1565
30	DC3	SOFTWARE	HIS A:439 , HOH A:2069	BINDING SITE FOR RESIDUE NI A1568
31	DC4	SOFTWARE	VAL A:518 , LEU A:519 , HIS B:525	BINDING SITE FOR RESIDUE MG A1569
32	DC5	SOFTWARE	HIS B:339	BINDING SITE FOR RESIDUE MG B1566
33	DC6	SOFTWARE	HIS B:439	BINDING SITE FOR RESIDUE MG B1567

Asymmetric Unit

No.	Residues
1	A:333	-	A:385
2	A:362	-	A:367
3	A:379	-	A:462
4	A:417	-	A:446
5	A:488	-	A:511
6	A:499	-	A:521
7	A:506	-	A:540
8	A:534	-	A:545
9	B:333	-	B:385
10	B:362	-	B:367
11	B:379	-	B:462
12	B:417	-	B:446
13	B:488	-	B:511
14	B:499	-	B:521
15	B:506	-	B:540
16	B:534	-	B:545

(no "Cis Peptide Bond" information available for 2JIH)

(no "SAP(SNP)/Variant" information available for 2JIH)

Asymmetric Unit (3, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ADAM_MEPRO	PS50215	ADAM type metalloprotease domain profile.	ATS1_HUMAN	258-467	2	A:258-467 B:258-467
2	ZINC_PROTEASE	PS00142	Neutral zinc metallopeptidases, zinc-binding region signature.	ATS1_HUMAN	398-407	2	A:398-407 B:398-407
3	TSP1	PS50092	Thrombospondin type-1 (TSP1) repeat profile.	ATS1_HUMAN	559-614 908-967 854-905	2	A:550-551 B:550-551 - -

Biological Unit 1 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ADAM_MEPRO	PS50215	ADAM type metalloprotease domain profile.	ATS1_HUMAN	258-467	1	A:258-467 -
2	ZINC_PROTEASE	PS00142	Neutral zinc metallopeptidases, zinc-binding region signature.	ATS1_HUMAN	398-407	1	A:398-407 -
3	TSP1	PS50092	Thrombospondin type-1 (TSP1) repeat profile.	ATS1_HUMAN	559-614 908-967 854-905	1	A:550-551 - - -

Biological Unit 2 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ADAM_MEPRO	PS50215	ADAM type metalloprotease domain profile.	ATS1_HUMAN	258-467	1	- B:258-467
2	ZINC_PROTEASE	PS00142	Neutral zinc metallopeptidases, zinc-binding region signature.	ATS1_HUMAN	398-407	1	- B:398-407
3	TSP1	PS50092	Thrombospondin type-1 (TSP1) repeat profile.	ATS1_HUMAN	559-614 908-967 854-905	1	- B:550-551 - -

Asymmetric Unit (5, 10)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENST00000284984	1	ENSE00001017374	chr21:28217728-28216544	1185	ATS1_HUMAN	1-244	244	0	-	-
1.5	ENST00000284984	5	ENSE00001017377	chr21:28215004-28214658	347	ATS1_HUMAN	244-359	116	2	A:256-359 B:256-359	104 104
1.6c	ENST00000284984	6c	ENSE00001017373	chr21:28214309-28214177	133	ATS1_HUMAN	360-404	45	2	A:360-404 B:360-404	45 45
1.7d	ENST00000284984	7d	ENSE00001017382	chr21:28213484-28213317	168	ATS1_HUMAN	404-460	57	2	A:404-460 (gaps) B:404-460 (gaps)	57 57
1.8a	ENST00000284984	8a	ENSE00001017378	chr21:28212881-28212595	287	ATS1_HUMAN	460-555	96	2	A:460-548 (gaps) B:460-548 (gaps)	89 89
1.8d	ENST00000284984	8d	ENSE00001247753	chr21:28212380-28212194	187	ATS1_HUMAN	556-618	63	2	A:549-551 B:549-552	3 4
1.9a	ENST00000284984	9a	ENSE00001017375	chr21:28212081-28211906	176	ATS1_HUMAN	618-676	59	0	-	-
1.9c	ENST00000284984	9c	ENSE00001247815	chr21:28210933-28210758	176	ATS1_HUMAN	677-735	59	0	-	-
1.10b	ENST00000284984	10b	ENSE00001923806	chr21:28210597-28208606	1992	ATS1_HUMAN	735-967	233	0	-	-

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:284
 aligned with ATS1_HUMAN | Q9UHI8 from UniProtKB/Swiss-Prot  Length:967

    Alignment length:336
                                   265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585      
           ATS1_HUMAN   256 SHRYVETMLVADQSMAEFHGSGLKHYLLTLFSVAARLYKHPSIRNSVSLVVVKILVIHDEQKGPEVTSNAALTLRNFCNWQKQHNPPSDRDAEHYDTAILFTRQDLCGSQTCDTLGMADVGTVCDPSRSCSVIEDDGLQAAFTTAHELGHVFNMPHDDAKQCASLNGVNQDSHMMASMLSNLDHSQPWSPCSAYMITSFLDNGHGECLMDKPQNPIQLPGDLPGTSYDANRQCQFTFGEDSKHCPDAASTCSTLWCTGTSGGVLVCQTKHFPWADGTSCGEGKWCINGKCVNKTDRKHFDTPFHGSWGMWGPWGDCSRTCGGGVQYTMRECDNPVP 591
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeeeehhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeee..hhhhh.....hhhhhhhhhhhhhhh.............eeeeee.............eee...........eeeee....hhhhhhhhhhhhhh......hhhhh...----..................hhhhhhhhhhhhhh..hhhhh............hhhhhhhhhhhhhhhhh.......----.....eeee----..eeee..............eeee..eeee.----------------------------------------... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) --ADAM_MEPRO  PDB: A:258-467 UniProt: 258-467                                                                                                                                                                       -------------------------------------------------------------------------------------------TSP1  PDB: A:550-551              PROSITE (1)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------ZINC_PROTE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.5  PDB: A:256-359 UniProt: 244-359 [INCOMPLETE]                                                  Exon 1.6c  PDB: A:360-404 UniProt: 360-404   -------------------------------------------------------Exon 1.8a  PDB: A:460-548 (gaps) UniProt: 460-555 [INCOMPLETE]                                  Exon 1.8d  PDB: A:549-551            Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.7d  PDB: A:404-460 (gaps) UniProt: 404-460        ----------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2jih A 256 SHRYVETMLVADQSMAEFHGSGLKHYLLTLFSVAARLYKHPSIRNSVSLVVVKILVIHDEQKGPEVTSNAALTLRNFCNWQKQHNPPSDRDAEHYDTAILFTRQDLCGSQTCDTLGMADVGTVCDPSRSCSVIEDDGLQAAFTTAHELGHVFNMPHDDAKQCASLN----DSHMMASMLSNLDHSQPWSPCSAYMITSFLDNGHGECLMDKPQNPIQLPGDLPGTSYDANRQCQFTFGEDSKHCP----TCSTLWCTG----VLVCQTKHFPWADGTSCGEGKWCINGKCVNK----------------------------------------LVP 551
                                   265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415     |   -|      435       445       455       465       475       485       495    |  505       | -  |    525       535       545  |      -         -         -         -   |  
                                                                                                                                                                                               421  426                                                                       500  505     513  518                           548                                      549

Chain B from PDB  Type:PROTEIN  Length:286
 aligned with ATS1_HUMAN | Q9UHI8 from UniProtKB/Swiss-Prot  Length:967

    Alignment length:337
                                   265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       
           ATS1_HUMAN   256 SHRYVETMLVADQSMAEFHGSGLKHYLLTLFSVAARLYKHPSIRNSVSLVVVKILVIHDEQKGPEVTSNAALTLRNFCNWQKQHNPPSDRDAEHYDTAILFTRQDLCGSQTCDTLGMADVGTVCDPSRSCSVIEDDGLQAAFTTAHELGHVFNMPHDDAKQCASLNGVNQDSHMMASMLSNLDHSQPWSPCSAYMITSFLDNGHGECLMDKPQNPIQLPGDLPGTSYDANRQCQFTFGEDSKHCPDAASTCSTLWCTGTSGGVLVCQTKHFPWADGTSCGEGKWCINGKCVNKTDRKHFDTPFHGSWGMWGPWGDCSRTCGGGVQYTMRECDNPVPK 592
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) --Reprolysin-2jihB01 B:258-467                                                                                                                                                                                      ---------------------------------    ----------    ------------------------------                                        ---- Pfam domains (1)
           Pfam domains (2) --Reprolysin-2jihB02 B:258-467                                                                                                                                                                                      ---------------------------------    ----------    ------------------------------                                        ---- Pfam domains (2)
         Sec.struct. author ..eeeeeeeeehhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh..eeeeeeeeee..hhhhh.....hhhhhhhhhhhhhhhhh...........eeeeee.............eee...........eeeee....hhhhhhhhhhhhhh..............---...................hhhhhhhhhhhhhh..hhhhh............hhhhhhhhhhhhhhhhh.......----.....eeee.----.eeee.........eee..eeee..eeee.----------------------------------------.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) --ADAM_MEPRO  PDB: B:258-467 UniProt: 258-467                                                                                                                                                                       -------------------------------------------------------------------------------------------TSP1  PDB: B:550-551               PROSITE (1)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------ZINC_PROTE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.5  PDB: B:256-359 UniProt: 244-359 [INCOMPLETE]                                                  Exon 1.6c  PDB: B:360-404 UniProt: 360-404   -------------------------------------------------------Exon 1.8a  PDB: B:460-548 (gaps) UniProt: 460-555 [INCOMPLETE]                                  Exon 1.8d  PDB: B:549-552             Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.7d  PDB: B:404-460 (gaps) UniProt: 404-460        ------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 2jih B 256 SHRYVETMLVADQSMAEFHGSGLKHYLLTLFSVAARLYKHPSIRNSVSLVVVKILVIHDEQKGPEVTSNAALTLRNFCNWQKQHNPPSDRDAEHYDTAILFTRQDLCGSQTCDTLGMADVGTVCDPSRSCSVIEDDGLQAAFTTAHELGHVFNMPHDDAKQCASLN---QDSHMMASMLSNLDHSQPWSPCSAYMITSFLDNGHGECLMDKPQNPIQLPGDLPGTSYDANRQCQFTFGEDSKHCP----TCSTLWCTGT----LVCQTKHFPWADGTSCGEGKWCINGKCVNK----------------------------------------LVPR 552
                                   265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415     | 425       435       445       455       465       475       485       495    |  505        |-   |   525       535       545  |      -         -         -         -   |   
                                                                                                                                                                                               421 425                                                                        500  505      514  519                          548                                      549

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 2JIH)

(no "CATH Domain" information available for 2JIH)

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: Peptidase_MA (251)

Family: Reprolysin (9)

Homo sapiens (Human) (9)

1a	Reprolysin-2jihB01	B:258-467
1b	Reprolysin-2jihB02	B:258-467

Asymmetric Unit(hide GO term definitions)

Chain A,B (ATS1_HUMAN | Q9UHI8)

molecular function
	GO:0008201	heparin binding	Interacting selectively and non-covalently with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0004222	metalloendopeptidase activity	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
	GO:0008237	metallopeptidase activity	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
	GO:0008233	peptidase activity	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
	GO:0008270	zinc ion binding	Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
	GO:0071374	cellular response to parathyroid hormone stimulus	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a parathyroid hormone stimulus.
	GO:0071380	cellular response to prostaglandin E stimulus	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin E stimulus.
	GO:0071305	cellular response to vitamin D	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin D stimulus.
	GO:0060347	heart trabecula formation	The process of creating a trabecula in the heart. A trabecula is a tissue element in the form of a small beam, strut or rod.
	GO:0007229	integrin-mediated signaling pathway	A series of molecular signals initiated by the binding of extracellular ligand to an integrin on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription.
	GO:0001822	kidney development	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and/or excretes the end products of body metabolism in the form of urine.
	GO:0008285	negative regulation of cell proliferation	Any process that stops, prevents or reduces the rate or extent of cell proliferation.
	GO:0030728	ovulation	The release of a mature ovum/oocyte from an ovary.
	GO:0001542	ovulation from ovarian follicle	The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct. An example of this is found in Mus musculus.
	GO:0010976	positive regulation of neuron projection development	Any process that increases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).
	GO:0006508	proteolysis	The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
	GO:0044691	tooth eruption	The tooth development process in which the teeth enter the mouth and become visible.
cellular component
	GO:0005604	basement membrane	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0031410	cytoplasmic vesicle	A vesicle found in the cytoplasm of a cell.
	GO:0031012	extracellular matrix	A structure lying external to one or more cells, which provides structural support for cells or tissues.
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
	GO:0005578	proteinaceous extracellular matrix	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity. An example of this component is found in Mus musculus.

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	ATS1_HUMAN \| Q9UHI8	:	2v4b 3q2g 3q2h

2v4b	CRYSTAL STRUCTURE OF HUMAN ADAMTS-1 CATALYTIC DOMAIN AND CYSTEINE-RICH DOMAIN ( APO-FORM)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (6, 33)

Sites (33, 33)

SS Bonds (16, 16)

Cis Peptide Bonds (0, 0)

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PROSITE Motifs (3, 6)

Exons (5, 10)

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Gene Ontology (25, 25)

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Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File