Chain A from PDB Type:PROTEIN Length:169
aligned with MDDA_PSEA7 | A6VCX3 from UniProtKB/Swiss-Prot Length:172
Alignment length:169
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163
MDDA_PSEA7 4 SIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNLDPTRSAP 172
SCOP domains d2j8na_ A: Hypothetical protein PA4866 SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee.hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh..eeeee.....eeeeeeeee...hhhhh.eeeeeeee.hhhh..hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhh...eeeeeeeeeeee..eeeeeeeeeee........ Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE GNAT PDB: - UniProt: 3-166 ------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2j8n A 4 SIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNLDPTRSAP 172
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163
Chain A from PDB Type:PROTEIN Length:169
aligned with MDDA_PSEAE | Q9HUU7 from UniProtKB/Swiss-Prot Length:172
Alignment length:169
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163
MDDA_PSEAE 4 SIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDTRARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNLDPTRSAP 172
SCOP domains d2j8na_ A: Hypothetical protein PA4866 SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee.hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh..eeeee.....eeeeeeeee...hhhhh.eeeeeeee.hhhh..hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhh...eeeeeeeeeeee..eeeeeeeeeee........ Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) GNAT PDB: - UniProt: 3-166 ------ PROSITE (2)
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2j8n A 4 SIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNLDPTRSAP 172
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163
Chain B from PDB Type:PROTEIN Length:170
aligned with MDDA_PSEA7 | A6VCX3 from UniProtKB/Swiss-Prot Length:172
Alignment length:170
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172
MDDA_PSEA7 3 ASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNLDPTRSAP 172
SCOP domains d2j8nb_ B: Hypothetical protein PA4866 SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee.hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh..eeeee.....eeeeeeeee...hhhhh.eeeeeeee.hhhh..hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhh...eeeeeeeeeeee..eeeeeeeeeee........ Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE GNAT PDB: B:3-166 UniProt: 3-166 ------ PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2j8n B 3 ASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNLDPTRSAP 172
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172
Chain B from PDB Type:PROTEIN Length:170
aligned with MDDA_PSEAE | Q9HUU7 from UniProtKB/Swiss-Prot Length:172
Alignment length:170
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172
MDDA_PSEAE 3 ASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDTRARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNLDPTRSAP 172
SCOP domains d2j8nb_ B: Hypothetical protein PA4866 SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee.hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh..eeeee.....eeeeeeeee...hhhhh.eeeeeeee.hhhh..hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhh...eeeeeeeeeeee..eeeeeeeeeee........ Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) GNAT PDB: B:3-166 UniProt: 3-166 ------ PROSITE (2)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2j8n B 3 ASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNLDPTRSAP 172
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |