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Title :   STRUCTURE OF P. AERUGINOSA ACETYLTRANSFERASE PA4866

Authors :   A. M. Davies, R. Tata, R. L. Beavil, B. J. Sutton, P. R. Brown

Date :   26 Oct 06 (Deposition) - 06 Feb 07 (Release) - 01 Aug 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.44

Chains :   Asym./Biol. Unit : A,B

Keywords :   Gcn5 Family, Phosphinothricin, Methionine Sulfone, Transferase Methionine Sulfoximine, N-Acetyl Transferase, Hypothetical Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. M. Davies, R. Tata, R. L. Beavil, B. J. Sutton, P. R. Brown
L-Methionine Sulfoximine, But Not Phosphinothricin, Is A Substrate For An Acetyltransferase (Gene Pa4866) From Pseudomonas Aeruginosa: Structural And Functional Studies.
Biochemistry V. 46 1829 2007
PubMed-ID: 17253769 | Reference-DOI: 10.1021/BI0615238
(for further references see the PDB file header)

Molecule 1 - ACETYLTRANSFERASE PA4866 FROM P. AERUGINOSA
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector	:	PET24A
	Organism Scientific	:	PSEUDOMONAS AERUGINOSA
	Organism Taxid	:	287
	Strain	:	PAC1 (8602)

		1	2
Asymmetric/Biological Unit	:	A	B

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (3, 15)

No.	Name	Count	Type	Full Name
1	AZI	8	Ligand/Ion	AZIDE ION
2	GOL	6	Ligand/Ion	GLYCEROL
3	SO4	1	Ligand/Ion	SULFATE ION

Asymmetric Unit (15, 15)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	TRP A:74 , ARG A:75 , PHE A:160 , TRP B:74 , ARG B:75 , PHE B:160	BINDING SITE FOR RESIDUE AZI A1173
02	AC2	SOFTWARE	ASN A:127 , HOH A:2171 , HOH A:2229 , HOH A:2281 , HOH A:2282 , HOH A:2283	BINDING SITE FOR RESIDUE AZI A1174
03	AC3	SOFTWARE	ARG B:95 , ASN B:127 , SO4 B:1179 , HOH B:2226 , HOH B:2260 , HOH B:2261	BINDING SITE FOR RESIDUE AZI B1173
04	AC4	SOFTWARE	GLY B:138 , GLU B:140 , GLN B:162 , LEU B:163 , ASN B:164 , HOH B:2222 , HOH B:2263 , HOH B:2264	BINDING SITE FOR RESIDUE AZI B1174
05	AC5	SOFTWARE	VAL B:101 , LEU B:133 , ARG B:136 , HOH B:2213 , HOH B:2265	BINDING SITE FOR RESIDUE AZI B1175
06	AC6	SOFTWARE	ARG B:6 , GLY B:9 , ALA B:11 , ASP B:12 , HOH B:2267	BINDING SITE FOR RESIDUE AZI B1176
07	AC7	SOFTWARE	GLY A:126 , HOH A:2222 , ARG B:136 , HOH B:2269	BINDING SITE FOR RESIDUE AZI B1177
08	AC8	SOFTWARE	ILE B:16 , TYR B:20 , ARG B:41 , TRP B:44 , TYR B:68 , HOH B:2270	BINDING SITE FOR RESIDUE AZI B1178
09	AC9	SOFTWARE	VAL B:88 , GLY B:100 , LEU B:133 , AZI B:1173 , HOH B:2272 , HOH B:2273	BINDING SITE FOR RESIDUE SO4 B1179
10	BC1	SOFTWARE	ALA A:29 , ALA A:122 , HOH A:2071 , HOH A:2217 , HOH A:2284 , ARG B:75 , PHE B:80	BINDING SITE FOR RESIDUE GOL A1175
11	BC2	SOFTWARE	GLN A:51 , ASP A:73 , ARG A:75 , PHE A:77 , PHE A:80 , ARG A:81 , HOH A:2163 , HOH A:2164 , HOH A:2285	BINDING SITE FOR RESIDUE GOL A1176
12	BC3	SOFTWARE	ARG A:75 , PHE A:80 , ALA B:29 , TRP B:31 , ALA B:122 , HOH B:2200 , HOH B:2274 , HOH B:2275	BINDING SITE FOR RESIDUE GOL B1180
13	BC4	SOFTWARE	ASP B:22 , ASN B:26 , ASP B:92 , ARG B:135 , HOH B:2276 , HOH B:2277 , HOH B:2278	BINDING SITE FOR RESIDUE GOL B1181
14	BC5	SOFTWARE	ILE B:5 , ARG B:6 , ASP B:7 , ARG B:110 , HOH B:2279	BINDING SITE FOR RESIDUE GOL B1182
15	BC6	SOFTWARE	ALA B:113	BINDING SITE FOR RESIDUE GOL B1183

(no "SS Bond" information available for 2J8M)

(no "Cis Peptide Bond" information available for 2J8M)

(no "SAP(SNP)/Variant" information available for 2J8M)

Asymmetric/Biological Unit (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GNAT	PS51186	Gcn5-related N-acetyltransferase (GNAT) domain profile.	MDDA_PSEA7	3-166	2	A:3-166 B:3-166
1	GNAT	PS51186	Gcn5-related N-acetyltransferase (GNAT) domain profile.	MDDA_PSEAE	3-166	2	A:3-166 B:3-166

(no "Exon" information available for 2J8M)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:171
 aligned with MDDA_PSEA7 | A6VCX3 from UniProtKB/Swiss-Prot  Length:172

    Alignment length:171
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171 
           MDDA_PSEA7     2 SASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNLDPTRSAP 172
               SCOP domains d2j8ma_ A: Hypothetical protein PA4866                                                                                                                                      SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee.hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh..eeeee.....eeeeeeeee...hhhhh.eeeeeeee.......hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh..eeeeeeeeeeee..eeeeeeeeeee........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -GNAT  PDB: A:3-166 UniProt: 3-166                                                                                                                                   ------ PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2j8m A   2 SASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNLDPTRSAP 172
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171

Chain A from PDB  Type:PROTEIN  Length:171
 aligned with MDDA_PSEAE | Q9HUU7 from UniProtKB/Swiss-Prot  Length:172

    Alignment length:171
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171 
           MDDA_PSEAE     2 SASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDTRARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNLDPTRSAP 172
               SCOP domains d2j8ma_ A: Hypothetical protein PA4866                                                                                                                                      SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee.hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh..eeeee.....eeeeeeeee...hhhhh.eeeeeeee.......hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh..eeeeeeeeeeee..eeeeeeeeeee........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -GNAT  PDB: A:3-166 UniProt: 3-166                                                                                                                                   ------ PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2j8m A   2 SASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNLDPTRSAP 172
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171

Chain B from PDB  Type:PROTEIN  Length:170
 aligned with MDDA_PSEA7 | A6VCX3 from UniProtKB/Swiss-Prot  Length:172

    Alignment length:170
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172
           MDDA_PSEA7     3 ASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNLDPTRSAP 172
               SCOP domains d2j8mb_ B: Hypothetical protein PA4866                                                                                                                                     SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh..eeeee.....eeeeeeeee...hhhhh.eeeeeeee.hhhh..hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhh...eeeeeeeeeeee..eeeeeeeeeee........ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) GNAT  PDB: B:3-166 UniProt: 3-166                                                                                                                                   ------ PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2j8m B   3 ASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNLDPTRSAP 172
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172

Chain B from PDB  Type:PROTEIN  Length:170
 aligned with MDDA_PSEAE | Q9HUU7 from UniProtKB/Swiss-Prot  Length:172

    Alignment length:170
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172
           MDDA_PSEAE     3 ASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDTRARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNLDPTRSAP 172
               SCOP domains d2j8mb_ B: Hypothetical protein PA4866                                                                                                                                     SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh..eeeee.....eeeeeeeee...hhhhh.eeeeeeee.hhhh..hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhh...eeeeeeeeeeee..eeeeeeeeeee........ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE GNAT  PDB: B:3-166 UniProt: 3-166                                                                                                                                   ------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2j8m B   3 ASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNLDPTRSAP 172
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: Acyl-CoA N-acyltransferases (Nat) (250)

Superfamily: Acyl-CoA N-acyltransferases (Nat) (250)

Family: N-acetyl transferase, NAT (154)

Protein domain: Hypothetical protein PA4866 (5)

Pseudomonas aeruginosa [TaxId: 287] (5)

1a	d2j8ma_	A:
1b	d2j8mb_	B:

(no "CATH Domain" information available for 2J8M)

(no "Pfam Domain" information available for 2J8M)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B (MDDA_PSEA7 | A6VCX3)


GO:0008080	N-acetyltransferase activity	Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.
GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
GO:0016746	transferase activity, transferring acyl groups	Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).

Chain A,B (MDDA_PSEAE | Q9HUU7)

molecular function
	GO:0008080	N-acetyltransferase activity	Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.
	GO:0004596	peptide alpha-N-acetyltransferase activity	Catalysis of the reaction: acetyl-CoA + peptide = CoA + N-alpha-acetylpeptide. This reaction is the acetylation of the N-terminal amino acid residue of a peptide or protein.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
	GO:0016746	transferase activity, transferring acyl groups	Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).
biological process
	GO:0006474	N-terminal protein amino acid acetylation	The acetylation of the N-terminal amino acid of proteins.
cellular component
	GO:0031248	protein acetyltransferase complex	A complex that catalyzes the transfer of an acetyl group to a protein acceptor molecule.

Asymmetric/Biological Unit
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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 2j8m)

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UniProtKB/Swiss-Prot
	MDDA_PSEA7 \| A6VCX3	:	2j8n 2j8r
	MDDA_PSEAE \| Q9HUU7	:	1yvo 2bl1 2j8n 2j8r

1yvo	HYPOTHETICAL ACETYLTRANSFERASE FROM P.AERUGINOSA PA01
2bl1	CRYSTAL STRUCTURE OF A PUTATIVE PHOSPHINOTHRICIN ACETYLTRANSFERASE (PA4866) FROM PSEUDOMONAS AERUGINOSA PAC1
2j8n	STRUCTURE OF P. AERUGINOSA ACETYLTRANSFERASE PA4866 SOLVED AT ROOM TEMPERATURE
2j8r	STRUCTURE OF P. AERUGINOSA ACETYLTRANSFERASE PA4866 SOLVED IN COMPLEX WITH L-METHIONINE SULFOXIMINE

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 15)

Sites (15, 15)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 2)

Exons (0, 0)

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SCOP Domains (1, 2)

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Gene Ontology (7, 11)

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