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(-) Description

Title :  CRYSTAL STRUCTURE OF D138N MUTANT OF DRP35, A 35KDA DRUG RESPONSIVE PROTEIN FROM STAPHYLOCOCCUS AUREUS
 
Authors :  Y. Tanaka, Y. Ohki, K. Morikawa, M. Yao, N. Watanabe, T. Ohta, I. Tanaka
Date :  04 Jul 06  (Deposition) - 12 Dec 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Biol. Unit 7:  A (1x),B (1x),C (1x)
Keywords :  Beta Propeller, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Tanaka, K. Morikawa, Y. Ohki, M. Yao, K. Tsumoto, N. Watanabe, T. Ohta, I. Tanaka
Structural And Mutational Analyses Of Drp35 From Staphylococcus Aureus: A Possible Mechanism For Its Lactonase Activity
J. Biol. Chem. V. 282 5770 2007
PubMed-ID: 17166853  |  Reference-DOI: 10.1074/JBC.M607340200

(-) Compounds

Molecule 1 - DRP35
    Chains: A, B, C, D, E, F
    EC Number: 3.1.1.25
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28B
    Expression System Strain: B834(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Mutation: YES
    Organism Scientific: STAPHYLOCOCCUS AUREUS
    Organism Taxid: 1280

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): A     
Biological Unit 2 (1x):  B    
Biological Unit 3 (1x):   C   
Biological Unit 4 (1x):    D  
Biological Unit 5 (1x):     E 
Biological Unit 6 (1x):      F
Biological Unit 7 (1x): A (1x)B (1x)C (1x)   

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 15)

Asymmetric Unit (2, 15)
No.NameCountTypeFull Name
1CA12Ligand/IonCALCIUM ION
2GOL3Ligand/IonGLYCEROL
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GOL1Ligand/IonGLYCEROL
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GOL-1Ligand/IonGLYCEROL
Biological Unit 3 (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GOL-1Ligand/IonGLYCEROL
Biological Unit 4 (1, 2)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GOL2Ligand/IonGLYCEROL
Biological Unit 5 (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GOL-1Ligand/IonGLYCEROL
Biological Unit 6 (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GOL-1Ligand/IonGLYCEROL
Biological Unit 7 (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GOL-1Ligand/IonGLYCEROL

(-) Sites  (15, 15)

Asymmetric Unit (15, 15)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:48 , ASN A:138 , ASN A:185 , ASP A:236 , SER A:237 , HOH A:5034 , HOH A:5104BINDING SITE FOR RESIDUE CA A 1001
02AC2SOFTWAREGLU B:48 , ASN B:138 , ASN B:185 , ASP B:236 , SER B:237 , HOH B:1011 , HOH B:1038 , HOH B:1151BINDING SITE FOR RESIDUE CA B 1002
03AC3SOFTWAREGLU C:48 , ASN C:138 , ASN C:185 , ASP C:236 , SER C:237 , HOH C:1037 , HOH C:1040 , HOH C:1133BINDING SITE FOR RESIDUE CA C 1003
04AC4SOFTWAREGLU D:48 , ASN D:138 , ASN D:185 , ASP D:236 , SER D:237 , HOH D:5012 , HOH D:5018 , HOH D:5084BINDING SITE FOR RESIDUE CA D 1004
05AC5SOFTWAREGLU E:48 , ASN E:138 , ASN E:185 , ASP E:236 , SER E:237 , HOH E:1072 , HOH E:1175BINDING SITE FOR RESIDUE CA E 1005
06AC6SOFTWAREGLU F:48 , ASN F:138 , ASN F:185 , ASP F:236 , SER F:237 , HOH F:1047 , HOH F:1139BINDING SITE FOR RESIDUE CA F 1006
07AC7SOFTWARESER A:110 , GLY A:112 , ASP A:130 , THR A:133 , TYR A:135BINDING SITE FOR RESIDUE CA A 1007
08AC8SOFTWARESER B:110 , GLY B:112 , ASP B:130 , THR B:133 , TYR B:135BINDING SITE FOR RESIDUE CA B 1008
09AC9SOFTWARESER C:110 , THR C:111 , GLY C:112 , ASP C:130 , THR C:133 , ALA C:134 , TYR C:135 , HOH C:1120BINDING SITE FOR RESIDUE CA C 1009
10BC1SOFTWARESER D:110 , GLY D:112 , ASP D:130 , THR D:133 , TYR D:135BINDING SITE FOR RESIDUE CA D 1010
11BC2SOFTWARESER E:110 , GLY E:112 , ASP E:130 , THR E:133 , TYR E:135BINDING SITE FOR RESIDUE CA E 1011
12BC3SOFTWARESER F:110 , GLY F:112 , ASP F:130 , THR F:133 , TYR F:135BINDING SITE FOR RESIDUE CA F 1012
13BC4SOFTWARECYS D:239 , ILE D:240 , GLN D:286 , PHE D:287 , GLY D:318 , HIS D:319 , HOH D:5016 , HOH D:5108BINDING SITE FOR RESIDUE GOL D 5001
14BC5SOFTWARELYS A:16 , HOH A:5097 , SER B:27 , HOH B:1093BINDING SITE FOR RESIDUE GOL A 5002
15BC6SOFTWARELYS D:16 , ILE D:23 , SER F:27 , THR F:31 , HOH F:1098BINDING SITE FOR RESIDUE GOL D 5003

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2DSO)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric Unit
No.Residues
1His A:232 -Glu A:233
2His B:232 -Glu B:233
3His C:232 -Glu C:233
4His D:232 -Glu D:233
5His E:232 -Glu E:233
6His F:232 -Glu F:233

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2DSO)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2DSO)

(-) Exons   (0, 0)

(no "Exon" information available for 2DSO)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:322
 aligned with DRP35_STAAM | Q99QV3 from UniProtKB/Swiss-Prot  Length:324

    Alignment length:322
                                                                                                                                                                                                                                                                                                                                                          324 
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323| 
          DRP35_STAAM     4 QQDLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAKGHQSFQFQ-   -
               SCOP domains d2dsoa1 A:5-324 Lactonase Drp35                                                                                                                                                                                                                                                                                                 -- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhh.....hhhhh.eee.eeeeeee.....eeeeee.....eeeee....eeeee......eeeeee.....eeeeee.....eeeee........eeeee.......eeee........eeeeee.....eeeee.........eeeeee......eeeeeeee..eeeeee.....eeeeee....eeeeeee......eeeeeeeeeee.....eeeeeee.....eeeeee...eeeee.....eeeeee..hhhhh......eeee.....eeeeeee.hhhh..eeeeeee.......hhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2dso A   5 QQDLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCINDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAKGHQSFQFQL 326
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324  


Chain B from PDB  Type:PROTEIN  Length:321
 aligned with DRP35_STAAM | Q99QV3 from UniProtKB/Swiss-Prot  Length:324

    Alignment length:321
                                                                                                                                                                                                                                                                                                                                                        324  
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315        |- 
          DRP35_STAAM     6 DLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAKGHQSFQFQ--   -
               SCOP domains d2dsob_ B: automated matches                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhh.....hhhhh.eee.eeeeeee.....eeeeee.....eeeee....eeeee......eeeeee.....eeeeee.....eeeee........eeeee.......eeee........eeeeee.....eeeee.........eeeeee......eeeeeeee..eeeeee.....eeeeee....eeeeeee......eeeeeeeeeee.....eeeeeee.....eeeeee...eeeee.....eeeeee..hhhhh......eeee.....eeeeeee.hhhh..eeeeeee.......hhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2dso B   7 DLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCINDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAKGHQSFQFQLE 327
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326 


Chain C from PDB  Type:PROTEIN  Length:323
 aligned with DRP35_STAAM | Q99QV3 from UniProtKB/Swiss-Prot  Length:324

    Alignment length:323
                                                                                                                                                                                                                                                                                                                                                           324 
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322 | 
          DRP35_STAAM     3 SQQDLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAKGHQSFQFQ-   -
               SCOP domains d2dsoc_ C: automated matches                                                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhh.....hhhhh.eee.eeeeeee.....eeeeee.....eeeee....eeeee......eeeeee.....eeeeee.....eeeee........eeeee.......eeee............ee.....eee...........eeeeee......eeeeeeee..eeeeee.....eeeeee....eeeeeee......eeeeeeeeeee.....eeeeeee.....eeeeee...eeeee.....eeeeee..hhhhh......eeee.....eeeeeee.hhhh..eeeeeee.......hhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2dso C   4 SQQDLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCINDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAKGHQSFQFQL 326
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323   


Chain D from PDB  Type:PROTEIN  Length:321
 aligned with DRP35_STAAM | Q99QV3 from UniProtKB/Swiss-Prot  Length:324

    Alignment length:321
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323 
          DRP35_STAAM     4 QQDLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAKGHQSFQFQ 324
               SCOP domains d2dsod_ D: automated matches                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhh.....hhhhh.eee.eeeeeee.....eeeeee.....eeeee....eeeee......eeeeee.....eeeeee.....eeeee........eeeee.......eeee........eeeeee.....eeeee.........eeeeee......eeeeeeee..eeeeee.....eeeeee....eeeeeee......eeeeeeeeeee.....eeeeeee.....eeeeee...eeeee.....eeeeee..hhhhh......eeee.....eeeeeee.hhhh..eeeeeee............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2dso D   5 QQDLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCINDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAKGHQSFQFQ 325
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324 


Chain E from PDB  Type:PROTEIN  Length:321
 aligned with DRP35_STAAM | Q99QV3 from UniProtKB/Swiss-Prot  Length:324

    Alignment length:321
                                                                                                                                                                                                                                                                                                                                                         324 
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324 
          DRP35_STAAM     5 QDLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAKGHQSFQFQ-   -
               SCOP domains d2dsoe_ E: automated matches                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhh.....hhhhh.eee.eeeeeee.....eeeeee.....eeeee....eeeee......eeeeee.....eeeeee.....eeeee........eeeee.......eeee........eeeeee.....eeeee.........eeeeee......eeeeeeee..eeeeee.....eeeeee....eeeeeee......eeeeeeeeeee.....eeeeeee.....eeeeee...eeeee.....eeeeee..hhhhh......eeee.....eeeeeee.hhhh..eeeeeee.......hhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2dso E   6 QDLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCINDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAKGHQSFQFQL 326
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325 


Chain F from PDB  Type:PROTEIN  Length:320
 aligned with DRP35_STAAM | Q99QV3 from UniProtKB/Swiss-Prot  Length:324

    Alignment length:320
                                                                                                                                                                                                                                                                                                                                                        324 
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315        |-
          DRP35_STAAM     6 DLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAKGHQSFQFQ-   -
               SCOP domains d2dsof_ F: automated matches                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhh.....hhhhh.eee.eeeeeee.....eeeeee.....eeeee....eeeee......eeeeee.....eeeeee.....eeeee........eeeee.......eeee........eeeeee.....eeeee.........eeeeee......eeeeeeee..eeeeee.....eeeeee....eeeeeee......eeeeeeeeeee.....eeeeeee.....eeeeee...eeeee.....eeeeee..hhhhh......eeee.....eeeeeee.hhhh..eeeeeee.......hhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2dso F   7 DLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCINDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAKGHQSFQFQL 326
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 6)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2DSO)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2DSO)

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (DRP35_STAAM | Q99QV3)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        DRP35_STAAM | Q99QV3: 2dg0 2dg1

(-) Related Entries Specified in the PDB File

2dg0 WILD TYPE PROTEIN OF THE ENTRY
2dg1 THE COMPLEXED STRUCTURE OF WILD TYPE ENZYME WITH CA2+