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(-) Description

Title :  THE STRUCTURE OF A FAMILY 51 ARABINOFURANOSIDASE, ARAF51, FROM CLOSTRIDIUM THERMOCELLUM IN COMPLEX WITH 1,3-LINKED ARABINOSIDE OF XYLOBIOSE.
 
Authors :  E. J. Taylor, N. L. Smith, J. P. Turkenburg, S. D'Souza, H. J. Gilbert, G. J. Davies
Date :  06 Dec 05  (Deposition) - 14 Dec 05  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.90
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Keywords :  Arabinofuranosidase, Glycosidase, Mechanism, Xylan, Arabinan, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  E. J. Taylor, N. L. Smith, J. P. Turkenburg, S. D'Souza, H. J. Gilbert, G. J. Davies
Structural Insight Into The Ligand Specificity Of A Thermostable Family 51 Arabinofuranosidase, Araf51, From Clostridium Thermocellum.
Biochem. J. V. 395 31 2006
PubMed-ID: 16336192  |  Reference-DOI: 10.1042/BJ20051780

(-) Compounds

Molecule 1 - ALPHA-L-ARABINOFURANOSIDASE
    Atcc27405
    ChainsA, B, C, D, E, F
    EC Number3.2.1.55
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System VectorPET 28A
    MutationYES
    Organism ScientificCLOSTRIDIUM THERMOCELLUM
    Organism Taxid1515
    StrainF1/YS

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit ABCDEF
Biological Unit 1 (1x)A     
Biological Unit 2 (1x) B    
Biological Unit 3 (1x)  C   
Biological Unit 4 (1x)   D  
Biological Unit 5 (1x)    E 
Biological Unit 6 (1x)     F

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 21)

Asymmetric Unit (3, 21)
No.NameCountTypeFull Name
1AHR6Ligand/IonALPHA-L-ARABINOFURANOSE
2EDO9Ligand/Ion1,2-ETHANEDIOL
3XYS6Ligand/IonXYLOPYRANOSE
Biological Unit 1 (3, 4)
No.NameCountTypeFull Name
1AHR1Ligand/IonALPHA-L-ARABINOFURANOSE
2EDO2Ligand/Ion1,2-ETHANEDIOL
3XYS1Ligand/IonXYLOPYRANOSE
Biological Unit 2 (3, 3)
No.NameCountTypeFull Name
1AHR1Ligand/IonALPHA-L-ARABINOFURANOSE
2EDO1Ligand/Ion1,2-ETHANEDIOL
3XYS1Ligand/IonXYLOPYRANOSE
Biological Unit 3 (3, 4)
No.NameCountTypeFull Name
1AHR1Ligand/IonALPHA-L-ARABINOFURANOSE
2EDO2Ligand/Ion1,2-ETHANEDIOL
3XYS1Ligand/IonXYLOPYRANOSE
Biological Unit 4 (3, 3)
No.NameCountTypeFull Name
1AHR1Ligand/IonALPHA-L-ARABINOFURANOSE
2EDO1Ligand/Ion1,2-ETHANEDIOL
3XYS1Ligand/IonXYLOPYRANOSE
Biological Unit 5 (3, 4)
No.NameCountTypeFull Name
1AHR1Ligand/IonALPHA-L-ARABINOFURANOSE
2EDO2Ligand/Ion1,2-ETHANEDIOL
3XYS1Ligand/IonXYLOPYRANOSE
Biological Unit 6 (3, 3)
No.NameCountTypeFull Name
1AHR1Ligand/IonALPHA-L-ARABINOFURANOSE
2EDO1Ligand/Ion1,2-ETHANEDIOL
3XYS1Ligand/IonXYLOPYRANOSE

(-) Sites  (21, 21)

Asymmetric Unit (21, 21)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREPHE A:25 , GLU A:27 , GLY A:71 , ASN A:72 , TRP A:97 , ASN A:172 , TYR A:244 , GLU A:292 , TRP A:296 , GLN A:352 , XYS A:999BINDING SITE FOR RESIDUE AHR A 998
02AC2SOFTWAREASN A:72 , SER A:214 , AHR A:998BINDING SITE FOR RESIDUE XYS A 999
03AC3SOFTWAREGLU B:27 , GLY B:71 , ASN B:72 , ASN B:172 , TYR B:244 , GLU B:292 , LEU B:319 , GLN B:352 , XYS B:999BINDING SITE FOR RESIDUE AHR B 998
04AC4SOFTWAREASN B:72 , TRP B:296 , AHR B:998BINDING SITE FOR RESIDUE XYS B 999
05AC5SOFTWAREGLU C:27 , ASN C:72 , TRP C:97 , ASN C:172 , TYR C:244 , GLU C:292 , TRP C:296 , GLN C:352 , XYS C:999BINDING SITE FOR RESIDUE AHR C 998
06AC6SOFTWAREASN C:72 , TRP C:296 , AHR C:998BINDING SITE FOR RESIDUE XYS C 999
07AC7SOFTWAREGLU D:27 , GLY D:71 , ASN D:72 , TRP D:97 , ASN D:172 , TYR D:244 , GLU D:292 , TRP D:296 , GLN D:352 , XYS D:999BINDING SITE FOR RESIDUE AHR D 998
08AC8SOFTWAREASN D:72 , TRP D:296 , AHR D:998BINDING SITE FOR RESIDUE XYS D 999
09AC9SOFTWAREGLU E:27 , GLY E:71 , ASN E:72 , TRP E:97 , ASN E:172 , TYR E:244 , GLU E:292 , TRP E:296 , GLN E:352 , XYS E:999BINDING SITE FOR RESIDUE AHR E 998
10BC1SOFTWAREASN E:72 , TRP E:178 , TRP E:296 , AHR E:998BINDING SITE FOR RESIDUE XYS E 999
11BC2SOFTWAREGLU F:27 , GLY F:71 , ASN F:72 , TRP F:97 , ASN F:172 , TYR F:244 , GLU F:292 , TRP F:296 , GLN F:352 , XYS F:999BINDING SITE FOR RESIDUE AHR F 998
12BC3SOFTWAREASN F:72 , TRP F:178 , SER F:214 , TRP F:296 , AHR F:998BINDING SITE FOR RESIDUE XYS F 999
13BC4SOFTWAREGLN A:223 , TYR A:275 , TYR D:275BINDING SITE FOR RESIDUE EDO A1503
14BC5SOFTWAREASP A:81 , LYS F:149BINDING SITE FOR RESIDUE EDO A1504
15BC6SOFTWARELYS A:149 , ARG B:92BINDING SITE FOR RESIDUE EDO B1503
16BC7SOFTWAREGLN B:223 , TYR B:275 , GLN C:223 , TYR C:275BINDING SITE FOR RESIDUE EDO C1503
17BC8SOFTWAREASP C:81 , ARG C:92 , LYS E:149BINDING SITE FOR RESIDUE EDO C1504
18BC9SOFTWARELYS C:149 , ASP D:81 , ARG D:92BINDING SITE FOR RESIDUE EDO D1503
19CC1SOFTWARETYR E:275 , TYR F:275BINDING SITE FOR RESIDUE EDO E1503
20CC2SOFTWARELYS D:149 , ASP E:81 , ARG E:92 , HOH E:2040BINDING SITE FOR RESIDUE EDO E1504
21CC3SOFTWARELYS B:149 , PHE F:78 , ASP F:81 , ARG F:92BINDING SITE FOR RESIDUE EDO F1503

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2C8N)

(-) Cis Peptide Bonds  (106, 106)

Asymmetric Unit
No.Residues
1Tyr A:68 -Pro A:69
2Gly A:70 -Gly A:71
3Phe A:221 -Pro A:222
4Met A:307 -Gln A:308
5Ala A:351 -Gln A:352
6Asn A:365 -Gly A:366
7Gly A:366 -Gly A:367
8Gly A:367 -Ala A:368
9Asn A:429 -Arg A:430
10Arg A:430 -Asn A:431
11Asn A:431 -Ile A:432
12Gly A:469 -Glu A:470
13Ser A:477 -Asp A:478
14Ser A:480 -Ser A:481
15Tyr B:68 -Pro B:69
16Gly B:70 -Gly B:71
17Phe B:221 -Pro B:222
18Glu B:310 -Pro B:311
19Ala B:351 -Gln B:352
20Asn B:365 -Gly B:366
21Gly B:366 -Gly B:367
22Gly B:367 -Ala B:368
23Asn B:429 -Arg B:430
24Arg B:430 -Asn B:431
25Asn B:431 -Ile B:432
26Gly B:444 -Met B:445
27Lys B:446 -Asp B:447
28Gly B:469 -Glu B:470
29Asp B:478 -Lys B:479
30Ser B:480 -Ser B:481
31Ser B:489 -Met B:490
32Tyr C:68 -Pro C:69
33Gly C:70 -Gly C:71
34Phe C:221 -Pro C:222
35Glu C:310 -Pro C:311
36Ala C:348 -Cys C:349
37Ala C:351 -Gln C:352
38Arg C:364 -Asn C:365
39Asn C:365 -Gly C:366
40Gly C:366 -Gly C:367
41Gly C:367 -Ala C:368
42Asn C:417 -Glu C:418
43Glu C:418 -Glu C:419
44Lys C:420 -Glu C:421
45Asn C:431 -Ile C:432
46Ile C:432 -His C:433
47Gly C:444 -Met C:445
48Lys C:446 -Asp C:447
49Asp C:460 -Leu C:461
50Asp C:478 -Lys C:479
51Ser C:480 -Ser C:481
52Asp C:483 -Asp C:484
53Gly C:485 -Ile C:486
54Tyr D:68 -Pro D:69
55Gly D:70 -Gly D:71
56Phe D:221 -Pro D:222
57Asn D:309 -Glu D:310
58Glu D:310 -Pro D:311
59Leu D:350 -Ala D:351
60Ala D:351 -Gln D:352
61Gly D:366 -Gly D:367
62Gly D:367 -Ala D:368
63Asn D:429 -Arg D:430
64Arg D:430 -Asn D:431
65Ile D:432 -His D:433
66His D:433 -Glu D:434
67Met D:445 -Lys D:446
68Asp D:447 -Tyr D:448
69Gly D:469 -Glu D:470
70Asp D:478 -Lys D:479
71Ser D:480 -Ser D:481
72Asp D:484 -Gly D:485
73Tyr E:68 -Pro E:69
74Gly E:70 -Gly E:71
75Phe E:221 -Pro E:222
76Asn E:309 -Glu E:310
77Glu E:310 -Pro E:311
78Trp E:312 -Arg E:313
79Leu E:350 -Ala E:351
80Ala E:351 -Gln E:352
81Asn E:365 -Gly E:366
82Gly E:366 -Gly E:367
83Gly E:367 -Ala E:368
84Ala E:368 -Ala E:369
85Arg E:430 -Asn E:431
86His E:433 -Glu E:434
87Arg E:443 -Gly E:444
88Met E:445 -Lys E:446
89Asp E:447 -Tyr E:448
90Glu E:457 -His E:458
91Asn E:468 -Gly E:469
92Glu E:470 -Glu E:471
93Asp E:478 -Lys E:479
94Tyr F:68 -Pro F:69
95Gly F:70 -Gly F:71
96Phe F:221 -Pro F:222
97Met F:307 -Gln F:308
98Glu F:310 -Pro F:311
99Ala F:351 -Gln F:352
100Asn F:365 -Gly F:366
101Gly F:366 -Gly F:367
102Gly F:367 -Ala F:368
103Asn F:429 -Arg F:430
104Arg F:430 -Asn F:431
105Gly F:469 -Glu F:470
106Asp F:478 -Lys F:479

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2C8N)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2C8N)

(-) Exons   (0, 0)

(no "Exon" information available for 2C8N)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:501
 aligned with IABF_CLOTH | A3DIH0 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:501
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501 
           IABF_CLOTH     2 KKARMTVDKDYKIAEIDKRIYGSFVEHLGRAVYDGLYQPGNSKSDEDGFRKDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGTRGISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNEMDGPWQVGHKTMDEYGRIAEETARAMKMIDPSIELVACGSSSKDMPTFPQWEATVLDYAYDYVDYISLHQYYGNKENDTADFLAKSDDLDDFIRSVIATCDYIKAKKRSKKDIYLSFDEWNVWYHSNNEDANIMQNEPWRIAPPLLEDIYTFEDALLVGLMLITLMKHADRIKIACLAQLINVIAPIVTERNGGAAWRQTIFYPFMHASKYGRGIVLQPVINSPLHDTSKHEDVTDIESVAIYNEEKEEVTIFAVNRNIHEDIVLVSDVRGMKDYRLLEHIVLEHQDLKIRNSVNGEEVYPKNSDKSSFDDGILTSMLRRASWNVIRIG 502
               SCOP domains d2c8na1        d2c8na2 A:17-386 Alpha-L-arabinofuranosidase, catalytic domain                                                                                                                                                                                                                                                                                                                    d2c8na1 A:2-16,A:387-502 Alpha-l-arabinofuranosidase                                                                 SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee....eeee.hhhhheee.........................hhhhhhhhhhhh..eeee..hhhhhhhhhhhhh.hhhhh..eee....eee....hhhhhhhhhhhh..eeeee......hhhhhhhhhhhhhh...hhhhhhhhhh.........eeee.............hhhhhhhhhhhhhhhhhhhh...eeee...........hhhhhhhhhhhhhhh.eeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeeee...hhhhhhhhh................hhhhhhhhhhhhhhhhhh...eeeeeee........ee........ee..hhhhhhhhhhhh..eee..eee..ee.......ee..eeeeeee....eeeeeeee......eeeeeee.......eeeeeee..................eee........eeeeee...eeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c8n A   2 KKARMTVDKDYKIAEIDKRIYGSFVEHLGRAVYDGLYQPGNSKSDEDGFRKDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGTRGISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNAMDGPWQVGHKTMDEYGRIAEETARAMKMIDPSIELVACGSSSKDMPTFPQWEATVLDYAYDYVDYISLHQYYGNKENDTADFLAKSDDLDDFIRSVIATCDYIKAKKRSKKDIYLSFDEWNVWYHSNNEDANIMQNEPWRIAPPLLEDIYTFEDALLVGLMLITLMKHADRIKIACLAQLINVIAPIVTERNGGAAWRQTIFYPFMHASKYGRGIVLQPVINSPLHDTSKHEDVTDIESVAIYNEEKEEVTIFAVNRNIHEDIVLVSDVRGMKDYRLLEHIVLEHQDLKIRNSVNGEEVYPKNSDKSSFDDGILTSMLRRASWNVIRIG 502
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501 

Chain B from PDB  Type:PROTEIN  Length:500
 aligned with IABF_CLOTH | A3DIH0 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:500
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502
           IABF_CLOTH     3 KARMTVDKDYKIAEIDKRIYGSFVEHLGRAVYDGLYQPGNSKSDEDGFRKDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGTRGISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNEMDGPWQVGHKTMDEYGRIAEETARAMKMIDPSIELVACGSSSKDMPTFPQWEATVLDYAYDYVDYISLHQYYGNKENDTADFLAKSDDLDDFIRSVIATCDYIKAKKRSKKDIYLSFDEWNVWYHSNNEDANIMQNEPWRIAPPLLEDIYTFEDALLVGLMLITLMKHADRIKIACLAQLINVIAPIVTERNGGAAWRQTIFYPFMHASKYGRGIVLQPVINSPLHDTSKHEDVTDIESVAIYNEEKEEVTIFAVNRNIHEDIVLVSDVRGMKDYRLLEHIVLEHQDLKIRNSVNGEEVYPKNSDKSSFDDGILTSMLRRASWNVIRIG 502
               SCOP domains d2c8nb1       d2c8nb2 B:17-386 Alpha-L-arabinofuranosidase, catalytic domain                                                                                                                                                                                                                                                                                                                    d2c8nb1 B:3-16,B:387-502 Alpha-l-arabinofuranosidase                                                                 SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee....eeee.hhhhheee.........................hhhhhhhhhhhh..eeee..hhhhhhhhhhhhh.hhhhh..eee....eee.....hhhhhhhhhhh..eeeee......hhhhhhhhhhhhhh...hhhhhhhhhh.........eeee.............hhhhhhhhhhhhhhhhhhhh...eeee...........hhhhhhhhhhhh....eeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeeee...hhhhhh...................hhhhhhhhhhhhhhhhhh...eeeeeee........ee........ee..hhhhhhhhhhhh..eee..eee..ee.......ee..eeeeeee....eeeeeeee.......eeeeee.......eeeeeeee............................eeeee....eeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c8n B   3 KARMTVDKDYKIAEIDKRIYGSFVEHLGRAVYDGLYQPGNSKSDEDGFRKDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGTRGISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNAMDGPWQVGHKTMDEYGRIAEETARAMKMIDPSIELVACGSSSKDMPTFPQWEATVLDYAYDYVDYISLHQYYGNKENDTADFLAKSDDLDDFIRSVIATCDYIKAKKRSKKDIYLSFDEWNVWYHSNNEDANIMQNEPWRIAPPLLEDIYTFEDALLVGLMLITLMKHADRIKIACLAQLINVIAPIVTERNGGAAWRQTIFYPFMHASKYGRGIVLQPVINSPLHDTSKHEDVTDIESVAIYNEEKEEVTIFAVNRNIHEDIVLVSDVRGMKDYRLLEHIVLEHQDLKIRNSVNGEEVYPKNSDKSSFDDGILTSMLRRASWNVIRIG 502
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502

Chain C from PDB  Type:PROTEIN  Length:499
 aligned with IABF_CLOTH | A3DIH0 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:499
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493         
           IABF_CLOTH     4 ARMTVDKDYKIAEIDKRIYGSFVEHLGRAVYDGLYQPGNSKSDEDGFRKDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGTRGISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNEMDGPWQVGHKTMDEYGRIAEETARAMKMIDPSIELVACGSSSKDMPTFPQWEATVLDYAYDYVDYISLHQYYGNKENDTADFLAKSDDLDDFIRSVIATCDYIKAKKRSKKDIYLSFDEWNVWYHSNNEDANIMQNEPWRIAPPLLEDIYTFEDALLVGLMLITLMKHADRIKIACLAQLINVIAPIVTERNGGAAWRQTIFYPFMHASKYGRGIVLQPVINSPLHDTSKHEDVTDIESVAIYNEEKEEVTIFAVNRNIHEDIVLVSDVRGMKDYRLLEHIVLEHQDLKIRNSVNGEEVYPKNSDKSSFDDGILTSMLRRASWNVIRIG 502
               SCOP domains d2c8nc1      d2c8nc2 C:17-386 Alpha-L-arabinofuranosidase, catalytic domain                                                                                                                                                                                                                                                                                                                    d2c8nc1 C:4-16,C:387-502 Alpha-l-arabinofuranosidase                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee....eeee.hhhhheee.........................hhhhhhhhhhhh..eeee..hhhhhhhhhhhhh........eee....eee....hhhhhhhhhhhh..eeeeee.....hhhhhhhhhhhhhh...hhhhhhhhhh.........eeee.............hhhhhhhhhhhhhhhhhhhh...eeee...........hhhhhhhhhhhh....eeeeeeee.....hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeeee...hhhhhhhhh................hhhhhhhhhhhhhhhhhh.......eee........ee........ee..hhhhhhhhhhhh..eee..eee..ee.......ee.eeeeeeee....eeeeeeee......eeeeeee.......eeeeeee..................ee..........eeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c8n C   4 ARMTVDKDYKIAEIDKRIYGSFVEHLGRAVYDGLYQPGNSKSDEDGFRKDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGTRGISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNAMDGPWQVGHKTMDEYGRIAEETARAMKMIDPSIELVACGSSSKDMPTFPQWEATVLDYAYDYVDYISLHQYYGNKENDTADFLAKSDDLDDFIRSVIATCDYIKAKKRSKKDIYLSFDEWNVWYHSNNEDANIMQNEPWRIAPPLLEDIYTFEDALLVGLMLITLMKHADRIKIACLAQLINVIAPIVTERNGGAAWRQTIFYPFMHASKYGRGIVLQPVINSPLHDTSKHEDVTDIESVAIYNEEKEEVTIFAVNRNIHEDIVLVSDVRGMKDYRLLEHIVLEHQDLKIRNSVNGEEVYPKNSDKSSFDDGILTSMLRRASWNVIRIG 502
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493         

Chain D from PDB  Type:PROTEIN  Length:498
 aligned with IABF_CLOTH | A3DIH0 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:499
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493         
           IABF_CLOTH     4 ARMTVDKDYKIAEIDKRIYGSFVEHLGRAVYDGLYQPGNSKSDEDGFRKDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGTRGISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNEMDGPWQVGHKTMDEYGRIAEETARAMKMIDPSIELVACGSSSKDMPTFPQWEATVLDYAYDYVDYISLHQYYGNKENDTADFLAKSDDLDDFIRSVIATCDYIKAKKRSKKDIYLSFDEWNVWYHSNNEDANIMQNEPWRIAPPLLEDIYTFEDALLVGLMLITLMKHADRIKIACLAQLINVIAPIVTERNGGAAWRQTIFYPFMHASKYGRGIVLQPVINSPLHDTSKHEDVTDIESVAIYNEEKEEVTIFAVNRNIHEDIVLVSDVRGMKDYRLLEHIVLEHQDLKIRNSVNGEEVYPKNSDKSSFDDGILTSMLRRASWNVIRIG 502
               SCOP domains d2c8nd1      d2c8nd2 D:17-386 Alpha-L-arabinofuranosidase, catalytic domain                                                                                                                                                                                                                                                                                                                    d2c8nd1 D:4-16,D:387-502 Alpha-l-arabinofuranosidase                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee....eeee.hhhhheee.........................hhhhhhhhhhhh..eeee..hhhhhhhhhhhhh........eee....eee.....hhhhhhhhhhh..eeeeee.....hhhhhhhhhhhhhh...hhhhhhhhhh.........eeee.............hhhhhhhhhhhhhhhhhhhh...eeee...........hhhhhhhhhhhhhhh.eeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeeee...hhhhhhhh.................hhhhhhhhhhhhhhhhhh...eeeeeee........eee......eee..hhhhhhhhhhhh..eee..eee..ee.......ee..eeeeeee....eeeeeee.......eeeeeee......eeeeeeee..................ee..........-.eee....eeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c8n D   4 ARMTVDKDYKIAEIDKRIYGSFVEHLGRAVYDGLYQPGNSKSDEDGFRKDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGTRGISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNAMDGPWQVGHKTMDEYGRIAEETARAMKMIDPSIELVACGSSSKDMPTFPQWEATVLDYAYDYVDYISLHQYYGNKENDTADFLAKSDDLDDFIRSVIATCDYIKAKKRSKKDIYLSFDEWNVWYHSNNEDANIMQNEPWRIAPPLLEDIYTFEDALLVGLMLITLMKHADRIKIACLAQLINVIAPIVTERNGGAAWRQTIFYPFMHASKYGRGIVLQPVINSPLHDTSKHEDVTDIESVAIYNEEKEEVTIFAVNRNIHEDIVLVSDVRGMKDYRLLEHIVLEHQDLKIRNSVNGEEVYPKNSDKSSFDDGI-TSMLRRASWNVIRIG 502
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483  | |  493         
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            486 |              
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              488              

Chain E from PDB  Type:PROTEIN  Length:497
 aligned with IABF_CLOTH | A3DIH0 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:500
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502
           IABF_CLOTH     3 KARMTVDKDYKIAEIDKRIYGSFVEHLGRAVYDGLYQPGNSKSDEDGFRKDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGTRGISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNEMDGPWQVGHKTMDEYGRIAEETARAMKMIDPSIELVACGSSSKDMPTFPQWEATVLDYAYDYVDYISLHQYYGNKENDTADFLAKSDDLDDFIRSVIATCDYIKAKKRSKKDIYLSFDEWNVWYHSNNEDANIMQNEPWRIAPPLLEDIYTFEDALLVGLMLITLMKHADRIKIACLAQLINVIAPIVTERNGGAAWRQTIFYPFMHASKYGRGIVLQPVINSPLHDTSKHEDVTDIESVAIYNEEKEEVTIFAVNRNIHEDIVLVSDVRGMKDYRLLEHIVLEHQDLKIRNSVNGEEVYPKNSDKSSFDDGILTSMLRRASWNVIRIG 502
               SCOP domains d2c8ne1       d2c8ne2 E:17-386 Alpha-L-arabinofuranosidase, catalytic domain                                                                                                                                                                                                                                                                                                                    d2c8ne1 E:3-16,E:387-502 Alpha-l-arabinofuranosidase                                                                 SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee...eeee.hhhhheee.........................hhhhhhhhhhhh..eeee..hhhhhhhhhhhhh.hhhhh..eee....eee.....hhhhhhhhhhh..eeeee......hhhhhhhhhhhhhh...hhhhhhhhhh.........eee..............hhhhhhhhhhhhhhhhhhhh...eeee...........hhhhhhhhhhhhhhh.eeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeeee...hhhhhhhhh................hhhhhhhhhhhhhhhhhh...eee.eee........ee........ee..hhhhhhhhhhhh..eee.......ee.......ee.eeeeeeee....eeeeeeee......eeeeeeee........eeee........................ee.---.eeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c8n E   3 KARMTVDKDYKIAEIDKRIYGSFVEHLGRAVYDGLYQPGNSKSDEDGFRKDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGTRGISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNAMDGPWQVGHKTMDEYGRIAEETARAMKMIDPSIELVACGSSSKDMPTFPQWEATVLDYAYDYVDYISLHQYYGNKENDTADFLAKSDDLDDFIRSVIATCDYIKAKKRSKKDIYLSFDEWNVWYHSNNEDANIMQNEPWRIAPPLLEDIYTFEDALLVGLMLITLMKHADRIKIACLAQLINVIAPIVTERNGGAAWRQTIFYPFMHASKYGRGIVLQPVINSPLHDTSKHEDVTDIESVAIYNEEKEEVTIFAVNRNIHEDIVLVSDVRGMKDYRLLEHIVLEHQDLKIRNSVNGEEVYPKNSDKSSF---ILTSMLRRASWNVIRIG 502
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482   |   492       502
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         482 486                

Chain F from PDB  Type:PROTEIN  Length:500
 aligned with IABF_CLOTH | A3DIH0 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:500
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502
           IABF_CLOTH     3 KARMTVDKDYKIAEIDKRIYGSFVEHLGRAVYDGLYQPGNSKSDEDGFRKDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGTRGISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNEMDGPWQVGHKTMDEYGRIAEETARAMKMIDPSIELVACGSSSKDMPTFPQWEATVLDYAYDYVDYISLHQYYGNKENDTADFLAKSDDLDDFIRSVIATCDYIKAKKRSKKDIYLSFDEWNVWYHSNNEDANIMQNEPWRIAPPLLEDIYTFEDALLVGLMLITLMKHADRIKIACLAQLINVIAPIVTERNGGAAWRQTIFYPFMHASKYGRGIVLQPVINSPLHDTSKHEDVTDIESVAIYNEEKEEVTIFAVNRNIHEDIVLVSDVRGMKDYRLLEHIVLEHQDLKIRNSVNGEEVYPKNSDKSSFDDGILTSMLRRASWNVIRIG 502
               SCOP domains d2c8nf1       d2c8nf2 F:17-386 Alpha-L-arabinofuranosidase, catalytic domain                                                                                                                                                                                                                                                                                                                    d2c8nf1 F:3-16,F:387-502 Alpha-l-arabinofuranosidase                                                                 SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee....eeee.hhhhheee.........................hhhhhhhhhhhh..eeee....hhhhhhhhhhh.hhhhh..eee....eee....hhhhhhhhhhhh..eeeeee.....hhhhhhhhhhhhhh...hhhhhhhhhh.........eeee.............hhhhhhhhhhhhhhhhhhhh...eeee...........hhhhhhhhhhhh....eeeeeeee.....hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeeee.....hhhhh..................hhhhhhhhhhhhhhhhhh...eeeeeee........ee........ee..hhhhhhhhhhhh..eee..eee..ee.......ee..eeeeeee....eeeeeee.......eeeeeee.......eeeeeee..................ee...eeee..eeeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c8n F   3 KARMTVDKDYKIAEIDKRIYGSFVEHLGRAVYDGLYQPGNSKSDEDGFRKDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGTRGISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNAMDGPWQVGHKTMDEYGRIAEETARAMKMIDPSIELVACGSSSKDMPTFPQWEATVLDYAYDYVDYISLHQYYGNKENDTADFLAKSDDLDDFIRSVIATCDYIKAKKRSKKDIYLSFDEWNVWYHSNNEDANIMQNEPWRIAPPLLEDIYTFEDALLVGLMLITLMKHADRIKIACLAQLINVIAPIVTERNGGAAWRQTIFYPFMHASKYGRGIVLQPVINSPLHDTSKHEDVTDIESVAIYNEEKEEVTIFAVNRNIHEDIVLVSDVRGMKDYRLLEHIVLEHQDLKIRNSVNGEEVYPKNSDKSSFDDGILTSMLRRASWNVIRIG 502
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 12)

Asymmetric Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2C8N)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2C8N)

(-) Gene Ontology  (8, 8)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (IABF_CLOTH | A3DIH0)
molecular function
    GO:0046556    alpha-L-arabinofuranosidase activity    Catalysis of the hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016798    hydrolase activity, acting on glycosyl bonds    Catalysis of the hydrolysis of any glycosyl bond.
biological process
    GO:0046373    L-arabinose metabolic process    The chemical reactions and pathways involving L-arabinose, the D-enantiomer of arabino-pentose. L-arabinose occurs free, e.g. in the heartwood of many conifers, and in the combined state, in both furanose and pyranose forms, as a constituent of various plant hemicelluloses, bacterial polysaccharides etc.
    GO:0031222    arabinan catabolic process    The chemical reactions and pathways resulting in the breakdown of arabinan, a polysaccharide composed of arabinose residues.
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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  Cis Peptide Bonds
    Ala A:351 - Gln A:352   [ RasMol ]  
    Ala B:351 - Gln B:352   [ RasMol ]  
    Ala C:348 - Cys C:349   [ RasMol ]  
    Ala C:351 - Gln C:352   [ RasMol ]  
    Ala D:351 - Gln D:352   [ RasMol ]  
    Ala E:351 - Gln E:352   [ RasMol ]  
    Ala E:368 - Ala E:369   [ RasMol ]  
    Ala F:351 - Gln F:352   [ RasMol ]  
    Arg A:430 - Asn A:431   [ RasMol ]  
    Arg B:430 - Asn B:431   [ RasMol ]  
    Arg C:364 - Asn C:365   [ RasMol ]  
    Arg D:430 - Asn D:431   [ RasMol ]  
    Arg E:430 - Asn E:431   [ RasMol ]  
    Arg E:443 - Gly E:444   [ RasMol ]  
    Arg F:430 - Asn F:431   [ RasMol ]  
    Asn A:365 - Gly A:366   [ RasMol ]  
    Asn A:429 - Arg A:430   [ RasMol ]  
    Asn A:431 - Ile A:432   [ RasMol ]  
    Asn B:365 - Gly B:366   [ RasMol ]  
    Asn B:429 - Arg B:430   [ RasMol ]  
    Asn B:431 - Ile B:432   [ RasMol ]  
    Asn C:365 - Gly C:366   [ RasMol ]  
    Asn C:417 - Glu C:418   [ RasMol ]  
    Asn C:431 - Ile C:432   [ RasMol ]  
    Asn D:309 - Glu D:310   [ RasMol ]  
    Asn D:429 - Arg D:430   [ RasMol ]  
    Asn E:309 - Glu E:310   [ RasMol ]  
    Asn E:365 - Gly E:366   [ RasMol ]  
    Asn E:468 - Gly E:469   [ RasMol ]  
    Asn F:365 - Gly F:366   [ RasMol ]  
    Asn F:429 - Arg F:430   [ RasMol ]  
    Asp B:478 - Lys B:479   [ RasMol ]  
    Asp C:460 - Leu C:461   [ RasMol ]  
    Asp C:478 - Lys C:479   [ RasMol ]  
    Asp C:483 - Asp C:484   [ RasMol ]  
    Asp D:447 - Tyr D:448   [ RasMol ]  
    Asp D:478 - Lys D:479   [ RasMol ]  
    Asp D:484 - Gly D:485   [ RasMol ]  
    Asp E:447 - Tyr E:448   [ RasMol ]  
    Asp E:478 - Lys E:479   [ RasMol ]  
    Asp F:478 - Lys F:479   [ RasMol ]  
    Glu B:310 - Pro B:311   [ RasMol ]  
    Glu C:310 - Pro C:311   [ RasMol ]  
    Glu C:418 - Glu C:419   [ RasMol ]  
    Glu D:310 - Pro D:311   [ RasMol ]  
    Glu E:310 - Pro E:311   [ RasMol ]  
    Glu E:457 - His E:458   [ RasMol ]  
    Glu E:470 - Glu E:471   [ RasMol ]  
    Glu F:310 - Pro F:311   [ RasMol ]  
    Gly A:366 - Gly A:367   [ RasMol ]  
    Gly A:367 - Ala A:368   [ RasMol ]  
    Gly A:469 - Glu A:470   [ RasMol ]  
    Gly A:70 - Gly A:71   [ RasMol ]  
    Gly B:366 - Gly B:367   [ RasMol ]  
    Gly B:367 - Ala B:368   [ RasMol ]  
    Gly B:444 - Met B:445   [ RasMol ]  
    Gly B:469 - Glu B:470   [ RasMol ]  
    Gly B:70 - Gly B:71   [ RasMol ]  
    Gly C:366 - Gly C:367   [ RasMol ]  
    Gly C:367 - Ala C:368   [ RasMol ]  
    Gly C:444 - Met C:445   [ RasMol ]  
    Gly C:485 - Ile C:486   [ RasMol ]  
    Gly C:70 - Gly C:71   [ RasMol ]  
    Gly D:366 - Gly D:367   [ RasMol ]  
    Gly D:367 - Ala D:368   [ RasMol ]  
    Gly D:469 - Glu D:470   [ RasMol ]  
    Gly D:70 - Gly D:71   [ RasMol ]  
    Gly E:366 - Gly E:367   [ RasMol ]  
    Gly E:367 - Ala E:368   [ RasMol ]  
    Gly E:70 - Gly E:71   [ RasMol ]  
    Gly F:366 - Gly F:367   [ RasMol ]  
    Gly F:367 - Ala F:368   [ RasMol ]  
    Gly F:469 - Glu F:470   [ RasMol ]  
    Gly F:70 - Gly F:71   [ RasMol ]  
    His D:433 - Glu D:434   [ RasMol ]  
    His E:433 - Glu E:434   [ RasMol ]  
    Ile C:432 - His C:433   [ RasMol ]  
    Ile D:432 - His D:433   [ RasMol ]  
    Leu D:350 - Ala D:351   [ RasMol ]  
    Leu E:350 - Ala E:351   [ RasMol ]  
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    Lys C:420 - Glu C:421   [ RasMol ]  
    Lys C:446 - Asp C:447   [ RasMol ]  
    Met A:307 - Gln A:308   [ RasMol ]  
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    Phe A:221 - Pro A:222   [ RasMol ]  
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    Phe F:221 - Pro F:222   [ RasMol ]  
    Ser A:477 - Asp A:478   [ RasMol ]  
    Ser A:480 - Ser A:481   [ RasMol ]  
    Ser B:480 - Ser B:481   [ RasMol ]  
    Ser B:489 - Met B:490   [ RasMol ]  
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    Trp E:312 - Arg E:313   [ RasMol ]  
    Tyr A:68 - Pro A:69   [ RasMol ]  
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2c7f THE STRUCTURE OF A FAMILY 51 ARABINOFURANOSIDASE, ARAF51, FROM CLOSTRIDIUM THERMOCELLUM IN COMPLEX WITH 1,5-ALPHA-L- ARABINOTRIOSE.