2C8C - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Title :   STRUCTURE OF THE ARTT MOTIF Q212A MUTANT C3BOT1 EXOENZYME (NAD-BOUND STATE, CRYSTAL FORM I)

Authors :   E. A. Stura, J. Menetrey, G. Flatau, P. Boquet, A. Menez

Date :   03 Dec 05 (Deposition) - 27 Feb 07 (Release) - 08 Jun 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.70

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)
Biol. Unit 4: D  (1x)

Keywords :   C3 Exoenzyme, Artt Motif, Bacterial Toxins, Glycosyltransferase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. Menetrey, G. Flatau, P. Boquet, A. Menez, E. A. Stura
Structural Basis For The Nad-Hydrolysis Mechanism And The Artt-Loop Plasticity Of C3 Exoenzymes.
Protein Sci. V. 17 878 2008
PubMed-ID: 18369192 | Reference-DOI: 10.1110/PS.073398508
(for further references see the PDB file header)

Molecule 1 - MONO-ADP-RIBOSYLTRANSFERASE C3
	Chains	:	A, B, C, D
	EC Number	:	2.4.2.-
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Strain	:	BL21
	Expression System Taxid	:	511693
	Mutation	:	YES
	Organism Scientific	:	CLOSTRIDIUM BOTULINUM
	Organism Taxid	:	1491
	Synonym	:	EXOENZYME C3

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C
Biological Unit 4 (1x)	:				D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 4)

No.	Name	Count	Type	Full Name
1	ADP	1	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	NAD	3	Ligand/Ion	NICOTINAMIDE-ADENINE-DINUCLEOTIDE

Biological Unit 1 (1, 1)

No.	Name	Count	Type	Full Name
1	ADP	-1	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	NAD	1	Ligand/Ion	NICOTINAMIDE-ADENINE-DINUCLEOTIDE

Biological Unit 2 (1, 1)

No.	Name	Count	Type	Full Name
1	ADP	-1	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	NAD	1	Ligand/Ion	NICOTINAMIDE-ADENINE-DINUCLEOTIDE

Biological Unit 3 (1, 1)

No.	Name	Count	Type	Full Name
1	ADP	-1	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	NAD	1	Ligand/Ion	NICOTINAMIDE-ADENINE-DINUCLEOTIDE

Biological Unit 4 (1, 1)

No.	Name	Count	Type	Full Name
1	ADP	1	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	NAD	-1	Ligand/Ion	NICOTINAMIDE-ADENINE-DINUCLEOTIDE

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	THR A:80 , ASN A:87 , ARG A:91 , ARG A:128 , GLY A:129 , ASP A:130 , ASP A:131 , ALA A:133 , ARG A:167 , GLU A:169 , THR A:175 , SER A:176 , PHE A:183 , ARG A:186 , GLU A:214	BINDING SITE FOR RESIDUE NAD A1248
2	AC2	SOFTWARE	SER B:84 , ASN B:87 , ARG B:91 , ARG B:128 , GLY B:129 , ASP B:130 , ASP B:131 , ALA B:133 , ARG B:167 , GLU B:169 , SER B:174 , PHE B:183 , ARG B:186 , PHE B:209 , GLY B:211 , GLU B:214	BINDING SITE FOR RESIDUE NAD B1248
3	AC3	SOFTWARE	SER C:84 , ASN C:87 , ARG C:91 , ARG C:128 , GLY C:129 , ASP C:130 , ASP C:131 , ALA C:133 , TYR C:134 , ARG C:167 , GLU C:169 , THR C:175 , SER C:176 , PHE C:183 , ARG C:186 , GLU C:214	BINDING SITE FOR RESIDUE NAD C1252
4	AC4	SOFTWARE	ASN D:87 , ARG D:91 , ARG D:128 , ASP D:130 , ASP D:131 , ALA D:133 , ARG D:167 , GLU D:169 , ARG D:186	BINDING SITE FOR RESIDUE ADP D1247

(no "SS Bond" information available for 2C8C)

(no "Cis Peptide Bond" information available for 2C8C)

(no "SAP(SNP)/Variant" information available for 2C8C)

(no "PROSITE Motif" information available for 2C8C)

(no "Exon" information available for 2C8C)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:205
 aligned with ARC3_CBDP | P15879 from UniProtKB/Swiss-Prot  Length:251

    Alignment length:205
                                    53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243     
            ARC3_CBDP    44 NTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGQLEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAI 248
               SCOP domains d2c8ca_ A: automated matches                                                                                                                                                                                  SCOP domains
               CATH domains 2c8cA00 A:44-248 Toxin ADP-ribosyltransferase; Chain A, domain 1                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh.....eeeeeeehhhhhhhhhh..........hhhhhhhhhhhhh..eee....eeee...........eeeeeee......ee.hhhh......eeee....eeeeeeeee......eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c8c A  44 NTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGALEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAI 248
                                    53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243

Chain A from PDB  Type:PROTEIN  Length:205
 aligned with Q7M0L1_CLOBO | Q7M0L1 from UniProtKB/TrEMBL  Length:22

    Alignment length:206
                                           19                                                                                                                                                                                             
                                         18 | 22                                                                                                                                                                                          
                                    13    | | 22         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -      
         Q7M0L1_CLOBO     4 NTYQEFNTNIDQAKA-GNAQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   -
               SCOP domains d2c8ca _ A: automated matches                                                                                                                                                                                  SCOP domains
               CATH domains 2c8cA0 0 A:44-248 Toxin ADP-ribosyltransferase; Chain A, domain 1                                                                                                                                              CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......-.hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh.....eeeeeeehhhhhhhhhh..........hhhhhhhhhhhhh..eee....eeee...........eeeeeee......ee.hhhh......eeee....eeeeeeeee......eeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c8c A  44 NTYQEF-TNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGALEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAI 248
                                 | |52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242      
                                49 |                                                                                                                                                                                                      
                                  50

Chain B from PDB  Type:PROTEIN  Length:205
 aligned with ARC3_CBDP | P15879 from UniProtKB/Swiss-Prot  Length:251

    Alignment length:205
                                    52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242     
            ARC3_CBDP    43 SNTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGQLEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTA 247
               SCOP domains d2c8cb_ B: automated matches                                                                                                                                                                                  SCOP domains
               CATH domains 2c8cB00 B:43-247 Toxin ADP-ribosyltransferase; Chain A, domain 1                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhh........eeeeeeehhhhhh..............hhhhhhhhhhhhh..eeee...eeee...hhhhhh..eeeeeee......ee...........eeee...eeeeeeeeee......eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c8c B  43 SNTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGALEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTA 247
                                    52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242

Chain B from PDB  Type:PROTEIN  Length:205
 aligned with Q7M0L1_CLOBO | Q7M0L1 from UniProtKB/TrEMBL  Length:22

    Alignment length:206
                                            19                                                                                                                                                                                            
                                          18 | 22                                                                                                                                                                                         
                                    12     | |21|        -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -      
         Q7M0L1_CLOBO     3 SNTYQEFNTNIDQAKA-GNAQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   -
               SCOP domains d2c8cb_  B: automated matches                                                                                                                                                                                  SCOP domains
               CATH domains 2c8cB00  B:43-247 Toxin ADP-ribosyltransferase; Chain A, domain 1                                                                                                                                              CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......-.hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhh........eeeeeeehhhhhh..............hhhhhhhhhhhhh..eeee...eeee...hhhhhh..eeeeeee......ee...........eeee...eeeeeeeeee......eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c8c B  43 SNTYQEF-TNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGALEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTA 247
                                  | 51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241      
                                 49 |                                                                                                                                                                                                     
                                   50

Chain C from PDB  Type:PROTEIN  Length:208
 aligned with ARC3_CBDP | P15879 from UniProtKB/Swiss-Prot  Length:251

    Alignment length:208
                                    53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243        
            ARC3_CBDP    44 NTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGQLEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAINPK 251
               SCOP domains d2c8cc_ C: automated matches                                                                                                                                                                                     SCOP domains
               CATH domains 2c8cC00 C:44-251 Toxin ADP-ribosyltransferase; Chain A, domain 1                                                                                                                                                 CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhh........eeeeeeehhhhh...............hhhhhhhhhhhhh..eeee...eeee...hhhhhh..eeeeeee......ee...........eeee...eeeeeeeeee......eeeeeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c8c C  44 NTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGALEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAINPK 251
                                    53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243

Chain C from PDB  Type:PROTEIN  Length:208
 aligned with Q7M0L1_CLOBO | Q7M0L1 from UniProtKB/TrEMBL  Length:22

    Alignment length:209
                                           19                                                                                                                                                                                                
                                         18 | 22                                                                                                                                                                                             
                                    13    | | 22         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         
         Q7M0L1_CLOBO     4 NTYQEFNTNIDQAKA-GNAQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   -
               SCOP domains d2c8cc _ C: automated matches                                                                                                                                                                                     SCOP domains
               CATH domains 2c8cC0 0 C:44-251 Toxin ADP-ribosyltransferase; Chain A, domain 1                                                                                                                                                 CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......-.hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhh........eeeeeeehhhhh...............hhhhhhhhhhhhh..eeee...eeee...hhhhhh..eeeeeee......ee...........eeee...eeeeeeeeee......eeeeeeeeee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c8c C  44 NTYQEF-TNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGALEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAINPK 251
                                 | |52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242         
                                49 |                                                                                                                                                                                                         
                                  50

Chain D from PDB  Type:PROTEIN  Length:204
 aligned with ARC3_CBDP | P15879 from UniProtKB/Swiss-Prot  Length:251

    Alignment length:204
                                    53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243    
            ARC3_CBDP    44 NTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGQLEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTA 247
               SCOP domains d2c8cd_ D: automated matches                                                                                                                                                                                 SCOP domains
               CATH domains 2c8cD00 D:44-247 Toxin ADP-ribosyltransferase; Chain A, domain 1                                                                                                                                             CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh.....eeeeeeehhhhhhhhhh..........hhhhhhhhhhhhh..eeee...eeee...hhhhhh..eeeeeee......ee...........eeee...eeeeeeeeee......eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2c8c D  44 NTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGALEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTA 247
                                    53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243

Chain D from PDB  Type:PROTEIN  Length:204
 aligned with Q7M0L1_CLOBO | Q7M0L1 from UniProtKB/TrEMBL  Length:22

    Alignment length:205
                                           19                                                                                                                                                                                            
                                         18 | 22                                                                                                                                                                                         
                                    13    | | 22         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -     
         Q7M0L1_CLOBO     4 NTYQEFNTNIDQAKA-GNAQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   -
               SCOP domains d2c8cd _ D: automated matches                                                                                                                                                                                 SCOP domains
               CATH domains 2c8cD0 0 D:44-247 Toxin ADP-ribosyltransferase; Chain A, domain 1                                                                                                                                             CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......-.hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh.....eeeeeeehhhhhhhhhh..........hhhhhhhhhhhhh..eeee...eeee...hhhhhh..eeeeeee......ee...........eeee...eeeeeeeeee......eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c8c D  44 NTYQEF-TNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGALEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTA 247
                                 | |52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242     
                                49 |                                                                                                                                                                                                     
                                  50

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: ADP-ribosylation (157)

Superfamily: ADP-ribosylation (157)

Family: ADP-ribosylating toxins (85)

Protein domain: automated matches (21)

Clostridium botulinum [TaxId: 1491] (9)

1a	d2c8ca_	A:
1b	d2c8cb_	B:
1c	d2c8cc_	C:
1d	d2c8cd_	D:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: Alpha-Beta Complex (3881)

Topology: Toxin ADP-ribosyltransferase; Chain A, domain 1 (46)

Homologous Superfamily: Toxin ADP-ribosyltransferase; Chain A, domain 1 (46)

Clostridium botulinum. Organism_taxid: 1491. (11)

1a	2c8cA00	A:44-248
1b	2c8cB00	B:43-247
1c	2c8cD00	D:44-247
1d	2c8cC00	C:44-251

(no "Pfam Domain" information available for 2C8C)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (Q7M0L1_CLOBO | Q7M0L1)

Chain A,B,C,D (ARC3_CBDP | P15879)

molecular function
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
	GO:0016757	transferase activity, transferring glycosyl groups	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).
	GO:0016763	transferase activity, transferring pentosyl groups	Catalysis of the transfer of a pentosyl group from one compound (donor) to another (acceptor).
biological process
	GO:0009405	pathogenesis	The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
	GO:0006471	protein ADP-ribosylation	The transfer, from NAD, of ADP-ribose to protein amino acids.
	GO:0016032	viral process	A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
cellular component
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

Asymmetric Unit
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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 2c8c)

Biological Units
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Access by PDB/NDB ID
	2c8c
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
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	ARC3_CBDP \| P15879
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt
	Q7M0L1_CLOBO \| Q7M0L1
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/TrEMBL

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	2.4.2.-
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

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	(no 'MIM ID' available)
		Disease Information	:	OMIM

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		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
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Access by UniProt ID/Accession number
	ARC3_CBDP \| P15879
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)
	Q7M0L1_CLOBO \| Q7M0L1
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	ARC3_CBDP \| P15879	:	1g24 1gze 1gzf 1uzi 2a78 2a9k 2bov 2c89 2c8a 2c8b 2c8d 2c8e 2c8f 2c8g 2c8h
UniProtKB/TrEMBL
	Q7M0L1_CLOBO \| Q7M0L1	:	2c89 2c8a 2c8d 2c8e 2c8f 2c8h

1g24	THE CRYSTAL STRUCTURE OF EXOENZYME C3 FROM CLOSTRIDIUM BOTULINUM
1gze	STRUCTURE OF THE CLOSTRIDIUM BOTULINUM C3 EXOENZYME (L177C MUTANT)
1gzf	STRUCTURE OF THE CLOSTRIDIUM BOTULINUM C3 EXOENZYME (WILD-TYPE) IN COMPLEX WITH NAD
1uzi	C3 EXOENZYME FROM CLOSTRIDIUM BOTULINUM, TETRAGONAL FORM
2a78	CRYSTAL STRUCTURE OF THE C3BOT-RALA COMPLEX REVEALS A NOVELTYPE OF ACTION OF A BACTERIAL EXOENZYME
2a9k	CRYSTAL STRUCTURE OF THE C3BOT-NAD-RALA COMPLEX REVEALS ANOVEL TYPE OF ACTION OF A BACTERIAL EXOENZYME
2bov	MOLECULAR RECOGNITION OF AN ADP-RIBOSYLATING CLOSTRIDIUM BOTULINUM C3 EXOENZYME BY RALA GTPASE
2c89	STRUCTURE OF THE WILD-TYPE C3BOT1 EXOENZYME (FREE STATE, CRYSTAL FORM I)
2c8a	STRUCTURE OF THE WILD-TYPE C3BOT1 EXOENZYME (NICOTINAMIDE-BOUND STATE, CRYSTAL FORM I)
2c8b	STRUCTURE OF THE ARTT MOTIF Q212A MUTANT C3BOT1 EXOENZYME (FREE STATE, CRYSTAL FORM II)
2c8d	STRUCTURE OF THE ARTT MOTIF Q212A MUTANT C3BOT1 EXOENZYME (FREE STATE, CRYSTAL FORM I)
2c8e	STRUCTURE OF THE ARTT MOTIF E214N MUTANT C3BOT1 EXOENZYME (FREE STATE, CRYSTAL FORM III)
2c8f	STRUCTURE OF THE ARTT MOTIF E214N MUTANT C3BOT1 EXOENZYME (NAD-BOUND STATE, CRYSTAL FORM III)
2c8g	STRUCTURE OF THE PN LOOP Q182A MUTANT C3BOT1 EXOENZYME (FREE STATE, CRYSTAL FORM I)
2c8h	STRUCTURE OF THE PN LOOP Q182A MUTANT C3BOT1 EXOENZYME (NAD-BOUND STATE, CRYSTAL FORM I)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 4)

Sites (4, 4)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 4)

CATH Domains (1, 4)

Pfam Domains (0, 0)

Gene Ontology (7, 7)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File