2AMF - JenaLib

Biol.Unit 1 - manually (Jmol Viewer)

Asym.Unit - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

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Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF 1-PYRROLINE-5-CARBOXYLATE REDUCTASE FROM HUMAN PATHOGEN STREPTOCOCCUS PYOGENES

Authors :   B. Nocek, L. Lezondra, D. Holzle, A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)

Date :   09 Aug 05 (Deposition) - 27 Sep 05 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.20

Chains :   Asym. Unit : A,B,C,D,E
Biol. Unit 1: A,B,C,D,E  (2x)

Keywords :   1-Pyrroline-5-Reductase, Pyrroline-5-Carboxylate Reductase, Pyrroline Reductase, Proline Biosynthesis, Nad(P)Binding Protein, Rossmann Fold, Domain Swapping, Human Pathogen, Streptococcus Pyogenes, Structural Genomics, Mcsg, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   B. Nocek, C. Chang, H. Li, L. Lezondra, D. Holzle, F. Collart, A. Joachimiak
Crystal Structures Of Delta(1)-Pyrroline-5-Carboxylate Reductase From Human Pathogens Neisseria Meningitides And Streptococcus Pyogenes
J. Mol. Biol. V. 354 91 2005
PubMed-ID: 16233902 | Reference-DOI: 10.1016/J.JMB.2005.08.036

Molecule 1 - 1-PYRROLINE-5-CARBOXYLATE REDUCTASE
	Chains	:	A, B, C, D, E
	EC Number	:	1.2.1.5
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	PROC
	Organism Scientific	:	STREPTOCOCCUS PYOGENES
	Organism Taxid	:	160490
	Strain	:	M1 GAS

		1	2	3	4	5
Asymmetric Unit	:	A	B	C	D	E
Biological Unit 1 (2x)	:	A	B	C	D	E

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 15)

No.	Name	Count	Type	Full Name
1	NA	5	Ligand/Ion	SODIUM ION
2	PRO	10	Mod. Amino Acid	PROLINE

Biological Unit 1 (1, 20)

No.	Name	Count	Type	Full Name
1	NA	-1	Ligand/Ion	SODIUM ION
2	PRO	20	Mod. Amino Acid	PROLINE

Asymmetric Unit (15, 15)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLY A:89 , ALA A:253 , LYS A:254 , LEU A:256 , HOH A:4334 , HOH A:4412	BINDING SITE FOR RESIDUE NA A 850
02	AC2	SOFTWARE	GLY B:89 , ALA B:253 , LYS B:254 , LEU B:256 , HOH B:4335 , HOH B:4394	BINDING SITE FOR RESIDUE NA B 851
03	AC3	SOFTWARE	GLY C:89 , ALA C:253 , LYS C:254 , LEU C:256 , HOH C:4332 , HOH C:4411	BINDING SITE FOR RESIDUE NA C 852
04	AC4	SOFTWARE	GLY D:89 , ARG D:94 , ALA D:253 , LYS D:254 , LEU D:256 , HOH D:4485 , HOH D:4486	BINDING SITE FOR RESIDUE NA D 853
05	AC5	SOFTWARE	GLY E:89 , ARG E:94 , ALA E:253 , LYS E:254 , LEU E:256 , HOH E:4412 , HOH E:4419	BINDING SITE FOR RESIDUE NA E 854
06	AC6	SOFTWARE	MET A:11 , MET A:86 , MET A:109 , PRO A:110 , MET A:112 , HOH A:4353 , PRO D:4330 , HOH D:4465	BINDING SITE FOR RESIDUE PRO D 4240
07	AC7	SOFTWARE	GLY A:163 , SER A:164 , ILE D:219 , SER D:221 , GLY D:224 , THR D:225 , THR D:226 , PRO D:4240 , HOH D:4389 , HOH D:4401	BINDING SITE FOR RESIDUE PRO D 4330
08	AC8	SOFTWARE	MET B:11 , MET B:109 , PRO B:110 , SER C:221 , PRO C:4331 , HOH C:4384	BINDING SITE FOR RESIDUE PRO C 4241
09	AC9	SOFTWARE	GLY B:163 , ILE C:219 , SER C:221 , GLY C:224 , THR C:225 , THR C:226 , PRO C:4241 , HOH C:4371 , HOH C:4414	BINDING SITE FOR RESIDUE PRO C 4331
10	BC1	SOFTWARE	ILE B:219 , SER B:221 , PRO B:4332 , HOH B:4409 , MET C:11 , MET C:86 , MET C:109 , PRO C:110 , MET C:112	BINDING SITE FOR RESIDUE PRO B 4242
11	BC2	SOFTWARE	ILE B:219 , SER B:221 , GLY B:224 , THR B:225 , THR B:226 , PRO B:4242 , HOH B:4393 , HOH B:4396 , GLY C:163	BINDING SITE FOR RESIDUE PRO B 4332
12	BC3	SOFTWARE	SER A:221 , PRO A:4333 , HOH A:4377 , MET D:11 , MET D:86 , MET D:109 , PRO D:110	BINDING SITE FOR RESIDUE PRO A 4243
13	BC4	SOFTWARE	ILE A:219 , SER A:221 , GLY A:224 , THR A:225 , THR A:226 , PRO A:4243 , HOH A:4352 , HOH A:4401 , GLY D:163 , SER D:164	BINDING SITE FOR RESIDUE PRO A 4333
14	BC5	SOFTWARE	MET E:11 , MET E:109 , PRO E:110 , MET E:112 , ILE E:219 , SER E:221 , PRO E:4334 , HOH E:4339 , HOH E:4406 , HOH E:4426	BINDING SITE FOR RESIDUE PRO E 4244
15	BC6	SOFTWARE	GLY E:163 , ILE E:219 , SER E:221 , GLY E:224 , THR E:225 , THR E:226 , PRO E:4244 , HOH E:4380 , HOH E:4415	BINDING SITE FOR RESIDUE PRO E 4334

(no "SS Bond" information available for 2AMF)

(no "Cis Peptide Bond" information available for 2AMF)

(no "SAP(SNP)/Variant" information available for 2AMF)

(no "PROSITE Motif" information available for 2AMF)

(no "Exon" information available for 2AMF)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:257
 aligned with Q9A1S9_STRP1 | Q9A1S9 from UniProtKB/TrEMBL  Length:256

    Alignment length:257
                             1                                                                                                                                                                                                                                                               
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       
         Q9A1S9_STRP1     - -MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTIDKAKSL 256
               SCOP domains d2amfa2 A:0-152 Pyrroline-5-carboxylate reductase ProC                                                                                                   d2amfa1 A:153-256 Pyrroline-5-carboxylate reductase ProC                                                 SCOP domains
               CATH domains --2amfA01 A:2-150 NAD(P)-binding Rossmann-like Domain                                                                                                  2amfA02 A:151-256 ProC C-terminal domain-like                                                              CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..hhhhhhhhhhhh....eeeee..hhhhhhhhhhhhh.....hhhhhhhhh.eeee..hhhhhhhhhh.......eee.....hhhhhhhhhh....eeeee.hhhhhhh.eeeeeee....hhhhhhhhhhhhhh.eeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2amf A   0 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTIDKAKSL 256
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249

Chain B from PDB  Type:PROTEIN  Length:257
 aligned with Q9A1S9_STRP1 | Q9A1S9 from UniProtKB/TrEMBL  Length:256

    Alignment length:257
                             1                                                                                                                                                                                                                                                               
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       
         Q9A1S9_STRP1     - -MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTIDKAKSL 256
               SCOP domains d2amfb2 B:0-152 Pyrroline-5-carboxylate reductase ProC                                                                                                   d2amfb1 B:153-256 Pyrroline-5-carboxylate reductase ProC                                                 SCOP domains
               CATH domains --2amfB01 B:2-150 NAD(P)-binding Rossmann-like Domain                                                                                                  2amfB02 B:151-256 ProC C-terminal domain-like                                                              CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..hhhhhhhhhhhh....eeeee..hhhhhhhhhhhhh.....hhhhhhhhh.eeee..hhhhhhhhhh.......eee.....hhhhhhhhhh....eeeee.hhhhhhh.eeeeeee....hhhhhhhhhhhhhh.eeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2amf B   0 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTIDKAKSL 256
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249

Chain C from PDB  Type:PROTEIN  Length:256
 aligned with Q9A1S9_STRP1 | Q9A1S9 from UniProtKB/TrEMBL  Length:256

    Alignment length:256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      
         Q9A1S9_STRP1     1 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTIDKAKSL 256
               SCOP domains d2amfc2 C:1-152 Pyrroline-5-carboxylate reductase ProC                                                                                                  d2amfc1 C:153-256 Pyrroline-5-carboxylate reductase ProC                                                 SCOP domains
               CATH domains -2amfC01 C:2-150 NAD(P)-binding Rossmann-like Domain                                                                                                  2amfC02 C:151-256 ProC C-terminal domain-like                                                              CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee..hhhhhhhhhhhhh....eeee..hhhhhhhhhhhh......hhhhhhhh..eeee..hhhhhhhhhh.......eee.....hhhhhhhhhh....eeeee.hhhhhhh.eeeeeee....hhhhhhhhhhhhhh.eeeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2amf C   1 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTIDKAKSL 256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250

Chain D from PDB  Type:PROTEIN  Length:258
 aligned with Q9A1S9_STRP1 | Q9A1S9 from UniProtKB/TrEMBL  Length:256

    Alignment length:258
                              1                                                                                                                                                                                                                                                               
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248        
         Q9A1S9_STRP1     - --MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTIDKAKSL 256
               SCOP domains d2amfd2 D:-1-152 Pyrroline-5-carboxylate reductase ProC                                                                                                   d2amfd1 D:153-256 Pyrroline-5-carboxylate reductase ProC                                                 SCOP domains
               CATH domains ---2amfD01 D:2-150 NAD(P)-binding Rossmann-like Domain                                                                                                  2amfD02 D:151-256 ProC C-terminal domain-like                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeee..hhhhhhhhhhhh....eeeee..hhhhhhhhhhhhh.....hhhhhhh...eeee..hhhhhhhhhh.......eee.....hhhhhhhhhh....eeeee.hhhhhhh.eeeeeee....hhhhhhhhhhhhhh.eeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2amf D  -1 NAMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTIDKAKSL 256
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248

Chain E from PDB  Type:PROTEIN  Length:259
 aligned with Q9A1S9_STRP1 | Q9A1S9 from UniProtKB/TrEMBL  Length:256

    Alignment length:259
                               1                                                                                                                                                                                                                                                               
                               |     7        17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247         
         Q9A1S9_STRP1     - ---MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTIDKAKSL 256
               SCOP domains d2amfe2 E:-2-152 Pyrroline-5-carboxylate reductase ProC                                                                                                    d2amfe1 E:153-256 Pyrroline-5-carboxylate reductase ProC                                                 SCOP domains
               CATH domains ----2amfE01 E:2-150 NAD(P)-binding Rossmann-like Domain                                                                                                  2amfE02 E:151-256 ProC C-terminal domain-like                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee..hhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhh.....hhhhhhhhh.eeee..hhhhhhhhhh.......eee.....hhhhhhhhhh....eeeee.hhhhhhh.eeeeeee....hhhhhhhhhhhhhh.eeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2amf E  -2 SNAMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTIDKAKSL 256
                                     7        17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: NAD(P)-binding Rossmann-like Domain (1244)

Streptococcus pyogenes m1 gas. Organism_taxid: 160490. Strain: m1 gas. (2)

1a	2amfA01	A:2-150
1b	2amfB01	B:2-150
1c	2amfC01	C:2-150
1d	2amfD01	D:2-150
1e	2amfE01	E:2-150

Class: Mainly Alpha (13335)

Architecture: Orthogonal Bundle (10391)

Topology: ProC C-terminal domain-like fold (3)

Homologous Superfamily: ProC C-terminal domain-like (3)

Streptococcus pyogenes m1 gas. Organism_taxid: 160490. Strain: m1 gas. (2)

2a	2amfA02	A:151-256
2b	2amfB02	B:151-256
2c	2amfC02	C:151-256
2d	2amfD02	D:151-256
2e	2amfE02	E:151-256

(no "Pfam Domain" information available for 2AMF)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E (Q9A1S9_STRP1 | Q9A1S9)

molecular function
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0004735	pyrroline-5-carboxylate reductase activity	Catalysis of the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+.
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
	GO:0006561	proline biosynthetic process	The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Asymmetric Unit
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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 2amf)

Biological Unit
	Complete Structure
		Biological Unit 1	[ Jena3D ]

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	2amf
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		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/TrEMBL
	Q9A1S9_STRP1 \| Q9A1S9	:	2ahr

1yqg	STRUCTURES OF DELTA 1-PYRROLINE-5-CARBOXYLATE REDUCTASE FROM NEISSERIA MENINGITIDES, STREPTOCOCCUS PYOGENES
2ag8	NADP COMPLEX OF PYRROLINE-5-CARBOXYLATE REDUCTASE FROM NEISSERIA MENINGITIDIS
2ahr	CRYSTAL STRUCTURES OF DELTA 1-PYRROLINE-5-CARBOXYLATE REDUCTASE FROM HUMAN PATHOGEN STREPTOCOCCUS PYOGENES RELATED ID: APC28530 RELATED DB: TARGETDB

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 15)

Sites (15, 15)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 10)

CATH Domains (2, 10)

Pfam Domains (0, 0)

Gene Ontology (6, 6)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File