2AHR - JenaLib

Biol.Unit 1 - manually (Jmol Viewer)

Asym.Unit - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Title :   CRYSTAL STRUCTURES OF 1-PYRROLINE-5-CARBOXYLATE REDUCTASE FROM HUMAN PATHOGEN STREPTOCOCCUS PYOGENES

Authors :   B. Nocek, L. Lezondra, D. Holzle, A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)

Date :   28 Jul 05 (Deposition) - 13 Sep 05 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.15

Chains :   Asym. Unit : A,B,C,D,E
Biol. Unit 1: A,B,C,D,E  (2x)
Biol. Unit 2: A,D  (1x)
Biol. Unit 3: B,C  (1x)
Biol. Unit 4: E  (2x)

Keywords :   1-Pyrroline-5-Carboxylate Reductase, Pyrroline-5-Carboxylate Reductase, Pyrroline Reductase, Proline Biosynthesis, Nad(P)Binding Protein, Rossmann Fold, Doain Swapping, Human Pathogen, Streptococcus Pyogenes, Structural Genomics, Mcsg, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   B. Nocek, C. Chang, H. Li, L. Lezondra, D. Holzle, F. Collart, A. Joachimiak
Crystal Structures Of Delta(1)-Pyrroline-5-Carboxylate Reductase From Human Pathogens Neisseria Meningitides And Streptococcus Pyogenes
J. Mol. Biol. V. 354 91 2005
PubMed-ID: 16233902 | Reference-DOI: 10.1016/J.JMB.2005.08.036

Molecule 1 - PUTATIVE PYRROLINE CARBOXYLATE REDUCTASE
	Chains	:	A, B, C, D, E
	EC Number	:	1.5.1.2
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Organism Scientific	:	STREPTOCOCCUS PYOGENES
	Organism Taxid	:	160490
	Strain	:	M1 GAS

		1	2	3	4	5
Asymmetric Unit	:	A	B	C	D	E
Biological Unit 1 (2x)	:	A	B	C	D	E
Biological Unit 2 (1x)	:	A			D
Biological Unit 3 (1x)	:		B	C
Biological Unit 4 (2x)	:					E

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (4, 50)

No.	Name	Count	Type	Full Name
1	FMT	5	Ligand/Ion	FORMIC ACID
2	MSE	35	Mod. Amino Acid	SELENOMETHIONINE
3	NA	5	Ligand/Ion	SODIUM ION
4	NAP	5	Ligand/Ion	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

Biological Unit 1 (3, 90)

No.	Name	Count	Type	Full Name
1	FMT	10	Ligand/Ion	FORMIC ACID
2	MSE	70	Mod. Amino Acid	SELENOMETHIONINE
3	NA	-1	Ligand/Ion	SODIUM ION
4	NAP	10	Ligand/Ion	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

Biological Unit 2 (3, 18)

No.	Name	Count	Type	Full Name
1	FMT	2	Ligand/Ion	FORMIC ACID
2	MSE	14	Mod. Amino Acid	SELENOMETHIONINE
3	NA	-1	Ligand/Ion	SODIUM ION
4	NAP	2	Ligand/Ion	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

Biological Unit 3 (3, 18)

No.	Name	Count	Type	Full Name
1	FMT	2	Ligand/Ion	FORMIC ACID
2	MSE	14	Mod. Amino Acid	SELENOMETHIONINE
3	NA	-1	Ligand/Ion	SODIUM ION
4	NAP	2	Ligand/Ion	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

Biological Unit 4 (3, 18)

No.	Name	Count	Type	Full Name
1	FMT	2	Ligand/Ion	FORMIC ACID
2	MSE	14	Mod. Amino Acid	SELENOMETHIONINE
3	NA	-1	Ligand/Ion	SODIUM ION
4	NAP	2	Ligand/Ion	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

Asymmetric Unit (15, 15)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLY A:89 , ARG A:94 , ALA A:253 , LYS A:254 , LEU A:256 , HOH A:1509 , HOH A:1579	BINDING SITE FOR RESIDUE NA A 1257
02	AC2	SOFTWARE	GLY B:89 , ARG B:94 , ALA B:253 , LYS B:254 , LEU B:256 , HOH B:1511 , HOH B:1566	BINDING SITE FOR RESIDUE NA B 1258
03	AC3	SOFTWARE	GLY C:89 , ALA C:253 , LYS C:254 , LEU C:256 , HOH C:1511 , HOH C:1574	BINDING SITE FOR RESIDUE NA C 1259
04	AC4	SOFTWARE	GLY D:89 , ARG D:94 , ALA D:253 , LYS D:254 , LEU D:256 , HOH D:1656 , HOH D:1657	BINDING SITE FOR RESIDUE NA D 1260
05	AC5	SOFTWARE	GLY E:89 , ARG E:94 , ALA E:253 , LYS E:254 , LEU E:256 , HOH E:1583 , HOH E:1590	BINDING SITE FOR RESIDUE NA E 1261
06	AC6	SOFTWARE	GLY A:7 , VAL A:8 , GLY A:9 , LYS A:10 , MSE A:11 , GLY A:30 , SER A:31 , ARG A:35 , HIS A:51 , GLY A:64 , ILE A:65 , LYS A:66 , PRO A:67 , LEU A:69 , VAL A:73 , MSE A:86 , ALA A:87 , ALA A:88 , MSE A:109 , PRO A:110 , MSE A:112 , HOH A:1527 , HOH A:1529 , HOH A:1574 , HOH A:1578 , HOH A:1605 , HOH A:1635 , HOH A:1637 , HOH A:1646 , ALA D:218 , ILE D:219 , SER D:221 , HOH D:1637	BINDING SITE FOR RESIDUE NAP A 1500
07	AC7	SOFTWARE	GLY B:7 , VAL B:8 , GLY B:9 , LYS B:10 , MSE B:11 , GLY B:30 , SER B:31 , ARG B:35 , HIS B:51 , GLY B:64 , ILE B:65 , LYS B:66 , PRO B:67 , LEU B:69 , MSE B:86 , ALA B:87 , ALA B:88 , MSE B:109 , PRO B:110 , HOH B:1520 , HOH B:1535 , HOH B:1586 , HOH B:1589 , HOH B:1632 , ILE C:219 , SER C:221	BINDING SITE FOR RESIDUE NAP B 1501
08	AC8	SOFTWARE	ALA B:218 , ILE B:219 , SER B:221 , PRO B:222 , HOH B:1628 , VAL C:8 , GLY C:9 , LYS C:10 , MSE C:11 , GLY C:30 , SER C:31 , ARG C:35 , HIS C:51 , GLY C:64 , ILE C:65 , LYS C:66 , PRO C:67 , VAL C:73 , MSE C:86 , ALA C:87 , ALA C:88 , MSE C:109 , PRO C:110 , MSE C:112 , HOH C:1525 , HOH C:1533 , HOH C:1580 , HOH C:1601	BINDING SITE FOR RESIDUE NAP C 1502
09	AC9	SOFTWARE	ALA A:218 , ILE A:219 , SER A:221 , GLY D:7 , VAL D:8 , GLY D:9 , LYS D:10 , MSE D:11 , GLY D:30 , SER D:31 , ARG D:35 , HIS D:51 , GLY D:64 , ILE D:65 , LYS D:66 , PRO D:67 , LEU D:69 , VAL D:73 , MSE D:86 , ALA D:87 , ALA D:88 , MSE D:109 , PRO D:110 , MSE D:112 , HOH D:1517 , HOH D:1520 , HOH D:1521 , HOH D:1577 , HOH D:1594 , HOH D:1614 , HOH D:1617 , HOH D:1648 , HOH D:1660	BINDING SITE FOR RESIDUE NAP D 1503
10	BC1	SOFTWARE	GLY E:7 , GLY E:9 , LYS E:10 , MSE E:11 , GLY E:30 , SER E:31 , ARG E:35 , HIS E:51 , GLY E:64 , ILE E:65 , LYS E:66 , PRO E:67 , LEU E:69 , MSE E:86 , ALA E:87 , ALA E:88 , MSE E:109 , PRO E:110 , MSE E:112 , ILE E:219 , SER E:221 , HOH E:1517 , HOH E:1554 , HOH E:1596 , HOH E:1606 , HOH E:1629 , HOH E:1632 , HOH E:1633 , HOH E:1664	BINDING SITE FOR RESIDUE NAP E 1504
11	BC2	SOFTWARE	ASP A:251 , LYS A:254	BINDING SITE FOR RESIDUE FMT A 1508
12	BC3	SOFTWARE	ILE B:250 , ASP B:251 , LYS B:254	BINDING SITE FOR RESIDUE FMT B 1509
13	BC4	SOFTWARE	ASN B:183 , ILE C:250 , ASP C:251 , LYS C:254	BINDING SITE FOR RESIDUE FMT C 1510
14	BC5	SOFTWARE	ILE D:250 , ASP D:251 , LYS D:254	BINDING SITE FOR RESIDUE FMT D 1511
15	BC6	SOFTWARE	ILE E:250 , ASP E:251 , LYS E:254	BINDING SITE FOR RESIDUE FMT E 1512

(no "SS Bond" information available for 2AHR)

Asymmetric Unit

No.	Residues
1	Pro C:23	-	His C:24

(no "SAP(SNP)/Variant" information available for 2AHR)

(no "PROSITE Motif" information available for 2AHR)

(no "Exon" information available for 2AHR)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:257
 aligned with Q9A1S9_STRP1 | Q9A1S9 from UniProtKB/TrEMBL  Length:256

    Alignment length:257
                             1                                                                                                                                                                                                                                                               
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       
         Q9A1S9_STRP1     - -MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTIDKAKSL 256
               SCOP domains -d2ahra2 A:1-152 Pyrroline-5-carboxylate reductase ProC                                                                                                  d2ahra1 A:153-256 Pyrroline-5-carboxylate reductase ProC                                                 SCOP domains
               CATH domains --2ahrA01 A:2-150 NAD(P)-binding Rossmann-like Domain                                                                                                  2ahrA02 A:151-256 ProC C-terminal domain-like                                                              CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..hhhhhhhhhhhh....eeeee..hhhhhhhhhhhhh.....hhhhhhhh..eeee..hhhhhhhhhh.......eee.....hhhhhhhhhh....eeeee.hhhhhhh.eeeeeee....hhhhhhhhhhhhhh.eeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ahr A   0 AmKIGIIGVGKmASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAmSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISmAAGISLQRLATFVGQDLPLLRImPNmNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLmELERLGLTATVSSAIDKTIDKAKSL 256
                             |       9 |      19        29        39        49        59        69        79      | 89        99       109  |    119       129       139       149       159       169       179       189       199       209       219       229 |     239       249       
                             |        11-MSE                                49-MSE                               86-MSE                109-MSE                                                                                                                   231-MSE                     
                             1-MSE                                                                                                        112-MSE

Chain B from PDB  Type:PROTEIN  Length:257
 aligned with Q9A1S9_STRP1 | Q9A1S9 from UniProtKB/TrEMBL  Length:256

    Alignment length:257
                             1                                                                                                                                                                                                                                                               
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       
         Q9A1S9_STRP1     - -MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTIDKAKSL 256
               SCOP domains d2ahrb2 B:0-152 Pyrroline-5-carboxylate reductase ProC                                                                                                   d2ahrb1 B:153-256 Pyrroline-5-carboxylate reductase ProC                                                 SCOP domains
               CATH domains --2ahrB01 B:2-150 NAD(P)-binding Rossmann-like Domain                                                                                                  2ahrB02 B:151-256 ProC C-terminal domain-like                                                              CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..hhhhhhhhhhhh....eeeee..hhhhhhhhhhhhh.....hhhhhhhhh.eeee..hhhhhhhhhh.......eee.....hhhhhhhhhh....eeeee.hhhhhhh.eeeeeee....hhhhhhhhhhhhhh.eeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ahr B   0 AmKIGIIGVGKmASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAmSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISmAAGISLQRLATFVGQDLPLLRImPNmNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLmELERLGLTATVSSAIDKTIDKAKSL 256
                             |       9 |      19        29        39        49        59        69        79      | 89        99       109  |    119       129       139       149       159       169       179       189       199       209       219       229 |     239       249       
                             1-MSE    11-MSE                                49-MSE                               86-MSE                109-MSE                                                                                                                   231-MSE                     
                                                                                                                                          112-MSE

Chain C from PDB  Type:PROTEIN  Length:256
 aligned with Q9A1S9_STRP1 | Q9A1S9 from UniProtKB/TrEMBL  Length:256

    Alignment length:256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      
         Q9A1S9_STRP1     1 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTIDKAKSL 256
               SCOP domains d2ahrc2 C:1-152 Pyrroline-5-carboxylate reductase ProC                                                                                                  d2ahrc1 C:153-256 Pyrroline-5-carboxylate reductase ProC                                                 SCOP domains
               CATH domains -2ahrC01 C:2-150 NAD(P)-binding Rossmann-like Domain                                                                                                  2ahrC02 C:151-256 ProC C-terminal domain-like                                                              CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee..hhhhhhhhhhhh.....eeee..hhhhhhhhhhhhh.....hhhhhhhh..eeee..hhhhhhhhhh.......eee.....hhhhhhhhhh....eeeee.hhhhhhh.eeeeeee......hhhhhhhhhhh..eeeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ahr C   1 mKIGIIGVGKmASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAmSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISmAAGISLQRLATFVGQDLPLLRImPNmNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLmELERLGLTATVSSAIDKTIDKAKSL 256
                            |       10|       20        30        40        50        60        70        80     |  90       100       110 |     120       130       140       150       160       170       180       190       200       210       220       230|      240       250      
                            1-MSE    11-MSE                                49-MSE                               86-MSE                109-MSE                                                                                                                   231-MSE                     
                                                                                                                                         112-MSE

Chain D from PDB  Type:PROTEIN  Length:258
 aligned with Q9A1S9_STRP1 | Q9A1S9 from UniProtKB/TrEMBL  Length:256

    Alignment length:258
                              1                                                                                                                                                                                                                                                               
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248        
         Q9A1S9_STRP1     - --MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTIDKAKSL 256
               SCOP domains d2ahrd2 D:-1-152 Pyrroline-5-carboxylate reductase ProC                                                                                                   d2ahrd1 D:153-256 Pyrroline-5-carboxylate reductase ProC                                                 SCOP domains
               CATH domains ---2ahrD01 D:2-150 NAD(P)-binding Rossmann-like Domain                                                                                                  2ahrD02 D:151-256 ProC C-terminal domain-like                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeee..hhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhh.....hhhhhhhh..eeee..hhhhhhhhhh.......eee.....hhhhhhhhhh....eeeee.hhhhhhh.eeeeeee....hhhhhhhhhhhhhh.eeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2ahr D  -1 NAmKIGIIGVGKmASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAmSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISmAAGISLQRLATFVGQDLPLLRImPNmNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLmELERLGLTATVSSAIDKTIDKAKSL 256
                              |      8  |     18        28        38        48|       58        68        78       |88        98       108|  |   118       128       138       148       158       168       178       188       198       208       218       228  |    238       248        
                              1-MSE    11-MSE                                49-MSE                               86-MSE                109-MSE                                                                                                                   231-MSE                     
                                                                                                                                           112-MSE

Chain E from PDB  Type:PROTEIN  Length:259
 aligned with Q9A1S9_STRP1 | Q9A1S9 from UniProtKB/TrEMBL  Length:256

    Alignment length:259
                               1                                                                                                                                                                                                                                                               
                               |     7        17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247         
         Q9A1S9_STRP1     - ---MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTIDKAKSL 256
               SCOP domains d2ahre2 E:-2-152 Pyrroline-5-carboxylate reductase ProC                                                                                                    d2ahre1 E:153-256 Pyrroline-5-carboxylate reductase ProC                                                 SCOP domains
               CATH domains ----2ahrE01 E:2-150 NAD(P)-binding Rossmann-like Domain                                                                                                  2ahrE02 E:151-256 ProC C-terminal domain-like                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee..hhhhhhhhhhhh....eeeee..hhhhhhhhhhhhh.....hhhhhhh...eeee..hhhhhhhhhh.......eee.....hhhhhhhhhh....eeeee.hhhhhhh.eeeeeee....hhhhhhhhhhhhhh.eeeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ahr E  -2 SNAmKIGIIGVGKmASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAmSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISmAAGISLQRLATFVGQDLPLLRImPNmNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLmELERLGLTATVSSAIDKTIDKAKSL 256
                               |     7   |    17        27        37        47 |      57        67        77        87        97       107 |  |  117       127       137       147       157       167       177       187       197       207       217       227   |   237       247         
                               1-MSE    11-MSE                                49-MSE                               86-MSE                109-MSE                                                                                                                   231-MSE                     
                                                                                                                                            112-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: NAD(P)-binding Rossmann-like Domain (1244)

Streptococcus pyogenes m1 gas. Organism_taxid: 160490. Strain: m1 gas. (2)

1a	2ahrA01	A:2-150
1b	2ahrB01	B:2-150
1c	2ahrC01	C:2-150
1d	2ahrD01	D:2-150
1e	2ahrE01	E:2-150

Class: Mainly Alpha (13335)

Architecture: Orthogonal Bundle (10391)

Topology: ProC C-terminal domain-like fold (3)

Homologous Superfamily: ProC C-terminal domain-like (3)

Streptococcus pyogenes m1 gas. Organism_taxid: 160490. Strain: m1 gas. (2)

2a	2ahrA02	A:151-256
2b	2ahrB02	B:151-256
2c	2ahrC02	C:151-256
2d	2ahrD02	D:151-256
2e	2ahrE02	E:151-256

(no "Pfam Domain" information available for 2AHR)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E (Q9A1S9_STRP1 | Q9A1S9)

molecular function
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0004735	pyrroline-5-carboxylate reductase activity	Catalysis of the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+.
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
	GO:0006561	proline biosynthetic process	The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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1yqg	STRUCTURES OF 1-PYRROLINE-5-CARBOXYLATE REDUCTASE FROM NEISSERIA MENINGITIDES
2ag8	STRUCTURES OF 1-PYRROLINE-5-CARBOXYLATE REDUCTASE FROM NEISSERIA MENINGITIDES RELATED ID: APC28530 RELATED DB: TARGETDB

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 50)

Sites (15, 15)

SS Bonds (0, 0)

Cis Peptide Bonds (1, 1)

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Related Entries Specified in the PDB File